data_8ZE9
#
_model_server_result.job_id            iI4daVESdU1ZJuT9zwKLLw 
_model_server_result.datetime_utc      '2025-01-04 07:35:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ze9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    8ZE9 
#
_exptl.entry_id    8ZE9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8ZE9 
_cell.length_a            107.499 
_cell.length_b            107.499 
_cell.length_c            44.919 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZE9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8ZE9 
_atom_sites.fract_transf_matrix[1][1]    0.009302 
_atom_sites.fract_transf_matrix[1][2]    0.005371 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010742 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022262 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TKU A 1 401 401 TKU DEH . 
C 3 TRS A 1 402 404 TRS TRS . 
D 4 GOL A 1 403 406 GOL GOL . 
E 4 GOL A 1 404 408 GOL GOL . 
F 4 GOL A 1 405 409 GOL GOL . 
G 4 GOL A 1 406 410 GOL GOL . 
H 5 HOH A 1 501 98 HOH HOH . 
H 5 HOH A 2 502 34 HOH HOH . 
H 5 HOH A 3 503 97 HOH HOH . 
H 5 HOH A 4 504 18 HOH HOH . 
H 5 HOH A 5 505 25 HOH HOH . 
H 5 HOH A 6 506 76 HOH HOH . 
H 5 HOH A 7 507 22 HOH HOH . 
H 5 HOH A 8 508 74 HOH HOH . 
H 5 HOH A 9 509 13 HOH HOH . 
H 5 HOH A 10 510 16 HOH HOH . 
H 5 HOH A 11 511 90 HOH HOH . 
H 5 HOH A 12 512 45 HOH HOH . 
H 5 HOH A 13 513 15 HOH HOH . 
H 5 HOH A 14 514 59 HOH HOH . 
H 5 HOH A 15 515 21 HOH HOH . 
H 5 HOH A 16 516 27 HOH HOH . 
H 5 HOH A 17 517 3 HOH HOH . 
H 5 HOH A 18 518 30 HOH HOH . 
H 5 HOH A 19 519 28 HOH HOH . 
H 5 HOH A 20 520 24 HOH HOH . 
H 5 HOH A 21 521 12 HOH HOH . 
H 5 HOH A 22 522 32 HOH HOH . 
H 5 HOH A 23 523 36 HOH HOH . 
H 5 HOH A 24 524 26 HOH HOH . 
H 5 HOH A 25 525 83 HOH HOH . 
H 5 HOH A 26 526 72 HOH HOH . 
H 5 HOH A 27 527 47 HOH HOH . 
H 5 HOH A 28 528 8 HOH HOH . 
H 5 HOH A 29 529 56 HOH HOH . 
H 5 HOH A 30 530 33 HOH HOH . 
H 5 HOH A 31 531 41 HOH HOH . 
H 5 HOH A 32 532 31 HOH HOH . 
H 5 HOH A 33 533 39 HOH HOH . 
H 5 HOH A 34 534 2 HOH HOH . 
H 5 HOH A 35 535 6 HOH HOH . 
H 5 HOH A 36 536 43 HOH HOH . 
H 5 HOH A 37 537 20 HOH HOH . 
H 5 HOH A 38 538 14 HOH HOH . 
H 5 HOH A 39 539 44 HOH HOH . 
H 5 HOH A 40 540 7 HOH HOH . 
H 5 HOH A 41 541 46 HOH HOH . 
H 5 HOH A 42 542 23 HOH HOH . 
H 5 HOH A 43 543 19 HOH HOH . 
H 5 HOH A 44 544 9 HOH HOH . 
H 5 HOH A 45 545 35 HOH HOH . 
H 5 HOH A 46 546 48 HOH HOH . 
H 5 HOH A 47 547 10 HOH HOH . 
H 5 HOH A 48 548 40 HOH HOH . 
H 5 HOH A 49 549 49 HOH HOH . 
H 5 HOH A 50 550 61 HOH HOH . 
H 5 HOH A 51 551 71 HOH HOH . 
H 5 HOH A 52 552 4 HOH HOH . 
H 5 HOH A 53 553 29 HOH HOH . 
H 5 HOH A 54 554 38 HOH HOH . 
H 5 HOH A 55 555 66 HOH HOH . 
H 5 HOH A 56 556 92 HOH HOH . 
H 5 HOH A 57 557 51 HOH HOH . 
H 5 HOH A 58 558 81 HOH HOH . 
H 5 HOH A 59 559 95 HOH HOH . 
H 5 HOH A 60 560 89 HOH HOH . 
H 5 HOH A 61 561 53 HOH HOH . 
H 5 HOH A 62 562 50 HOH HOH . 
H 5 HOH A 63 563 99 HOH HOH . 
H 5 HOH A 64 564 78 HOH HOH . 
H 5 HOH A 65 565 42 HOH HOH . 
H 5 HOH A 66 566 65 HOH HOH . 
H 5 HOH A 67 567 75 HOH HOH . 
H 5 HOH A 68 568 68 HOH HOH . 
H 5 HOH A 69 569 88 HOH HOH . 
H 5 HOH A 70 570 62 HOH HOH . 
H 5 HOH A 71 571 54 HOH HOH . 
H 5 HOH A 72 572 64 HOH HOH . 
H 5 HOH A 73 573 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -36.761 -33.954 -15.456 1 53.09 0 C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . E 4 -37.797 -33.05 -15.068 1 48.04 0 O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . E 4 -36.272 -33.689 -16.867 1 53.53 0 C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . E 4 -35.995 -32.298 -17.044 1 52.74 0 O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . E 4 -35.083 -34.537 -17.287 1 55.2 0 C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . E 4 -33.83 -33.911 -17.002 1 45.5 0 O3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           510 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#