data_8Z4U # _model_server_result.job_id NV1BL2a1E54YF-H5fLoECg _model_server_result.datetime_utc '2025-07-07 19:05:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8Z4U # _exptl.entry_id 8Z4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z4U _cell.length_a 50.84 _cell.length_b 65.58 _cell.length_c 153.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8Z4U _atom_sites.fract_transf_matrix[1][1] 0.01967 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006521 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 602 FAD FAD . C 3 CL A 1 602 1 CL CL . D 4 HOH A 1 701 67 HOH HOH . D 4 HOH A 2 702 98 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 77 HOH HOH . D 4 HOH A 5 705 51 HOH HOH . D 4 HOH A 6 706 80 HOH HOH . D 4 HOH A 7 707 132 HOH HOH . D 4 HOH A 8 708 135 HOH HOH . D 4 HOH A 9 709 106 HOH HOH . D 4 HOH A 10 710 11 HOH HOH . D 4 HOH A 11 711 95 HOH HOH . D 4 HOH A 12 712 127 HOH HOH . D 4 HOH A 13 713 87 HOH HOH . D 4 HOH A 14 714 23 HOH HOH . D 4 HOH A 15 715 134 HOH HOH . D 4 HOH A 16 716 13 HOH HOH . D 4 HOH A 17 717 10 HOH HOH . D 4 HOH A 18 718 1 HOH HOH . D 4 HOH A 19 719 140 HOH HOH . D 4 HOH A 20 720 116 HOH HOH . D 4 HOH A 21 721 84 HOH HOH . D 4 HOH A 22 722 91 HOH HOH . D 4 HOH A 23 723 115 HOH HOH . D 4 HOH A 24 724 89 HOH HOH . D 4 HOH A 25 725 33 HOH HOH . D 4 HOH A 26 726 62 HOH HOH . D 4 HOH A 27 727 12 HOH HOH . D 4 HOH A 28 728 73 HOH HOH . D 4 HOH A 29 729 5 HOH HOH . D 4 HOH A 30 730 37 HOH HOH . D 4 HOH A 31 731 14 HOH HOH . D 4 HOH A 32 732 123 HOH HOH . D 4 HOH A 33 733 48 HOH HOH . D 4 HOH A 34 734 117 HOH HOH . D 4 HOH A 35 735 68 HOH HOH . D 4 HOH A 36 736 128 HOH HOH . D 4 HOH A 37 737 20 HOH HOH . D 4 HOH A 38 738 104 HOH HOH . D 4 HOH A 39 739 60 HOH HOH . D 4 HOH A 40 740 42 HOH HOH . D 4 HOH A 41 741 146 HOH HOH . D 4 HOH A 42 742 38 HOH HOH . D 4 HOH A 43 743 64 HOH HOH . D 4 HOH A 44 744 36 HOH HOH . D 4 HOH A 45 745 133 HOH HOH . D 4 HOH A 46 746 47 HOH HOH . D 4 HOH A 47 747 22 HOH HOH . D 4 HOH A 48 748 97 HOH HOH . D 4 HOH A 49 749 58 HOH HOH . D 4 HOH A 50 750 126 HOH HOH . D 4 HOH A 51 751 141 HOH HOH . D 4 HOH A 52 752 88 HOH HOH . D 4 HOH A 53 753 27 HOH HOH . D 4 HOH A 54 754 144 HOH HOH . D 4 HOH A 55 755 107 HOH HOH . D 4 HOH A 56 756 56 HOH HOH . D 4 HOH A 57 757 130 HOH HOH . D 4 HOH A 58 758 118 HOH HOH . D 4 HOH A 59 759 18 HOH HOH . D 4 HOH A 60 760 63 HOH HOH . D 4 HOH A 61 761 145 HOH HOH . D 4 HOH A 62 762 40 HOH HOH . D 4 HOH A 63 763 83 HOH HOH . D 4 HOH A 64 764 4 HOH HOH . D 4 HOH A 65 765 93 HOH HOH . D 4 HOH A 66 766 17 HOH HOH . D 4 HOH A 67 767 2 HOH HOH . D 4 HOH A 68 768 142 HOH HOH . D 4 HOH A 69 769 94 HOH HOH . D 4 HOH A 70 770 61 HOH HOH . D 4 HOH A 71 771 136 HOH HOH . D 4 HOH A 72 772 112 HOH HOH . D 4 HOH A 73 773 124 HOH HOH . D 4 HOH A 74 774 35 HOH HOH . D 4 HOH A 75 775 39 HOH HOH . D 4 HOH A 76 776 86 HOH HOH . D 4 HOH A 77 777 147 HOH HOH . D 4 HOH A 78 778 28 HOH HOH . D 4 HOH A 79 779 15 HOH HOH . D 4 HOH A 80 780 103 HOH HOH . D 4 HOH A 81 781 113 HOH HOH . D 4 HOH A 82 782 122 HOH HOH . D 4 HOH A 83 783 44 HOH HOH . D 4 HOH A 84 784 29 HOH HOH . D 4 HOH A 85 785 143 HOH HOH . D 4 HOH A 86 786 125 HOH HOH . D 4 HOH A 87 787 78 HOH HOH . D 4 HOH A 88 788 70 HOH HOH . D 4 HOH A 89 789 90 HOH HOH . D 4 HOH A 90 790 120 HOH HOH . D 4 HOH A 91 791 49 HOH HOH . D 4 HOH A 92 792 76 HOH HOH . D 4 HOH A 93 793 24 HOH HOH . D 4 HOH A 94 794 26 HOH HOH . D 4 HOH A 95 795 53 HOH HOH . D 4 HOH A 96 796 32 HOH HOH . D 4 HOH A 97 797 111 HOH HOH . D 4 HOH A 98 798 131 HOH HOH . D 4 HOH A 99 799 137 HOH HOH . D 4 HOH A 100 800 30 HOH HOH . D 4 HOH A 101 801 138 HOH HOH . D 4 HOH A 102 802 105 HOH HOH . D 4 HOH A 103 803 41 HOH HOH . D 4 HOH A 104 804 100 HOH HOH . D 4 HOH A 105 805 54 HOH HOH . D 4 HOH A 106 806 114 HOH HOH . D 4 HOH A 107 807 102 HOH HOH . D 4 HOH A 108 808 119 HOH HOH . D 4 HOH A 109 809 8 HOH HOH . D 4 HOH A 110 810 31 HOH HOH . D 4 HOH A 111 811 6 HOH HOH . D 4 HOH A 112 812 99 HOH HOH . D 4 HOH A 113 813 139 HOH HOH . D 4 HOH A 114 814 75 HOH HOH . D 4 HOH A 115 815 59 HOH HOH . D 4 HOH A 116 816 96 HOH HOH . D 4 HOH A 117 817 16 HOH HOH . D 4 HOH A 118 818 101 HOH HOH . D 4 HOH A 119 819 52 HOH HOH . D 4 HOH A 120 820 108 HOH HOH . D 4 HOH A 121 821 71 HOH HOH . D 4 HOH A 122 822 25 HOH HOH . D 4 HOH A 123 823 9 HOH HOH . D 4 HOH A 124 824 50 HOH HOH . D 4 HOH A 125 825 121 HOH HOH . D 4 HOH A 126 826 79 HOH HOH . D 4 HOH A 127 827 55 HOH HOH . D 4 HOH A 128 828 21 HOH HOH . D 4 HOH A 129 829 57 HOH HOH . D 4 HOH A 130 830 74 HOH HOH . D 4 HOH A 131 831 81 HOH HOH . D 4 HOH A 132 832 109 HOH HOH . D 4 HOH A 133 833 129 HOH HOH . D 4 HOH A 134 834 45 HOH HOH . D 4 HOH A 135 835 82 HOH HOH . D 4 HOH A 136 836 92 HOH HOH . D 4 HOH A 137 837 69 HOH HOH . D 4 HOH A 138 838 34 HOH HOH . D 4 HOH A 139 839 43 HOH HOH . D 4 HOH A 140 840 85 HOH HOH . D 4 HOH A 141 841 72 HOH HOH . D 4 HOH A 142 842 7 HOH HOH . D 4 HOH A 143 843 66 HOH HOH . D 4 HOH A 144 844 110 HOH HOH . D 4 HOH A 145 845 65 HOH HOH . D 4 HOH A 146 846 46 HOH HOH . D 4 HOH A 147 847 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 22.489 -15.103 -19.281 1 2.92 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . B 2 22.92 -15.221 -17.854 1 3.02 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . B 2 22.503 -16.267 -20.188 1 3.81 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . B 2 23.236 -13.913 -20.039 1 2.18 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . B 2 23.805 -12.741 -19.401 1 2.66 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . B 2 23.277 -11.496 -20.068 1 3.54 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . B 2 23.618 -11.488 -21.48 1 2.1 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . B 2 21.764 -11.294 -20.051 1 6.8 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . B 2 21.33 -10.814 -18.784 1 8.34 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . B 2 21.567 -10.327 -21.217 1 4.18 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . B 2 21.847 -8.988 -20.879 1 5.79 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . B 2 22.593 -10.852 -22.214 1 3.92 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . B 2 22.038 -11.817 -23.14 1 3.26 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . B 2 21.873 -13.161 -22.938 1 3.55 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . B 2 21.331 -13.763 -23.97 1 3.85 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . B 2 21.074 -12.752 -24.878 1 4.62 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . B 2 20.476 -12.746 -26.15 1 4.09 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . B 2 19.995 -13.829 -26.756 1 4.06 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . B 2 20.347 -11.549 -26.754 1 4.08 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . B 2 20.823 -10.458 -26.147 1 2.78 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . B 2 21.406 -10.341 -24.958 1 4.41 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . B 2 21.498 -11.539 -24.367 1 4.09 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . B 2 16.76 -10.273 -23.417 1 5.42 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . B 2 16.545 -9.132 -22.72 1 4.55 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . B 2 17.356 -8.756 -21.87 1 4.54 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . B 2 15.422 -8.372 -22.902 1 5.64 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . B 2 14.439 -8.724 -23.787 1 6.21 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . B 2 13.474 -7.985 -23.941 1 9.54 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . B 2 14.596 -9.966 -24.482 1 6.75 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . B 2 13.656 -10.361 -25.304 1 7.08 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . B 2 13.824 -11.589 -25.901 1 8.49 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . B 2 12.814 -12.076 -26.744 1 7.23 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . B 2 12.933 -13.288 -27.37 1 3.81 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . B 2 11.843 -13.753 -28.301 1 3.17 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . B 2 14.087 -14.097 -27.147 1 6.65 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . B 2 14.253 -15.432 -27.836 1 6.11 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . B 2 15.093 -13.612 -26.381 1 4.2 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . B 2 14.991 -12.374 -25.725 1 5.35 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . B 2 15.994 -11.879 -24.893 1 4.52 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . B 2 15.827 -10.676 -24.247 1 4.15 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . B 2 17.312 -12.546 -24.816 1 4.79 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . B 2 17.526 -13.598 -23.775 1 5.01 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . B 2 16.528 -14.595 -23.809 1 4.99 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . B 2 17.677 -12.988 -22.379 1 4.55 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . B 2 18.665 -11.922 -22.386 1 2.75 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . B 2 18.021 -14.044 -21.331 1 4.01 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . B 2 16.953 -14.985 -21.239 1 4.69 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . B 2 18.233 -13.386 -19.988 1 6.44 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . B 2 18.536 -14.386 -19.026 1 2.85 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . B 2 19.866 -14.26 -18.149 1 4.25 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . B 2 20.044 -12.885 -17.63 1 5.72 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . B 2 19.875 -15.398 -17.193 1 1.87 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . B 2 20.984 -14.508 -19.28 1 6.35 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #