data_8ZFO # _model_server_result.job_id L4-e6x2Y7DOsXLRc6TfuHw _model_server_result.datetime_utc '2024-11-16 09:56:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8ZFO # _exptl.entry_id 8ZFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 428.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-CHLORO-1-(4-CHLOROBENZYL)-3-(PHENYLTHIO)-1H-INDOLE-2-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.19 _cell.angle_gamma 90 _cell.entry_id 8ZFO _cell.length_a 92.75 _cell.length_b 62.216 _cell.length_c 119.077 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.375 31.108 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C22 H15 Cl2 N O2 S' _chem_comp.formula_weight 428.331 _chem_comp.id NZA _chem_comp.mon_nstd_flag . _chem_comp.name '5-CHLORO-1-(4-CHLOROBENZYL)-3-(PHENYLTHIO)-1H-INDOLE-2-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NTZDPA # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAM CAJ NZA sing 266 n y CAM CAV NZA doub 267 n y CAM HAM NZA sing 268 n n CAJ CAT NZA doub 269 n y CAJ HAJ NZA sing 270 n n CAT CLAC NZA sing 271 n n CAT CAK NZA sing 272 n y CAK CAN NZA doub 273 n y CAK HAK NZA sing 274 n n CAN CAV NZA sing 275 n y CAN HAN NZA sing 276 n n CAV CAQ NZA sing 277 n n CAQ NBB NZA sing 278 n n CAQ HAQ1 NZA sing 279 n n CAQ HAQ2 NZA sing 280 n n NBB CBA NZA sing 281 n y NBB CAY NZA sing 282 n y CAY CAS NZA sing 283 n n CAY CAX NZA doub 284 n y CAS OAA NZA doub 285 n n CAS OAB NZA sing 286 n n OAB HOAB NZA sing 287 n n CBA CAO NZA sing 288 n y CBA CAZ NZA doub 289 n y CAO CAL NZA doub 290 n y CAO HAO NZA sing 291 n n CAL CAU NZA sing 292 n y CAL HAL NZA sing 293 n n CAU CLAD NZA sing 294 n n CAU CAP NZA doub 295 n y CAP CAZ NZA sing 296 n y CAP HAP NZA sing 297 n n CAZ CAX NZA sing 298 n y CAX SAR NZA sing 299 n n SAR CAW NZA sing 300 n n CAW CAI NZA doub 301 n y CAW CAH NZA sing 302 n y CAH CAF NZA doub 303 n y CAH HAH NZA sing 304 n n CAF CAE NZA sing 305 n y CAF HAF NZA sing 306 n n CAE CAG NZA doub 307 n y CAE HAE NZA sing 308 n n CAG CAI NZA sing 309 n y CAG HAG NZA sing 310 n n CAI HAI NZA sing 311 n n # _atom_sites.entry_id 8ZFO _atom_sites.fract_transf_matrix[1][1] 0.010782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002329 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008592 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NZA A 1 501 503 NZA NZA . D 3 GW9 B 1 501 501 GW9 GW9 . E 2 NZA B 1 502 503 NZA NZA . F 4 HOH B 1 601 1 HOH HOH . F 4 HOH B 2 602 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAM NZA . . . C 2 13.444 61.876 10.72 1 74.07 ? CAM NZA 501 A 1 HETATM 2 C CAJ NZA . . . C 2 13.346 61.286 11.973 1 81 ? CAJ NZA 501 A 1 HETATM 3 C CAT NZA . . . C 2 14.082 61.796 13.053 1 91.03 ? CAT NZA 501 A 1 HETATM 4 CL CLAC NZA . . . C 2 13.941 61.055 14.669 1 93.15 ? CLAC NZA 501 A 1 HETATM 5 C CAK NZA . . . C 2 14.923 62.897 12.91 1 81.68 ? CAK NZA 501 A 1 HETATM 6 C CAN NZA . . . C 2 15.013 63.478 11.66 1 82.13 ? CAN NZA 501 A 1 HETATM 7 C CAV NZA . . . C 2 14.288 62.972 10.578 1 76.33 ? CAV NZA 501 A 1 HETATM 8 C CAQ NZA . . . C 2 14.4 63.645 9.224 1 66.76 ? CAQ NZA 501 A 1 HETATM 9 N NBB NZA . . . C 2 15.422 64.675 9.242 1 75.39 ? NBB NZA 501 A 1 HETATM 10 C CAY NZA . . . C 2 15.23 65.982 9.104 1 73.74 ? CAY NZA 501 A 1 HETATM 11 C CAS NZA . . . C 2 13.856 66.667 8.947 1 74.7 ? CAS NZA 501 A 1 HETATM 12 O OAB NZA . . . C 2 13.753 67.911 8.76 1 76.02 ? OAB NZA 501 A 1 HETATM 13 O OAA NZA . . . C 2 12.799 65.997 9.085 1 73.73 ? OAA NZA 501 A 1 HETATM 14 C CBA NZA . . . C 2 16.737 64.422 9.384 1 76.87 ? CBA NZA 501 A 1 HETATM 15 C CAO NZA . . . C 2 17.406 63.193 9.567 1 75.52 ? CAO NZA 501 A 1 HETATM 16 C CAL NZA . . . C 2 18.78 63.187 9.681 1 78.64 ? CAL NZA 501 A 1 HETATM 17 C CAU NZA . . . C 2 19.474 64.395 9.63 1 82.79 ? CAU NZA 501 A 1 HETATM 18 CL CLAD NZA . . . C 2 21.252 64.413 9.787 1 104.56 ? CLAD NZA 501 A 1 HETATM 19 C CAP NZA . . . C 2 18.816 65.604 9.462 1 73.02 ? CAP NZA 501 A 1 HETATM 20 C CAZ NZA . . . C 2 17.437 65.602 9.339 1 68.39 ? CAZ NZA 501 A 1 HETATM 21 C CAX NZA . . . C 2 16.488 66.596 9.144 1 67.57 ? CAX NZA 501 A 1 HETATM 22 S SAR NZA . . . C 2 16.933 68.339 9.024 1 78.78 ? SAR NZA 501 A 1 HETATM 23 C CAW NZA . . . C 2 16.831 69.174 7.391 1 89.47 ? CAW NZA 501 A 1 HETATM 24 C CAH NZA . . . C 2 17.803 70.114 7.041 1 96 ? CAH NZA 501 A 1 HETATM 25 C CAF NZA . . . C 2 17.753 70.779 5.815 1 99.18 ? CAF NZA 501 A 1 HETATM 26 C CAE NZA . . . C 2 16.719 70.524 4.917 1 96.14 ? CAE NZA 501 A 1 HETATM 27 C CAG NZA . . . C 2 15.738 69.597 5.249 1 90.91 ? CAG NZA 501 A 1 HETATM 28 C CAI NZA . . . C 2 15.795 68.939 6.483 1 89.2 ? CAI NZA 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #