data_8ZE3 # _model_server_result.job_id J5F2lvtdLnGdEpJMLShTNg _model_server_result.datetime_utc '2024-10-31 09:25:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ze3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8ZE3 # _exptl.entry_id 8ZE3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-fructofuranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZE3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZE3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id FRU _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FRU sing 83 n n C1 O1 FRU sing 84 n n C1 H11 FRU sing 85 n n C1 H12 FRU sing 86 n n C2 C3 FRU sing 87 n n C2 O2 FRU sing 88 n n C2 O5 FRU sing 89 n n C3 C4 FRU sing 90 n n C3 O3 FRU sing 91 n n C3 H3 FRU sing 92 n n C4 C5 FRU sing 93 n n C4 O4 FRU sing 94 n n C4 H4 FRU sing 95 n n C5 C6 FRU sing 96 n n C5 O5 FRU sing 97 n n C5 H5 FRU sing 98 n n C6 O6 FRU sing 99 n n C6 H61 FRU sing 100 n n C6 H62 FRU sing 101 n n O1 HO1 FRU sing 102 n n O2 HO2 FRU sing 103 n n O3 HO3 FRU sing 104 n n O4 HO4 FRU sing 105 n n O6 HO6 FRU sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version FRU DFrufb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 FRU b-D-fructofuranose 'COMMON NAME' GMML 1 FRU b-D-Fruf 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 FRU Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8ZE3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FRU A 1 501 501 FRU UNL . F 2 FRU B 1 501 501 FRU UNL . G 2 FRU C 1 501 501 FRU UNL . H 2 FRU D 1 501 501 FRU UNL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FRU . . . E 2 92.047 123.361 85.955 1 0 ? C1 FRU 501 A 1 HETATM 2 C C2 FRU . . . E 2 91.561 124.222 87.052 1 0 ? C2 FRU 501 A 1 HETATM 3 C C3 FRU . . . E 2 92.141 123.761 88.313 1 0 ? C3 FRU 501 A 1 HETATM 4 C C4 FRU . . . E 2 91.347 124.477 89.304 1 0 ? C4 FRU 501 A 1 HETATM 5 C C5 FRU . . . E 2 90.012 124.652 88.69 1 0 ? C5 FRU 501 A 1 HETATM 6 C C6 FRU . . . E 2 89.661 126.086 88.614 1 0 ? C6 FRU 501 A 1 HETATM 7 O O1 FRU . . . E 2 92.924 124.124 85.187 1 0 ? O1 FRU 501 A 1 HETATM 8 O O2 FRU . . . E 2 91.906 125.547 86.79 1 0 ? O2 FRU 501 A 1 HETATM 9 O O3 FRU . . . E 2 93.515 124.122 88.385 1 0 ? O3 FRU 501 A 1 HETATM 10 O O4 FRU . . . E 2 91.213 123.708 90.496 1 0 ? O4 FRU 501 A 1 HETATM 11 O O5 FRU . . . E 2 90.119 124.145 87.317 1 0 ? O5 FRU 501 A 1 HETATM 12 O O6 FRU . . . E 2 88.819 126.288 87.522 1 0 ? O6 FRU 501 A 1 HETATM 13 H H11 FRU . . . E 2 92.568 122.501 86.36 1 0 ? H11 FRU 501 A 1 HETATM 14 H H12 FRU . . . E 2 91.208 123.037 85.349 1 0 ? H12 FRU 501 A 1 HETATM 15 H H3 FRU . . . E 2 92.01 122.694 88.427 1 0 ? H3 FRU 501 A 1 HETATM 16 H H4 FRU . . . E 2 91.797 125.436 89.526 1 0 ? H4 FRU 501 A 1 HETATM 17 H H5 FRU . . . E 2 89.265 124.108 89.25 1 0 ? H5 FRU 501 A 1 HETATM 18 H H61 FRU . . . E 2 89.156 126.382 89.528 1 0 ? H61 FRU 501 A 1 HETATM 19 H H62 FRU . . . E 2 90.553 126.689 88.487 1 0 ? H62 FRU 501 A 1 HETATM 20 H HO1 FRU . . . E 2 92.532 124.974 85.068 1 0 ? HO1 FRU 501 A 1 HETATM 21 H HO2 FRU . . . E 2 92.604 125.814 87.368 1 0 ? HO2 FRU 501 A 1 HETATM 22 H HO3 FRU . . . E 2 93.701 124.481 89.237 1 0 ? HO3 FRU 501 A 1 HETATM 23 H HO4 FRU . . . E 2 90.818 122.875 90.294 1 0 ? HO4 FRU 501 A 1 HETATM 24 H HO6 FRU . . . E 2 88.621 127.208 87.443 1 0 ? HO6 FRU 501 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #