data_8Z33 # _model_server_result.job_id yaQWqhr7FDgn60t3Oz7Nag _model_server_result.datetime_utc '2025-06-29 22:06:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8Z33 # _exptl.entry_id 8Z33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.35 _cell.angle_gamma 90 _cell.entry_id 8Z33 _cell.length_a 40.816 _cell.length_b 88.747 _cell.length_c 70.762 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 134 A HIS 313 1_555 C FE FE2 . A FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc2 A OD2 ASP 136 A ASP 315 1_555 C FE FE2 . A FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 A NE2 HIS 195 A HIS 374 1_555 C FE FE2 . A FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc4 C FE FE2 . A FE2 501 1_555 E O1 A1L0W . A A1L0W 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc5 C FE FE2 . A FE2 501 1_555 E O2 A1L0W . A A1L0W 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc6 C FE FE2 . A FE2 501 1_555 I O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc7 B NE2 HIS 134 B HIS 313 1_555 F FE FE2 . B FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc8 B OD2 ASP 136 B ASP 315 1_555 F FE FE2 . B FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc9 B NE2 HIS 195 B HIS 374 1_555 F FE FE2 . B FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc10 F FE FE2 . B FE2 501 1_555 H O2 A1L0W . B A1L0W 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc11 F FE FE2 . B FE2 501 1_555 H O1 A1L0W . B A1L0W 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc12 F FE FE2 . B FE2 501 1_555 J O HOH . B HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Z33 _atom_sites.fract_transf_matrix[1][1] 0.0245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002727 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE2 A 1 501 1 FE2 FE2 . D 3 F A 1 502 1 F F . E 4 A1L0W A 1 503 1 A1L0W IN4 . F 2 FE2 B 1 501 1 FE2 FE2 . G 3 F B 1 502 2 F F . H 4 A1L0W B 1 503 1 A1L0W IN4 . I 5 HOH A 1 601 22 HOH HOH . I 5 HOH A 2 602 5 HOH HOH . I 5 HOH A 3 603 33 HOH HOH . I 5 HOH A 4 604 16 HOH HOH . I 5 HOH A 5 605 2 HOH HOH . I 5 HOH A 6 606 28 HOH HOH . I 5 HOH A 7 607 36 HOH HOH . I 5 HOH A 8 608 25 HOH HOH . I 5 HOH A 9 609 20 HOH HOH . I 5 HOH A 10 610 4 HOH HOH . I 5 HOH A 11 611 11 HOH HOH . I 5 HOH A 12 612 18 HOH HOH . I 5 HOH A 13 613 10 HOH HOH . I 5 HOH A 14 614 15 HOH HOH . I 5 HOH A 15 615 34 HOH HOH . I 5 HOH A 16 616 23 HOH HOH . I 5 HOH A 17 617 35 HOH HOH . I 5 HOH A 18 618 14 HOH HOH . J 5 HOH B 1 601 1 HOH HOH . J 5 HOH B 2 602 31 HOH HOH . J 5 HOH B 3 603 19 HOH HOH . J 5 HOH B 4 604 27 HOH HOH . J 5 HOH B 5 605 7 HOH HOH . J 5 HOH B 6 606 26 HOH HOH . J 5 HOH B 7 607 30 HOH HOH . J 5 HOH B 8 608 6 HOH HOH . J 5 HOH B 9 609 17 HOH HOH . J 5 HOH B 10 610 9 HOH HOH . J 5 HOH B 11 611 8 HOH HOH . J 5 HOH B 12 612 21 HOH HOH . J 5 HOH B 13 613 32 HOH HOH . J 5 HOH B 14 614 37 HOH HOH . J 5 HOH B 15 615 12 HOH HOH . J 5 HOH B 16 616 24 HOH HOH . J 5 HOH B 17 617 13 HOH HOH . J 5 HOH B 18 618 3 HOH HOH . J 5 HOH B 19 619 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.206 _atom_site.Cartn_y 29.01 _atom_site.Cartn_z -17.242 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #