data_8ZFO # _model_server_result.job_id baKCWTsYQzZNK0GIyZBYvA _model_server_result.datetime_utc '2024-11-16 09:52:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 8ZFO # _exptl.entry_id 8ZFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.675 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-phenylbenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.19 _cell.angle_gamma 90 _cell.entry_id 8ZFO _cell.length_a 92.75 _cell.length_b 62.216 _cell.length_c 119.077 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.375 31.108 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H9 Cl N2 O3' _chem_comp.formula_weight 276.675 _chem_comp.id GW9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-phenylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C9 GW9 sing 129 n n C9 C10 GW9 doub 130 n y C9 C8 GW9 sing 131 n y C10 C11 GW9 sing 132 n y C10 H10 GW9 sing 133 n n C11 C12 GW9 doub 134 n y C11 H11 GW9 sing 135 n n C12 N2 GW9 sing 136 n n C12 C13 GW9 sing 137 n y N2 O3 GW9 sing 138 n n N2 O2 GW9 doub 139 n n C13 C8 GW9 doub 140 n y C13 H13 GW9 sing 141 n n C8 C1 GW9 sing 142 n n C1 O1 GW9 doub 143 n n C1 N1 GW9 sing 144 n n N1 C2 GW9 sing 145 n n N1 HN1 GW9 sing 146 n n C2 C7 GW9 doub 147 n y C2 C3 GW9 sing 148 n y C7 C6 GW9 sing 149 n y C7 H7 GW9 sing 150 n n C6 C5 GW9 doub 151 n y C6 H6 GW9 sing 152 n n C5 C4 GW9 sing 153 n y C5 H5 GW9 sing 154 n n C4 C3 GW9 doub 155 n y C4 H4 GW9 sing 156 n n C3 H3 GW9 sing 157 n n # _atom_sites.entry_id 8ZFO _atom_sites.fract_transf_matrix[1][1] 0.010782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002329 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008592 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NZA A 1 501 503 NZA NZA . D 3 GW9 B 1 501 501 GW9 GW9 . E 2 NZA B 1 502 503 NZA NZA . F 4 HOH B 1 601 1 HOH HOH . F 4 HOH B 2 602 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GW9 . . . D 3 36.849 38.057 37.749 1 74.03 ? C9 GW9 501 B 1 HETATM 2 C C10 GW9 . . . D 3 35.705 37.308 37.5 1 69.32 ? C10 GW9 501 B 1 HETATM 3 C C11 GW9 . . . D 3 35.082 37.373 36.255 1 71.64 ? C11 GW9 501 B 1 HETATM 4 C C12 GW9 . . . D 3 35.615 38.19 35.257 1 79.91 ? C12 GW9 501 B 1 HETATM 5 N N2 GW9 . . . D 3 35.167 38.408 33.874 1 84.61 ? N2 GW9 501 B 1 HETATM 6 O O3 GW9 . . . D 3 34.271 37.574 33.183 1 71.52 ? O3 GW9 501 B 1 HETATM 7 O O2 GW9 . . . D 3 35.639 39.323 33.285 1 90.55 ? O2 GW9 501 B 1 HETATM 8 C C13 GW9 . . . D 3 36.738 38.901 35.528 1 81.85 ? C13 GW9 501 B 1 HETATM 9 C C8 GW9 . . . D 3 37.335 38.876 36.745 1 78.99 ? C8 GW9 501 B 1 HETATM 10 C C1 GW9 . . . D 3 38.569 39.745 36.666 1 83.13 ? C1 GW9 501 B 1 HETATM 11 O O1 GW9 . . . D 3 38.917 40.553 37.451 1 82.88 ? O1 GW9 501 B 1 HETATM 12 N N1 GW9 . . . D 3 39.198 39.396 35.408 1 83.87 ? N1 GW9 501 B 1 HETATM 13 C C2 GW9 . . . D 3 40.38 39.798 34.716 1 83.94 ? C2 GW9 501 B 1 HETATM 14 C C7 GW9 . . . D 3 40.261 40.065 33.351 1 91.02 ? C7 GW9 501 B 1 HETATM 15 C C6 GW9 . . . D 3 41.391 40.427 32.624 1 92.06 ? C6 GW9 501 B 1 HETATM 16 C C5 GW9 . . . D 3 42.627 40.488 33.262 1 86.29 ? C5 GW9 501 B 1 HETATM 17 C C4 GW9 . . . D 3 42.723 40.196 34.616 1 80.75 ? C4 GW9 501 B 1 HETATM 18 C C3 GW9 . . . D 3 41.606 39.829 35.354 1 77.66 ? C3 GW9 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 18 #