data_8ZFQ # _model_server_result.job_id EZHDITLZdINy6QhorkW8Xw _model_server_result.datetime_utc '2024-11-14 04:32:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8ZFQ # _exptl.entry_id 8ZFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 277.663 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-(pyridin-4-yl)benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.38 _cell.angle_gamma 90 _cell.entry_id 8ZFQ _cell.length_a 92.637 _cell.length_b 61.775 _cell.length_c 119.133 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.3185 30.8875 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 83 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 285 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id C03 _struct_conn.ptnr2_label_comp_id EEY _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id EEY _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.904 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H8 Cl N3 O3' _chem_comp.formula_weight 277.663 _chem_comp.id EEY _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-(pyridin-4-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C18 EEY doub 83 n y C17 N16 EEY sing 84 n y C18 C13 EEY sing 85 n y N16 C15 EEY doub 86 n y C13 C14 EEY doub 87 n y C13 N12 EEY sing 88 n n C15 C14 EEY sing 89 n y O11 C10 EEY doub 90 n n C10 N12 EEY sing 91 n n C10 C04 EEY sing 92 n n C03 C04 EEY doub 93 n y C03 C02 EEY sing 94 n y C04 C05 EEY sing 95 n y C02 C01 EEY doub 96 n y C05 C06 EEY doub 97 n y C01 C06 EEY sing 98 n y C06 N07 EEY sing 99 n n N07 O09 EEY doub 100 n n N07 O08 EEY sing 101 n n C03 CL1 EEY sing 102 n n N12 H1 EEY sing 103 n n C15 H2 EEY sing 104 n n C17 H3 EEY sing 105 n n C01 H4 EEY sing 106 n n C02 H5 EEY sing 107 n n C05 H6 EEY sing 108 n n C14 H7 EEY sing 109 n n C18 H8 EEY sing 110 n n # _atom_sites.entry_id 8ZFQ _atom_sites.fract_transf_matrix[1][1] 0.010795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00237 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EEY A 1 501 501 EEY LIG . D 3 PLB A 1 502 502 PLB PLB . E 2 EEY B 1 501 501 EEY LIG . F 3 PLB B 1 502 502 PLB PLB . G 4 HOH A 1 601 32 HOH HOH . G 4 HOH A 2 602 35 HOH HOH . G 4 HOH A 3 603 2 HOH HOH . G 4 HOH A 4 604 31 HOH HOH . G 4 HOH A 5 605 7 HOH HOH . G 4 HOH A 6 606 12 HOH HOH . G 4 HOH A 7 607 34 HOH HOH . G 4 HOH A 8 608 15 HOH HOH . G 4 HOH A 9 609 39 HOH HOH . G 4 HOH A 10 610 5 HOH HOH . G 4 HOH A 11 611 6 HOH HOH . G 4 HOH A 12 612 13 HOH HOH . G 4 HOH A 13 613 8 HOH HOH . G 4 HOH A 14 614 23 HOH HOH . G 4 HOH A 15 615 20 HOH HOH . G 4 HOH A 16 616 18 HOH HOH . G 4 HOH A 17 617 26 HOH HOH . G 4 HOH A 18 618 30 HOH HOH . G 4 HOH A 19 619 29 HOH HOH . G 4 HOH A 20 620 36 HOH HOH . H 4 HOH B 1 601 9 HOH HOH . H 4 HOH B 2 602 41 HOH HOH . H 4 HOH B 3 603 21 HOH HOH . H 4 HOH B 4 604 40 HOH HOH . H 4 HOH B 5 605 25 HOH HOH . H 4 HOH B 6 606 33 HOH HOH . H 4 HOH B 7 607 16 HOH HOH . H 4 HOH B 8 608 1 HOH HOH . H 4 HOH B 9 609 27 HOH HOH . H 4 HOH B 10 610 28 HOH HOH . H 4 HOH B 11 611 19 HOH HOH . H 4 HOH B 12 612 14 HOH HOH . H 4 HOH B 13 613 3 HOH HOH . H 4 HOH B 14 614 24 HOH HOH . H 4 HOH B 15 615 22 HOH HOH . H 4 HOH B 16 616 4 HOH HOH . H 4 HOH B 17 617 37 HOH HOH . H 4 HOH B 18 618 38 HOH HOH . H 4 HOH B 19 619 10 HOH HOH . H 4 HOH B 20 620 42 HOH HOH . H 4 HOH B 21 621 43 HOH HOH . H 4 HOH B 22 622 17 HOH HOH . H 4 HOH B 23 623 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EEY . . . E 2 36.475 37.092 36.465 1 74.41 ? C10 EEY 501 B 1 HETATM 2 N N12 EEY . . . E 2 36.794 35.662 36.711 1 66.02 ? N12 EEY 501 B 1 HETATM 3 C C13 EEY . . . E 2 35.925 34.528 37.137 1 59.86 ? C13 EEY 501 B 1 HETATM 4 C C15 EEY . . . E 2 34.554 32.578 36.625 1 61.28 ? C15 EEY 501 B 1 HETATM 5 C C17 EEY . . . E 2 34.907 33.102 38.802 1 66.82 ? C17 EEY 501 B 1 HETATM 6 C C01 EEY . . . E 2 39.921 39.591 35.291 1 81.2 ? C01 EEY 501 B 1 HETATM 7 C C02 EEY . . . E 2 39.661 39.3 36.629 1 77.33 ? C02 EEY 501 B 1 HETATM 8 C C03 EEY . . . E 2 38.565 38.511 36.985 1 79.25 ? C03 EEY 501 B 1 HETATM 9 C C04 EEY . . . E 2 37.691 38.006 36.017 1 80.79 ? C04 EEY 501 B 1 HETATM 10 C C05 EEY . . . E 2 37.964 38.313 34.663 1 84.99 ? C05 EEY 501 B 1 HETATM 11 C C06 EEY . . . E 2 39.082 39.102 34.302 1 84.4 ? C06 EEY 501 B 1 HETATM 12 C C14 EEY . . . E 2 35.339 33.662 36.227 1 60.37 ? C14 EEY 501 B 1 HETATM 13 C C18 EEY . . . E 2 35.704 34.201 38.461 1 66.13 ? C18 EEY 501 B 1 HETATM 14 N N07 EEY . . . E 2 39.41 39.442 32.898 1 97.05 ? N07 EEY 501 B 1 HETATM 15 N N16 EEY . . . E 2 34.351 32.322 37.894 1 64.8 ? N16 EEY 501 B 1 HETATM 16 O O08 EEY . . . E 2 40.748 39.794 32.587 1 95.85 ? O08 EEY 501 B 1 HETATM 17 O O09 EEY . . . E 2 38.439 39.422 31.862 1 91.06 ? O09 EEY 501 B 1 HETATM 18 O O11 EEY . . . E 2 35.366 37.512 36.601 1 75.45 ? O11 EEY 501 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 26 _model_server_stats.element_count 18 #