data_8Z7T # _model_server_result.job_id AHCN5ykUGZ5quyOi9BMOVQ _model_server_result.datetime_utc '2025-02-05 07:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z7t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8Z7T # _exptl.entry_id 8Z7T _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 169.178 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z7T _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z7T _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H11 N O3' _chem_comp.formula_weight 169.178 _chem_comp.id UEG _chem_comp.mon_nstd_flag . _chem_comp.name 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OP4 C5A UEG sing 356 n n C5A C5 UEG sing 357 n n C5 C6 UEG sing 358 n y C5 C4 UEG doub 359 n y C6 N1 UEG doub 360 n y N1 C2 UEG sing 361 n y C2 C3 UEG doub 362 n y C2 C2A UEG sing 363 n n C3 C4 UEG sing 364 n y C3 O3 UEG sing 365 n n C4 C4A UEG sing 366 n n C4A O4A UEG sing 367 n n C4A H4A UEG sing 368 n n C4A H4B UEG sing 369 n n OP4 HP4 UEG sing 370 n n C5A H5A UEG sing 371 n n C5A H5B UEG sing 372 n n C6 H6 UEG sing 373 n n C2A H2A UEG sing 374 n n C2A H2B UEG sing 375 n n C2A H2C UEG sing 376 n n O3 H3 UEG sing 377 n n O4A H5 UEG sing 378 n n # _atom_sites.entry_id 8Z7T _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id UEG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id UEG _pdbx_nonpoly_scheme.auth_mon_id VB6 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OP4 UEG . . . B 2 123.486 128.162 155.62 1 74.97 ? OP4 UEG 501 A 1 HETATM 2 C C5A UEG . . . B 2 123.005 128.636 154.391 1 71.94 ? C5A UEG 501 A 1 HETATM 3 C C5 UEG . . . B 2 122.588 130.098 154.537 1 72.78 ? C5 UEG 501 A 1 HETATM 4 C C6 UEG . . . B 2 121.309 130.415 154.964 1 71.55 ? C6 UEG 501 A 1 HETATM 5 N N1 UEG . . . B 2 120.941 131.71 155.093 1 73.84 ? N1 UEG 501 A 1 HETATM 6 C C2 UEG . . . B 2 121.819 132.696 154.804 1 74.66 ? C2 UEG 501 A 1 HETATM 7 C C3 UEG . . . B 2 123.098 132.382 154.376 1 71.19 ? C3 UEG 501 A 1 HETATM 8 C C4 UEG . . . B 2 123.469 131.086 154.247 1 73.03 ? C4 UEG 501 A 1 HETATM 9 C C4A UEG . . . B 2 124.879 130.737 153.775 1 73.96 ? C4A UEG 501 A 1 HETATM 10 O O4A UEG . . . B 2 125.797 131.032 154.792 1 78.22 ? O4A UEG 501 A 1 HETATM 11 O O3 UEG . . . B 2 124.009 133.404 154.077 1 66.5 ? O3 UEG 501 A 1 HETATM 12 C C2A UEG . . . B 2 121.4 134.158 154.95 1 75 ? C2A UEG 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #