data_8ZBO # _model_server_result.job_id G5elK8X12adHzE0keaB4sQ _model_server_result.datetime_utc '2024-10-10 04:26:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 8ZBO # _exptl.entry_id 8ZBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZBO _cell.length_a 53.652 _cell.length_b 81.254 _cell.length_c 98.813 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 66 C MET 65 1_555 A N1 5SQ 67 C 5SQ 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? covale ? covale2 A C3 5SQ 67 C 5SQ 67 1_555 A N ASN 68 C ASN 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale3 B C MET 66 A MET 65 1_555 B N1 5SQ 67 A 5SQ 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.385 ? covale ? covale4 B C3 5SQ 67 A 5SQ 67 1_555 B N ASN 68 A ASN 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.253 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 278 n n N O2 NO3 sing 279 n n N O3 NO3 sing 280 n n # _atom_sites.entry_id 8ZBO _atom_sites.fract_transf_matrix[1][1] 0.018639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012307 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 C 1 301 1 NO3 NO3 . D 2 NO3 C 1 302 4 NO3 NO3 . E 2 NO3 C 1 303 5 NO3 NO3 . F 2 NO3 C 1 304 302 NO3 NO3 . G 3 EDO C 1 305 2 EDO EDO . H 3 EDO C 1 306 5 EDO EDO . I 2 NO3 A 1 301 2 NO3 NO3 . J 2 NO3 A 1 302 301 NO3 NO3 . K 4 PGE A 1 303 302 PGE P4K . L 5 HOH C 1 401 202 HOH HOH . L 5 HOH C 2 402 157 HOH HOH . L 5 HOH C 3 403 130 HOH HOH . L 5 HOH C 4 404 116 HOH HOH . L 5 HOH C 5 405 214 HOH HOH . L 5 HOH C 6 406 217 HOH HOH . L 5 HOH C 7 407 69 HOH HOH . L 5 HOH C 8 408 208 HOH HOH . L 5 HOH C 9 409 249 HOH HOH . L 5 HOH C 10 410 118 HOH HOH . L 5 HOH C 11 411 30 HOH HOH . L 5 HOH C 12 412 173 HOH HOH . L 5 HOH C 13 413 117 HOH HOH . L 5 HOH C 14 414 24 HOH HOH . L 5 HOH C 15 415 21 HOH HOH . L 5 HOH C 16 416 155 HOH HOH . L 5 HOH C 17 417 209 HOH HOH . L 5 HOH C 18 418 141 HOH HOH . L 5 HOH C 19 419 164 HOH HOH . L 5 HOH C 20 420 16 HOH HOH . L 5 HOH C 21 421 18 HOH HOH . L 5 HOH C 22 422 148 HOH HOH . L 5 HOH C 23 423 119 HOH HOH . L 5 HOH C 24 424 178 HOH HOH . L 5 HOH C 25 425 12 HOH HOH . L 5 HOH C 26 426 82 HOH HOH . L 5 HOH C 27 427 61 HOH HOH . L 5 HOH C 28 428 104 HOH HOH . L 5 HOH C 29 429 2 HOH HOH . L 5 HOH C 30 430 79 HOH HOH . L 5 HOH C 31 431 55 HOH HOH . L 5 HOH C 32 432 211 HOH HOH . L 5 HOH C 33 433 65 HOH HOH . L 5 HOH C 34 434 17 HOH HOH . L 5 HOH C 35 435 7 HOH HOH . L 5 HOH C 36 436 15 HOH HOH . L 5 HOH C 37 437 25 HOH HOH . L 5 HOH C 38 438 115 HOH HOH . L 5 HOH C 39 439 59 HOH HOH . L 5 HOH C 40 440 5 HOH HOH . L 5 HOH C 41 441 96 HOH HOH . L 5 HOH C 42 442 94 HOH HOH . L 5 HOH C 43 443 31 HOH HOH . L 5 HOH C 44 444 218 HOH HOH . L 5 HOH C 45 445 87 HOH HOH . L 5 HOH C 46 446 44 HOH HOH . L 5 HOH C 47 447 98 HOH HOH . L 5 HOH C 48 448 237 HOH HOH . L 5 HOH C 49 449 108 HOH HOH . L 5 HOH C 50 450 166 HOH HOH . L 5 HOH C 51 451 13 HOH HOH . L 5 HOH C 52 452 6 HOH HOH . L 5 HOH C 53 453 241 HOH HOH . L 5 HOH C 54 454 32 HOH HOH . L 5 HOH C 55 455 200 HOH HOH . L 5 HOH C 56 456 125 HOH HOH . L 5 HOH C 57 457 236 HOH HOH . L 5 HOH C 58 458 100 HOH HOH . L 5 HOH C 59 459 10 HOH HOH . L 5 HOH C 60 460 107 HOH HOH . L 5 HOH C 61 461 20 HOH HOH . L 5 HOH C 62 462 194 HOH HOH . L 5 HOH C 63 463 168 HOH HOH . L 5 HOH C 64 464 80 HOH HOH . L 5 HOH C 65 465 136 HOH HOH . L 5 HOH C 66 466 124 HOH HOH . L 5 HOH C 67 467 162 HOH HOH . L 5 HOH C 68 468 102 HOH HOH . L 5 HOH C 69 469 90 HOH HOH . L 5 HOH C 70 470 9 HOH HOH . L 5 HOH C 71 471 92 HOH HOH . L 5 HOH C 72 472 26 HOH HOH . L 5 HOH C 73 473 1 HOH HOH . L 5 HOH C 74 474 123 HOH HOH . L 5 HOH C 75 475 54 HOH HOH . L 5 HOH C 76 476 42 HOH HOH . L 5 HOH C 77 477 203 HOH HOH . L 5 HOH C 78 478 40 HOH HOH . L 5 HOH C 79 479 110 HOH HOH . L 5 HOH C 80 480 66 HOH HOH . L 5 HOH C 81 481 219 HOH HOH . L 5 HOH C 82 482 159 HOH HOH . L 5 HOH C 83 483 41 HOH HOH . L 5 HOH C 84 484 23 HOH HOH . L 5 HOH C 85 485 204 HOH HOH . L 5 HOH C 86 486 35 HOH HOH . L 5 HOH C 87 487 175 HOH HOH . L 5 HOH C 88 488 114 HOH HOH . L 5 HOH C 89 489 88 HOH HOH . L 5 HOH C 90 490 64 HOH HOH . L 5 HOH C 91 491 183 HOH HOH . L 5 HOH C 92 492 39 HOH HOH . L 5 HOH C 93 493 152 HOH HOH . L 5 HOH C 94 494 75 HOH HOH . L 5 HOH C 95 495 230 HOH HOH . L 5 HOH C 96 496 63 HOH HOH . L 5 HOH C 97 497 192 HOH HOH . L 5 HOH C 98 498 57 HOH HOH . L 5 HOH C 99 499 85 HOH HOH . L 5 HOH C 100 500 34 HOH HOH . L 5 HOH C 101 501 68 HOH HOH . L 5 HOH C 102 502 135 HOH HOH . L 5 HOH C 103 503 244 HOH HOH . L 5 HOH C 104 504 224 HOH HOH . L 5 HOH C 105 505 140 HOH HOH . L 5 HOH C 106 506 138 HOH HOH . L 5 HOH C 107 507 207 HOH HOH . L 5 HOH C 108 508 234 HOH HOH . L 5 HOH C 109 509 163 HOH HOH . L 5 HOH C 110 510 28 HOH HOH . L 5 HOH C 111 511 227 HOH HOH . L 5 HOH C 112 512 127 HOH HOH . L 5 HOH C 113 513 38 HOH HOH . L 5 HOH C 114 514 106 HOH HOH . L 5 HOH C 115 515 221 HOH HOH . L 5 HOH C 116 516 144 HOH HOH . L 5 HOH C 117 517 205 HOH HOH . L 5 HOH C 118 518 215 HOH HOH . L 5 HOH C 119 519 190 HOH HOH . L 5 HOH C 120 520 191 HOH HOH . L 5 HOH C 121 521 78 HOH HOH . L 5 HOH C 122 522 146 HOH HOH . L 5 HOH C 123 523 198 HOH HOH . L 5 HOH C 124 524 147 HOH HOH . L 5 HOH C 125 525 180 HOH HOH . L 5 HOH C 126 526 231 HOH HOH . L 5 HOH C 127 527 91 HOH HOH . L 5 HOH C 128 528 181 HOH HOH . L 5 HOH C 129 529 188 HOH HOH . L 5 HOH C 130 530 167 HOH HOH . L 5 HOH C 131 531 176 HOH HOH . L 5 HOH C 132 532 216 HOH HOH . L 5 HOH C 133 533 142 HOH HOH . L 5 HOH C 134 534 222 HOH HOH . L 5 HOH C 135 535 161 HOH HOH . L 5 HOH C 136 536 239 HOH HOH . L 5 HOH C 137 537 47 HOH HOH . L 5 HOH C 138 538 154 HOH HOH . L 5 HOH C 139 539 223 HOH HOH . M 5 HOH A 1 401 170 HOH HOH . M 5 HOH A 2 402 27 HOH HOH . M 5 HOH A 3 403 97 HOH HOH . M 5 HOH A 4 404 150 HOH HOH . M 5 HOH A 5 405 76 HOH HOH . M 5 HOH A 6 406 220 HOH HOH . M 5 HOH A 7 407 195 HOH HOH . M 5 HOH A 8 408 53 HOH HOH . M 5 HOH A 9 409 45 HOH HOH . M 5 HOH A 10 410 129 HOH HOH . M 5 HOH A 11 411 99 HOH HOH . M 5 HOH A 12 412 105 HOH HOH . M 5 HOH A 13 413 225 HOH HOH . M 5 HOH A 14 414 93 HOH HOH . M 5 HOH A 15 415 197 HOH HOH . M 5 HOH A 16 416 89 HOH HOH . M 5 HOH A 17 417 51 HOH HOH . M 5 HOH A 18 418 132 HOH HOH . M 5 HOH A 19 419 247 HOH HOH . M 5 HOH A 20 420 242 HOH HOH . M 5 HOH A 21 421 60 HOH HOH . M 5 HOH A 22 422 3 HOH HOH . M 5 HOH A 23 423 131 HOH HOH . M 5 HOH A 24 424 71 HOH HOH . M 5 HOH A 25 425 11 HOH HOH . M 5 HOH A 26 426 112 HOH HOH . M 5 HOH A 27 427 74 HOH HOH . M 5 HOH A 28 428 72 HOH HOH . M 5 HOH A 29 429 187 HOH HOH . M 5 HOH A 30 430 229 HOH HOH . M 5 HOH A 31 431 145 HOH HOH . M 5 HOH A 32 432 171 HOH HOH . M 5 HOH A 33 433 139 HOH HOH . M 5 HOH A 34 434 14 HOH HOH . M 5 HOH A 35 435 156 HOH HOH . M 5 HOH A 36 436 165 HOH HOH . M 5 HOH A 37 437 33 HOH HOH . M 5 HOH A 38 438 37 HOH HOH . M 5 HOH A 39 439 36 HOH HOH . M 5 HOH A 40 440 196 HOH HOH . M 5 HOH A 41 441 134 HOH HOH . M 5 HOH A 42 442 58 HOH HOH . M 5 HOH A 43 443 133 HOH HOH . M 5 HOH A 44 444 246 HOH HOH . M 5 HOH A 45 445 120 HOH HOH . M 5 HOH A 46 446 189 HOH HOH . M 5 HOH A 47 447 70 HOH HOH . M 5 HOH A 48 448 213 HOH HOH . M 5 HOH A 49 449 81 HOH HOH . M 5 HOH A 50 450 160 HOH HOH . M 5 HOH A 51 451 19 HOH HOH . M 5 HOH A 52 452 113 HOH HOH . M 5 HOH A 53 453 86 HOH HOH . M 5 HOH A 54 454 128 HOH HOH . M 5 HOH A 55 455 56 HOH HOH . M 5 HOH A 56 456 151 HOH HOH . M 5 HOH A 57 457 29 HOH HOH . M 5 HOH A 58 458 62 HOH HOH . M 5 HOH A 59 459 172 HOH HOH . M 5 HOH A 60 460 109 HOH HOH . M 5 HOH A 61 461 193 HOH HOH . M 5 HOH A 62 462 83 HOH HOH . M 5 HOH A 63 463 199 HOH HOH . M 5 HOH A 64 464 103 HOH HOH . M 5 HOH A 65 465 4 HOH HOH . M 5 HOH A 66 466 22 HOH HOH . M 5 HOH A 67 467 122 HOH HOH . M 5 HOH A 68 468 49 HOH HOH . M 5 HOH A 69 469 153 HOH HOH . M 5 HOH A 70 470 8 HOH HOH . M 5 HOH A 71 471 77 HOH HOH . M 5 HOH A 72 472 101 HOH HOH . M 5 HOH A 73 473 46 HOH HOH . M 5 HOH A 74 474 177 HOH HOH . M 5 HOH A 75 475 67 HOH HOH . M 5 HOH A 76 476 50 HOH HOH . M 5 HOH A 77 477 48 HOH HOH . M 5 HOH A 78 478 73 HOH HOH . M 5 HOH A 79 479 52 HOH HOH . M 5 HOH A 80 480 43 HOH HOH . M 5 HOH A 81 481 158 HOH HOH . M 5 HOH A 82 482 210 HOH HOH . M 5 HOH A 83 483 212 HOH HOH . M 5 HOH A 84 484 228 HOH HOH . M 5 HOH A 85 485 126 HOH HOH . M 5 HOH A 86 486 185 HOH HOH . M 5 HOH A 87 487 121 HOH HOH . M 5 HOH A 88 488 226 HOH HOH . M 5 HOH A 89 489 149 HOH HOH . M 5 HOH A 90 490 206 HOH HOH . M 5 HOH A 91 491 84 HOH HOH . M 5 HOH A 92 492 179 HOH HOH . M 5 HOH A 93 493 143 HOH HOH . M 5 HOH A 94 494 184 HOH HOH . M 5 HOH A 95 495 201 HOH HOH . M 5 HOH A 96 496 186 HOH HOH . M 5 HOH A 97 497 111 HOH HOH . M 5 HOH A 98 498 137 HOH HOH . M 5 HOH A 99 499 232 HOH HOH . M 5 HOH A 100 500 245 HOH HOH . M 5 HOH A 101 501 248 HOH HOH . M 5 HOH A 102 502 182 HOH HOH . M 5 HOH A 103 503 169 HOH HOH . M 5 HOH A 104 504 233 HOH HOH . M 5 HOH A 105 505 243 HOH HOH . M 5 HOH A 106 506 235 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . F 2 -2.151 1.608 -1.077 1 26.56 ? N NO3 304 C 1 HETATM 2 O O1 NO3 . . . F 2 -3.117 1.296 -1.795 1 27.88 ? O1 NO3 304 C 1 HETATM 3 O O2 NO3 . . . F 2 -1.63 0.755 -0.337 1 26.43 ? O2 NO3 304 C 1 HETATM 4 O O3 NO3 . . . F 2 -1.846 2.781 -0.932 1 26.83 ? O3 NO3 304 C 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #