data_8ZFN # _model_server_result.job_id flzL58zZ6FXmQyfjyDAtHQ _model_server_result.datetime_utc '2024-11-14 04:25:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8ZFN # _exptl.entry_id 8ZFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.675 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-phenylbenzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.38 _cell.angle_gamma 90 _cell.entry_id 8ZFN _cell.length_a 92.186 _cell.length_b 61.991 _cell.length_c 118.841 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.093 30.9955 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 83 A CYS 285 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? covale ? covale2 B SG CYS 83 B CYS 285 1_555 E C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? # _chem_comp.formula 'C13 H9 Cl N2 O3' _chem_comp.formula_weight 276.675 _chem_comp.id GW9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-phenylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C9 GW9 sing 129 n n C9 C10 GW9 doub 130 n y C9 C8 GW9 sing 131 n y C10 C11 GW9 sing 132 n y C10 H10 GW9 sing 133 n n C11 C12 GW9 doub 134 n y C11 H11 GW9 sing 135 n n C12 N2 GW9 sing 136 n n C12 C13 GW9 sing 137 n y N2 O3 GW9 sing 138 n n N2 O2 GW9 doub 139 n n C13 C8 GW9 doub 140 n y C13 H13 GW9 sing 141 n n C8 C1 GW9 sing 142 n n C1 O1 GW9 doub 143 n n C1 N1 GW9 sing 144 n n N1 C2 GW9 sing 145 n n N1 HN1 GW9 sing 146 n n C2 C7 GW9 doub 147 n y C2 C3 GW9 sing 148 n y C7 C6 GW9 sing 149 n y C7 H7 GW9 sing 150 n n C6 C5 GW9 doub 151 n y C6 H6 GW9 sing 152 n n C5 C4 GW9 sing 153 n y C5 H5 GW9 sing 154 n n C4 C3 GW9 doub 155 n y C4 H4 GW9 sing 156 n n C3 H3 GW9 sing 157 n n # _atom_sites.entry_id 8ZFN _atom_sites.fract_transf_matrix[1][1] 0.010848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002381 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008615 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 501 GW9 GW9 . D 3 PLB A 1 502 502 PLB PLB . E 2 GW9 B 1 501 501 GW9 GW9 . F 3 PLB B 1 502 502 PLB PLB . G 4 HOH A 1 601 18 HOH HOH . G 4 HOH A 2 602 3 HOH HOH . G 4 HOH A 3 603 21 HOH HOH . G 4 HOH A 4 604 28 HOH HOH . G 4 HOH A 5 605 16 HOH HOH . G 4 HOH A 6 606 4 HOH HOH . G 4 HOH A 7 607 2 HOH HOH . G 4 HOH A 8 608 19 HOH HOH . G 4 HOH A 9 609 26 HOH HOH . G 4 HOH A 10 610 29 HOH HOH . G 4 HOH A 11 611 6 HOH HOH . G 4 HOH A 12 612 11 HOH HOH . G 4 HOH A 13 613 33 HOH HOH . G 4 HOH A 14 614 12 HOH HOH . G 4 HOH A 15 615 25 HOH HOH . G 4 HOH A 16 616 35 HOH HOH . G 4 HOH A 17 617 24 HOH HOH . G 4 HOH A 18 618 32 HOH HOH . G 4 HOH A 19 619 23 HOH HOH . H 4 HOH B 1 601 13 HOH HOH . H 4 HOH B 2 602 17 HOH HOH . H 4 HOH B 3 603 15 HOH HOH . H 4 HOH B 4 604 22 HOH HOH . H 4 HOH B 5 605 5 HOH HOH . H 4 HOH B 6 606 34 HOH HOH . H 4 HOH B 7 607 8 HOH HOH . H 4 HOH B 8 608 37 HOH HOH . H 4 HOH B 9 609 10 HOH HOH . H 4 HOH B 10 610 1 HOH HOH . H 4 HOH B 11 611 9 HOH HOH . H 4 HOH B 12 612 27 HOH HOH . H 4 HOH B 13 613 14 HOH HOH . H 4 HOH B 14 614 7 HOH HOH . H 4 HOH B 15 615 30 HOH HOH . H 4 HOH B 16 616 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GW9 . . . C 2 19.958 64.173 15.149 1 86.88 ? C9 GW9 501 A 1 HETATM 2 C C10 GW9 . . . C 2 20.817 65.159 15.624 1 84.27 ? C10 GW9 501 A 1 HETATM 3 C C11 GW9 . . . C 2 20.878 65.435 16.982 1 82.37 ? C11 GW9 501 A 1 HETATM 4 C C12 GW9 . . . C 2 20.084 64.715 17.869 1 86.92 ? C12 GW9 501 A 1 HETATM 5 N N2 GW9 . . . C 2 20.137 64.997 19.303 1 87.42 ? N2 GW9 501 A 1 HETATM 6 O O3 GW9 . . . C 2 21.072 65.936 19.778 1 85.31 ? O3 GW9 501 A 1 HETATM 7 O O2 GW9 . . . C 2 19.395 64.455 20.049 1 80.28 ? O2 GW9 501 A 1 HETATM 8 C C13 GW9 . . . C 2 19.235 63.722 17.402 1 83.31 ? C13 GW9 501 A 1 HETATM 9 C C8 GW9 . . . C 2 19.178 63.44 16.042 1 85.85 ? C8 GW9 501 A 1 HETATM 10 C C1 GW9 . . . C 2 18.217 62.373 15.506 1 81.31 ? C1 GW9 501 A 1 HETATM 11 O O1 GW9 . . . C 2 18.478 61.212 15.507 1 78.19 ? O1 GW9 501 A 1 HETATM 12 N N1 GW9 . . . C 2 16.962 62.898 14.989 1 81.94 ? N1 GW9 501 A 1 HETATM 13 C C2 GW9 . . . C 2 15.895 62.123 14.4 1 79.98 ? C2 GW9 501 A 1 HETATM 14 C C7 GW9 . . . C 2 15.139 61.241 15.156 1 73.56 ? C7 GW9 501 A 1 HETATM 15 C C6 GW9 . . . C 2 14.123 60.515 14.553 1 73.48 ? C6 GW9 501 A 1 HETATM 16 C C5 GW9 . . . C 2 13.863 60.669 13.198 1 74.45 ? C5 GW9 501 A 1 HETATM 17 C C4 GW9 . . . C 2 14.626 61.545 12.437 1 74.5 ? C4 GW9 501 A 1 HETATM 18 C C3 GW9 . . . C 2 15.635 62.281 13.04 1 74.99 ? C3 GW9 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #