data_8ZFP # _model_server_result.job_id pznaVn9Sut0HXgqBj5P2LA _model_server_result.datetime_utc '2024-11-24 00:52:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8ZFP # _exptl.entry_id 8ZFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.675 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-phenylbenzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.28 _cell.angle_gamma 90 _cell.entry_id 8ZFP _cell.length_a 91.844 _cell.length_b 62.221 _cell.length_c 119.237 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -45.922 31.1105 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 83 A CYS 285 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? covale ? covale2 B SG CYS 83 B CYS 285 1_555 E C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? # _chem_comp.formula 'C13 H9 Cl N2 O3' _chem_comp.formula_weight 276.675 _chem_comp.id GW9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-phenylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C9 GW9 sing 194 n n C9 C10 GW9 doub 195 n y C9 C8 GW9 sing 196 n y C10 C11 GW9 sing 197 n y C10 H10 GW9 sing 198 n n C11 C12 GW9 doub 199 n y C11 H11 GW9 sing 200 n n C12 N2 GW9 sing 201 n n C12 C13 GW9 sing 202 n y N2 O3 GW9 sing 203 n n N2 O2 GW9 doub 204 n n C13 C8 GW9 doub 205 n y C13 H13 GW9 sing 206 n n C8 C1 GW9 sing 207 n n C1 O1 GW9 doub 208 n n C1 N1 GW9 sing 209 n n N1 C2 GW9 sing 210 n n N1 HN1 GW9 sing 211 n n C2 C7 GW9 doub 212 n y C2 C3 GW9 sing 213 n y C7 C6 GW9 sing 214 n y C7 H7 GW9 sing 215 n n C6 C5 GW9 doub 216 n y C6 H6 GW9 sing 217 n n C5 C4 GW9 sing 218 n y C5 H5 GW9 sing 219 n n C4 C3 GW9 doub 220 n y C4 H4 GW9 sing 221 n n C3 H3 GW9 sing 222 n n # _atom_sites.entry_id 8ZFP _atom_sites.fract_transf_matrix[1][1] 0.010888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002369 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 501 GW9 GW9 . D 3 241 A 1 502 502 241 241 . E 2 GW9 B 1 501 501 GW9 GW9 . F 3 241 B 1 502 502 241 241 . G 4 HOH A 1 601 601 HOH HOH . G 4 HOH A 2 602 602 HOH HOH . G 4 HOH A 3 603 603 HOH HOH . G 4 HOH A 4 604 604 HOH HOH . G 4 HOH A 5 605 605 HOH HOH . G 4 HOH A 6 606 606 HOH HOH . G 4 HOH A 7 607 607 HOH HOH . G 4 HOH A 8 608 608 HOH HOH . G 4 HOH A 9 609 609 HOH HOH . G 4 HOH A 10 610 610 HOH HOH . G 4 HOH A 11 611 611 HOH HOH . G 4 HOH A 12 612 612 HOH HOH . G 4 HOH A 13 613 613 HOH HOH . G 4 HOH A 14 614 614 HOH HOH . G 4 HOH A 15 615 615 HOH HOH . G 4 HOH A 16 616 616 HOH HOH . G 4 HOH A 17 617 617 HOH HOH . G 4 HOH A 18 618 618 HOH HOH . G 4 HOH A 19 619 619 HOH HOH . G 4 HOH A 20 620 620 HOH HOH . G 4 HOH A 21 621 621 HOH HOH . G 4 HOH A 22 622 622 HOH HOH . G 4 HOH A 23 623 623 HOH HOH . G 4 HOH A 24 624 624 HOH HOH . G 4 HOH A 25 625 625 HOH HOH . G 4 HOH A 26 626 626 HOH HOH . G 4 HOH A 27 627 627 HOH HOH . G 4 HOH A 28 628 628 HOH HOH . G 4 HOH A 29 629 629 HOH HOH . G 4 HOH A 30 630 630 HOH HOH . G 4 HOH A 31 631 631 HOH HOH . G 4 HOH A 32 632 632 HOH HOH . G 4 HOH A 33 633 633 HOH HOH . G 4 HOH A 34 634 634 HOH HOH . G 4 HOH A 35 635 635 HOH HOH . G 4 HOH A 36 636 636 HOH HOH . G 4 HOH A 37 637 637 HOH HOH . G 4 HOH A 38 638 638 HOH HOH . G 4 HOH A 39 639 639 HOH HOH . G 4 HOH A 40 640 640 HOH HOH . G 4 HOH A 41 641 641 HOH HOH . G 4 HOH A 42 642 642 HOH HOH . G 4 HOH A 43 643 643 HOH HOH . G 4 HOH A 44 644 644 HOH HOH . H 4 HOH B 1 601 601 HOH HOH . H 4 HOH B 2 602 602 HOH HOH . H 4 HOH B 3 603 603 HOH HOH . H 4 HOH B 4 604 604 HOH HOH . H 4 HOH B 5 605 605 HOH HOH . H 4 HOH B 6 606 606 HOH HOH . H 4 HOH B 7 607 607 HOH HOH . H 4 HOH B 8 608 608 HOH HOH . H 4 HOH B 9 609 609 HOH HOH . H 4 HOH B 10 610 610 HOH HOH . H 4 HOH B 11 611 611 HOH HOH . H 4 HOH B 12 612 612 HOH HOH . H 4 HOH B 13 613 613 HOH HOH . H 4 HOH B 14 614 614 HOH HOH . H 4 HOH B 15 615 615 HOH HOH . H 4 HOH B 16 616 616 HOH HOH . H 4 HOH B 17 617 617 HOH HOH . H 4 HOH B 18 618 618 HOH HOH . H 4 HOH B 19 619 619 HOH HOH . H 4 HOH B 20 620 620 HOH HOH . H 4 HOH B 21 621 621 HOH HOH . H 4 HOH B 22 622 622 HOH HOH . H 4 HOH B 23 623 623 HOH HOH . H 4 HOH B 24 624 624 HOH HOH . H 4 HOH B 25 625 625 HOH HOH . H 4 HOH B 26 626 626 HOH HOH . H 4 HOH B 27 627 627 HOH HOH . H 4 HOH B 28 628 628 HOH HOH . H 4 HOH B 29 629 629 HOH HOH . H 4 HOH B 30 630 630 HOH HOH . H 4 HOH B 31 631 631 HOH HOH . H 4 HOH B 32 632 632 HOH HOH . H 4 HOH B 33 633 633 HOH HOH . H 4 HOH B 34 634 634 HOH HOH . H 4 HOH B 35 635 635 HOH HOH . H 4 HOH B 36 636 636 HOH HOH . H 4 HOH B 37 637 637 HOH HOH . H 4 HOH B 38 638 638 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GW9 . . . C 2 21.244 64.652 12.675 1 62.45 ? C9 GW9 501 A 1 HETATM 2 C C10 GW9 . . . C 2 21.649 64.855 11.352 1 64.22 ? C10 GW9 501 A 1 HETATM 3 C C11 GW9 . . . C 2 22.961 65.193 11.051 1 58.23 ? C11 GW9 501 A 1 HETATM 4 C C12 GW9 . . . C 2 23.862 65.327 12.092 1 65.53 ? C12 GW9 501 A 1 HETATM 5 N N2 GW9 . . . C 2 25.242 65.67 11.816 1 69.19 ? N2 GW9 501 A 1 HETATM 6 O O3 GW9 . . . C 2 25.674 65.809 10.489 1 68.69 ? O3 GW9 501 A 1 HETATM 7 O O2 GW9 . . . C 2 25.989 65.811 12.713 1 71.35 ? O2 GW9 501 A 1 HETATM 8 C C13 GW9 . . . C 2 23.476 65.13 13.411 1 65.29 ? C13 GW9 501 A 1 HETATM 9 C C8 GW9 . . . C 2 22.168 64.783 13.708 1 62.19 ? C8 GW9 501 A 1 HETATM 10 C C1 GW9 . . . C 2 21.728 64.577 15.161 1 66.44 ? C1 GW9 501 A 1 HETATM 11 O O1 GW9 . . . C 2 21.61 63.476 15.604 1 66.38 ? O1 GW9 501 A 1 HETATM 12 N N1 GW9 . . . C 2 21.437 65.778 15.934 1 66.97 ? N1 GW9 501 A 1 HETATM 13 C C2 GW9 . . . C 2 20.962 65.827 17.305 1 67.27 ? C2 GW9 501 A 1 HETATM 14 C C7 GW9 . . . C 2 21.529 66.702 18.225 1 66.21 ? C7 GW9 501 A 1 HETATM 15 C C6 GW9 . . . C 2 21.049 66.745 19.521 1 68.59 ? C6 GW9 501 A 1 HETATM 16 C C5 GW9 . . . C 2 19.984 65.936 19.912 1 69.73 ? C5 GW9 501 A 1 HETATM 17 C C4 GW9 . . . C 2 19.402 65.077 18.996 1 65.82 ? C4 GW9 501 A 1 HETATM 18 C C3 GW9 . . . C 2 19.889 65.034 17.695 1 66.75 ? C3 GW9 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 18 #