data_8Z57 # _model_server_result.job_id xGIsefsbOm50B652dcknkw _model_server_result.datetime_utc '2024-10-16 10:36:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z57 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8Z57 # _exptl.entry_id 8Z57 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z57 _cell.length_a 46.084 _cell.length_b 73.043 _cell.length_c 162.457 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z57 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 6 B SER 121 1_555 B N SLL 7 B SLL 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 B C SLL 7 B SLL 122 1_555 B N GLN 8 B GLN 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A SG CYS 138 A CYS 166 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc2 A SG CYS 141 A CYS 169 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc3 A SG CYS 179 A CYS 207 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc4 A SG CYS 184 A CYS 212 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Z57 _atom_sites.fract_transf_matrix[1][1] 0.0217 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006155 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 401 ZN ZN . D 4 ADP A 1 402 303 ADP NAD . E 5 HOH A 1 501 95 HOH HOH . E 5 HOH A 2 502 60 HOH HOH . E 5 HOH A 3 503 61 HOH HOH . E 5 HOH A 4 504 50 HOH HOH . E 5 HOH A 5 505 56 HOH HOH . E 5 HOH A 6 506 26 HOH HOH . E 5 HOH A 7 507 94 HOH HOH . E 5 HOH A 8 508 45 HOH HOH . E 5 HOH A 9 509 59 HOH HOH . E 5 HOH A 10 510 62 HOH HOH . E 5 HOH A 11 511 86 HOH HOH . E 5 HOH A 12 512 38 HOH HOH . E 5 HOH A 13 513 33 HOH HOH . E 5 HOH A 14 514 81 HOH HOH . E 5 HOH A 15 515 83 HOH HOH . E 5 HOH A 16 516 41 HOH HOH . E 5 HOH A 17 517 70 HOH HOH . E 5 HOH A 18 518 21 HOH HOH . E 5 HOH A 19 519 1 HOH HOH . E 5 HOH A 20 520 24 HOH HOH . E 5 HOH A 21 521 72 HOH HOH . E 5 HOH A 22 522 42 HOH HOH . E 5 HOH A 23 523 85 HOH HOH . E 5 HOH A 24 524 98 HOH HOH . E 5 HOH A 25 525 15 HOH HOH . E 5 HOH A 26 526 76 HOH HOH . E 5 HOH A 27 527 12 HOH HOH . E 5 HOH A 28 528 6 HOH HOH . E 5 HOH A 29 529 2 HOH HOH . E 5 HOH A 30 530 75 HOH HOH . E 5 HOH A 31 531 82 HOH HOH . E 5 HOH A 32 532 69 HOH HOH . E 5 HOH A 33 533 8 HOH HOH . E 5 HOH A 34 534 5 HOH HOH . E 5 HOH A 35 535 32 HOH HOH . E 5 HOH A 36 536 80 HOH HOH . E 5 HOH A 37 537 91 HOH HOH . E 5 HOH A 38 538 3 HOH HOH . E 5 HOH A 39 539 7 HOH HOH . E 5 HOH A 40 540 28 HOH HOH . E 5 HOH A 41 541 19 HOH HOH . E 5 HOH A 42 542 53 HOH HOH . E 5 HOH A 43 543 78 HOH HOH . E 5 HOH A 44 544 89 HOH HOH . E 5 HOH A 45 545 67 HOH HOH . E 5 HOH A 46 546 10 HOH HOH . E 5 HOH A 47 547 55 HOH HOH . E 5 HOH A 48 548 48 HOH HOH . E 5 HOH A 49 549 16 HOH HOH . E 5 HOH A 50 550 14 HOH HOH . E 5 HOH A 51 551 37 HOH HOH . E 5 HOH A 52 552 31 HOH HOH . E 5 HOH A 53 553 77 HOH HOH . E 5 HOH A 54 554 79 HOH HOH . E 5 HOH A 55 555 52 HOH HOH . E 5 HOH A 56 556 71 HOH HOH . E 5 HOH A 57 557 22 HOH HOH . E 5 HOH A 58 558 54 HOH HOH . E 5 HOH A 59 559 11 HOH HOH . E 5 HOH A 60 560 73 HOH HOH . E 5 HOH A 61 561 29 HOH HOH . E 5 HOH A 62 562 34 HOH HOH . E 5 HOH A 63 563 17 HOH HOH . E 5 HOH A 64 564 74 HOH HOH . E 5 HOH A 65 565 27 HOH HOH . E 5 HOH A 66 566 18 HOH HOH . E 5 HOH A 67 567 30 HOH HOH . E 5 HOH A 68 568 57 HOH HOH . E 5 HOH A 69 569 47 HOH HOH . E 5 HOH A 70 570 49 HOH HOH . E 5 HOH A 71 571 9 HOH HOH . E 5 HOH A 72 572 13 HOH HOH . E 5 HOH A 73 573 87 HOH HOH . E 5 HOH A 74 574 44 HOH HOH . E 5 HOH A 75 575 23 HOH HOH . E 5 HOH A 76 576 58 HOH HOH . E 5 HOH A 77 577 4 HOH HOH . E 5 HOH A 78 578 39 HOH HOH . E 5 HOH A 79 579 51 HOH HOH . E 5 HOH A 80 580 63 HOH HOH . E 5 HOH A 81 581 84 HOH HOH . E 5 HOH A 82 582 90 HOH HOH . E 5 HOH A 83 583 35 HOH HOH . E 5 HOH A 84 584 64 HOH HOH . E 5 HOH A 85 585 68 HOH HOH . E 5 HOH A 86 586 36 HOH HOH . E 5 HOH A 87 587 43 HOH HOH . E 5 HOH A 88 588 40 HOH HOH . E 5 HOH A 89 589 66 HOH HOH . E 5 HOH A 90 590 46 HOH HOH . E 5 HOH A 91 591 99 HOH HOH . E 5 HOH A 92 592 25 HOH HOH . E 5 HOH A 93 593 20 HOH HOH . E 5 HOH A 94 594 93 HOH HOH . E 5 HOH A 95 595 65 HOH HOH . E 5 HOH A 96 596 96 HOH HOH . E 5 HOH A 97 597 92 HOH HOH . F 5 HOH B 1 301 97 HOH HOH . F 5 HOH B 2 302 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.945 _atom_site.Cartn_y -9.512 _atom_site.Cartn_z 76.417 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #