data_8Z55 # _model_server_result.job_id 26CJpJBpW0f4dulIUQ03QA _model_server_result.datetime_utc '2024-10-16 12:28:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8Z55 # _exptl.entry_id 8Z55 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z55 _cell.length_a 46.198 _cell.length_b 73.345 _cell.length_c 163.938 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z55 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 6 B SER 121 1_555 B N SLL 7 B SLL 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 B C SLL 7 B SLL 122 1_555 B N GLN 8 B GLN 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A SG CYS 138 A CYS 166 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc2 A SG CYS 141 A CYS 169 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc3 A SG CYS 179 A CYS 207 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 A SG CYS 184 A CYS 212 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Z55 _atom_sites.fract_transf_matrix[1][1] 0.021646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ADP A 1 401 303 ADP NAD . D 4 ZN A 1 402 401 ZN ZN . E 5 HOH A 1 501 136 HOH HOH . E 5 HOH A 2 502 128 HOH HOH . E 5 HOH A 3 503 98 HOH HOH . E 5 HOH A 4 504 29 HOH HOH . E 5 HOH A 5 505 133 HOH HOH . E 5 HOH A 6 506 27 HOH HOH . E 5 HOH A 7 507 63 HOH HOH . E 5 HOH A 8 508 101 HOH HOH . E 5 HOH A 9 509 135 HOH HOH . E 5 HOH A 10 510 40 HOH HOH . E 5 HOH A 11 511 144 HOH HOH . E 5 HOH A 12 512 39 HOH HOH . E 5 HOH A 13 513 120 HOH HOH . E 5 HOH A 14 514 119 HOH HOH . E 5 HOH A 15 515 36 HOH HOH . E 5 HOH A 16 516 34 HOH HOH . E 5 HOH A 17 517 8 HOH HOH . E 5 HOH A 18 518 146 HOH HOH . E 5 HOH A 19 519 107 HOH HOH . E 5 HOH A 20 520 117 HOH HOH . E 5 HOH A 21 521 86 HOH HOH . E 5 HOH A 22 522 7 HOH HOH . E 5 HOH A 23 523 67 HOH HOH . E 5 HOH A 24 524 24 HOH HOH . E 5 HOH A 25 525 100 HOH HOH . E 5 HOH A 26 526 2 HOH HOH . E 5 HOH A 27 527 147 HOH HOH . E 5 HOH A 28 528 65 HOH HOH . E 5 HOH A 29 529 5 HOH HOH . E 5 HOH A 30 530 104 HOH HOH . E 5 HOH A 31 531 3 HOH HOH . E 5 HOH A 32 532 76 HOH HOH . E 5 HOH A 33 533 142 HOH HOH . E 5 HOH A 34 534 71 HOH HOH . E 5 HOH A 35 535 13 HOH HOH . E 5 HOH A 36 536 17 HOH HOH . E 5 HOH A 37 537 61 HOH HOH . E 5 HOH A 38 538 88 HOH HOH . E 5 HOH A 39 539 42 HOH HOH . E 5 HOH A 40 540 154 HOH HOH . E 5 HOH A 41 541 4 HOH HOH . E 5 HOH A 42 542 14 HOH HOH . E 5 HOH A 43 543 96 HOH HOH . E 5 HOH A 44 544 49 HOH HOH . E 5 HOH A 45 545 138 HOH HOH . E 5 HOH A 46 546 111 HOH HOH . E 5 HOH A 47 547 35 HOH HOH . E 5 HOH A 48 548 116 HOH HOH . E 5 HOH A 49 549 58 HOH HOH . E 5 HOH A 50 550 18 HOH HOH . E 5 HOH A 51 551 102 HOH HOH . E 5 HOH A 52 552 137 HOH HOH . E 5 HOH A 53 553 90 HOH HOH . E 5 HOH A 54 554 20 HOH HOH . E 5 HOH A 55 555 72 HOH HOH . E 5 HOH A 56 556 148 HOH HOH . E 5 HOH A 57 557 69 HOH HOH . E 5 HOH A 58 558 79 HOH HOH . E 5 HOH A 59 559 80 HOH HOH . E 5 HOH A 60 560 37 HOH HOH . E 5 HOH A 61 561 126 HOH HOH . E 5 HOH A 62 562 9 HOH HOH . E 5 HOH A 63 563 66 HOH HOH . E 5 HOH A 64 564 57 HOH HOH . E 5 HOH A 65 565 73 HOH HOH . E 5 HOH A 66 566 1 HOH HOH . E 5 HOH A 67 567 89 HOH HOH . E 5 HOH A 68 568 52 HOH HOH . E 5 HOH A 69 569 97 HOH HOH . E 5 HOH A 70 570 16 HOH HOH . E 5 HOH A 71 571 33 HOH HOH . E 5 HOH A 72 572 127 HOH HOH . E 5 HOH A 73 573 84 HOH HOH . E 5 HOH A 74 574 48 HOH HOH . E 5 HOH A 75 575 15 HOH HOH . E 5 HOH A 76 576 25 HOH HOH . E 5 HOH A 77 577 139 HOH HOH . E 5 HOH A 78 578 59 HOH HOH . E 5 HOH A 79 579 103 HOH HOH . E 5 HOH A 80 580 21 HOH HOH . E 5 HOH A 81 581 31 HOH HOH . E 5 HOH A 82 582 47 HOH HOH . E 5 HOH A 83 583 30 HOH HOH . E 5 HOH A 84 584 19 HOH HOH . E 5 HOH A 85 585 92 HOH HOH . E 5 HOH A 86 586 26 HOH HOH . E 5 HOH A 87 587 74 HOH HOH . E 5 HOH A 88 588 105 HOH HOH . E 5 HOH A 89 589 62 HOH HOH . E 5 HOH A 90 590 70 HOH HOH . E 5 HOH A 91 591 41 HOH HOH . E 5 HOH A 92 592 23 HOH HOH . E 5 HOH A 93 593 46 HOH HOH . E 5 HOH A 94 594 51 HOH HOH . E 5 HOH A 95 595 99 HOH HOH . E 5 HOH A 96 596 45 HOH HOH . E 5 HOH A 97 597 6 HOH HOH . E 5 HOH A 98 598 83 HOH HOH . E 5 HOH A 99 599 68 HOH HOH . E 5 HOH A 100 600 115 HOH HOH . E 5 HOH A 101 601 140 HOH HOH . E 5 HOH A 102 602 114 HOH HOH . E 5 HOH A 103 603 10 HOH HOH . E 5 HOH A 104 604 38 HOH HOH . E 5 HOH A 105 605 44 HOH HOH . E 5 HOH A 106 606 155 HOH HOH . E 5 HOH A 107 607 106 HOH HOH . E 5 HOH A 108 608 82 HOH HOH . E 5 HOH A 109 609 125 HOH HOH . E 5 HOH A 110 610 32 HOH HOH . E 5 HOH A 111 611 87 HOH HOH . E 5 HOH A 112 612 78 HOH HOH . E 5 HOH A 113 613 53 HOH HOH . E 5 HOH A 114 614 11 HOH HOH . E 5 HOH A 115 615 55 HOH HOH . E 5 HOH A 116 616 22 HOH HOH . E 5 HOH A 117 617 153 HOH HOH . E 5 HOH A 118 618 50 HOH HOH . E 5 HOH A 119 619 132 HOH HOH . E 5 HOH A 120 620 130 HOH HOH . E 5 HOH A 121 621 94 HOH HOH . E 5 HOH A 122 622 54 HOH HOH . E 5 HOH A 123 623 149 HOH HOH . E 5 HOH A 124 624 131 HOH HOH . E 5 HOH A 125 625 77 HOH HOH . E 5 HOH A 126 626 43 HOH HOH . E 5 HOH A 127 627 110 HOH HOH . E 5 HOH A 128 628 95 HOH HOH . E 5 HOH A 129 629 143 HOH HOH . E 5 HOH A 130 630 129 HOH HOH . E 5 HOH A 131 631 64 HOH HOH . E 5 HOH A 132 632 109 HOH HOH . E 5 HOH A 133 633 75 HOH HOH . E 5 HOH A 134 634 91 HOH HOH . E 5 HOH A 135 635 85 HOH HOH . E 5 HOH A 136 636 141 HOH HOH . E 5 HOH A 137 637 56 HOH HOH . E 5 HOH A 138 638 113 HOH HOH . E 5 HOH A 139 639 28 HOH HOH . E 5 HOH A 140 640 124 HOH HOH . E 5 HOH A 141 641 108 HOH HOH . E 5 HOH A 142 642 81 HOH HOH . E 5 HOH A 143 643 12 HOH HOH . E 5 HOH A 144 644 145 HOH HOH . E 5 HOH A 145 645 152 HOH HOH . E 5 HOH A 146 646 123 HOH HOH . E 5 HOH A 147 647 112 HOH HOH . E 5 HOH A 148 648 121 HOH HOH . E 5 HOH A 149 649 134 HOH HOH . E 5 HOH A 150 650 122 HOH HOH . E 5 HOH A 151 651 150 HOH HOH . E 5 HOH A 152 652 60 HOH HOH . F 5 HOH B 1 301 93 HOH HOH . F 5 HOH B 2 302 151 HOH HOH . F 5 HOH B 3 303 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 9.715 _atom_site.Cartn_y -9.655 _atom_site.Cartn_z 77.22 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #