data_8ZFW # _model_server_result.job_id I2TmDi8xKL2yHB5yjpXR2A _model_server_result.datetime_utc '2024-10-12 16:37:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zfw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":602}' # _entry.id 8ZFW # _exptl.entry_id 8ZFW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 259.3 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Norbelladine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZFW _cell.length_a 80.501 _cell.length_b 116.587 _cell.length_c 50.297 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZFW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 155 A ASP 155 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 A OD2 ASP 155 A ASP 155 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc3 A OD2 ASP 181 A ASP 181 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc4 A OD1 ASN 182 A ASN 182 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 D MG MG . A MG 502 1_555 J O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc6 D MG MG . A MG 502 1_555 J O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 D MG MG . A MG 502 1_555 J O HOH . A HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc8 B OD1 ASP 155 B ASP 155 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc9 B OD2 ASP 155 B ASP 155 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc10 B OD2 ASP 181 B ASP 181 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc11 B OD1 ASN 182 B ASN 182 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc12 G O15 A1LU2 . B A1LU2 602 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc13 G O17 A1LU2 . B A1LU2 602 1_555 H MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc14 H MG MG . B MG 603 1_555 K O HOH . B HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? # _chem_comp.formula 'C15 H17 N O3' _chem_comp.formula_weight 259.3 _chem_comp.id A1LU2 _chem_comp.mon_nstd_flag . _chem_comp.name Norbelladine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 O01 A1LU2 sing 1 n n C04 C03 A1LU2 doub 2 n y C03 C02 A1LU2 sing 3 n y C05 C02 A1LU2 doub 4 n y C06 C05 A1LU2 sing 5 n y C07 C06 A1LU2 doub 6 n y C08 C07 A1LU2 sing 7 n n C09 C08 A1LU2 sing 8 n n N10 C09 A1LU2 sing 9 n n C11 N10 A1LU2 sing 10 n n C12 C11 A1LU2 sing 11 n n C13 C12 A1LU2 doub 12 n y C14 C13 A1LU2 sing 13 n y O15 C14 A1LU2 sing 14 n n C16 C14 A1LU2 doub 15 n y O17 C16 A1LU2 sing 16 n n C18 C16 A1LU2 sing 17 n y C19 C18 A1LU2 doub 18 n y C04 C07 A1LU2 sing 19 n y C12 C19 A1LU2 sing 20 n y C13 H131 A1LU2 sing 21 n n C03 H031 A1LU2 sing 22 n n C04 H041 A1LU2 sing 23 n n C05 H051 A1LU2 sing 24 n n C06 H061 A1LU2 sing 25 n n C08 H082 A1LU2 sing 26 n n C08 H081 A1LU2 sing 27 n n C09 H091 A1LU2 sing 28 n n C09 H092 A1LU2 sing 29 n n C11 H112 A1LU2 sing 30 n n C11 H111 A1LU2 sing 31 n n C18 H181 A1LU2 sing 32 n n C19 H191 A1LU2 sing 33 n n N10 H1 A1LU2 sing 34 n n O01 H011 A1LU2 sing 35 n n O15 H151 A1LU2 sing 36 n n O17 H171 A1LU2 sing 37 n n # _atom_sites.entry_id 8ZFW _atom_sites.fract_transf_matrix[1][1] 0.012422 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008577 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 501 501 GOL GOL . D 3 MG A 1 502 301 MG MG . E 4 SAH A 1 503 401 SAH SAH . F 2 GOL B 1 601 601 GOL GOL . G 5 A1LU2 B 1 602 701 A1LU2 LIG . H 3 MG B 1 603 301 MG MG . I 4 SAH B 1 604 401 SAH SAH . J 6 HOH A 1 601 91 HOH HOH . J 6 HOH A 2 602 47 HOH HOH . J 6 HOH A 3 603 4 HOH HOH . J 6 HOH A 4 604 50 HOH HOH . J 6 HOH A 5 605 53 HOH HOH . J 6 HOH A 6 606 109 HOH HOH . J 6 HOH A 7 607 90 HOH HOH . J 6 HOH A 8 608 3 HOH HOH . J 6 HOH A 9 609 46 HOH HOH . J 6 HOH A 10 610 117 HOH HOH . J 6 HOH A 11 611 10 HOH HOH . J 6 HOH A 12 612 108 HOH HOH . J 6 HOH A 13 613 12 HOH HOH . J 6 HOH A 14 614 84 HOH HOH . J 6 HOH A 15 615 49 HOH HOH . J 6 HOH A 16 616 16 HOH HOH . J 6 HOH A 17 617 60 HOH HOH . J 6 HOH A 18 618 39 HOH HOH . J 6 HOH A 19 619 20 HOH HOH . J 6 HOH A 20 620 78 HOH HOH . J 6 HOH A 21 621 104 HOH HOH . J 6 HOH A 22 622 44 HOH HOH . J 6 HOH A 23 623 17 HOH HOH . J 6 HOH A 24 624 9 HOH HOH . J 6 HOH A 25 625 18 HOH HOH . J 6 HOH A 26 626 35 HOH HOH . J 6 HOH A 27 627 56 HOH HOH . J 6 HOH A 28 628 8 HOH HOH . J 6 HOH A 29 629 34 HOH HOH . J 6 HOH A 30 630 28 HOH HOH . J 6 HOH A 31 631 37 HOH HOH . J 6 HOH A 32 632 116 HOH HOH . J 6 HOH A 33 633 29 HOH HOH . J 6 HOH A 34 634 59 HOH HOH . J 6 HOH A 35 635 74 HOH HOH . J 6 HOH A 36 636 26 HOH HOH . J 6 HOH A 37 637 72 HOH HOH . J 6 HOH A 38 638 100 HOH HOH . J 6 HOH A 39 639 42 HOH HOH . J 6 HOH A 40 640 2 HOH HOH . J 6 HOH A 41 641 86 HOH HOH . J 6 HOH A 42 642 63 HOH HOH . J 6 HOH A 43 643 83 HOH HOH . J 6 HOH A 44 644 41 HOH HOH . J 6 HOH A 45 645 101 HOH HOH . J 6 HOH A 46 646 80 HOH HOH . J 6 HOH A 47 647 76 HOH HOH . J 6 HOH A 48 648 52 HOH HOH . J 6 HOH A 49 649 85 HOH HOH . J 6 HOH A 50 650 15 HOH HOH . J 6 HOH A 51 651 120 HOH HOH . J 6 HOH A 52 652 51 HOH HOH . J 6 HOH A 53 653 87 HOH HOH . J 6 HOH A 54 654 127 HOH HOH . J 6 HOH A 55 655 122 HOH HOH . J 6 HOH A 56 656 111 HOH HOH . J 6 HOH A 57 657 113 HOH HOH . J 6 HOH A 58 658 58 HOH HOH . J 6 HOH A 59 659 115 HOH HOH . J 6 HOH A 60 660 102 HOH HOH . J 6 HOH A 61 661 118 HOH HOH . J 6 HOH A 62 662 68 HOH HOH . J 6 HOH A 63 663 123 HOH HOH . J 6 HOH A 64 664 119 HOH HOH . J 6 HOH A 65 665 107 HOH HOH . J 6 HOH A 66 666 110 HOH HOH . K 6 HOH B 1 701 55 HOH HOH . K 6 HOH B 2 702 112 HOH HOH . K 6 HOH B 3 703 32 HOH HOH . K 6 HOH B 4 704 22 HOH HOH . K 6 HOH B 5 705 40 HOH HOH . K 6 HOH B 6 706 65 HOH HOH . K 6 HOH B 7 707 81 HOH HOH . K 6 HOH B 8 708 5 HOH HOH . K 6 HOH B 9 709 38 HOH HOH . K 6 HOH B 10 710 54 HOH HOH . K 6 HOH B 11 711 19 HOH HOH . K 6 HOH B 12 712 6 HOH HOH . K 6 HOH B 13 713 64 HOH HOH . K 6 HOH B 14 714 30 HOH HOH . K 6 HOH B 15 715 11 HOH HOH . K 6 HOH B 16 716 7 HOH HOH . K 6 HOH B 17 717 24 HOH HOH . K 6 HOH B 18 718 71 HOH HOH . K 6 HOH B 19 719 99 HOH HOH . K 6 HOH B 20 720 13 HOH HOH . K 6 HOH B 21 721 95 HOH HOH . K 6 HOH B 22 722 88 HOH HOH . K 6 HOH B 23 723 106 HOH HOH . K 6 HOH B 24 724 27 HOH HOH . K 6 HOH B 25 725 69 HOH HOH . K 6 HOH B 26 726 66 HOH HOH . K 6 HOH B 27 727 103 HOH HOH . K 6 HOH B 28 728 126 HOH HOH . K 6 HOH B 29 729 61 HOH HOH . K 6 HOH B 30 730 96 HOH HOH . K 6 HOH B 31 731 25 HOH HOH . K 6 HOH B 32 732 1 HOH HOH . K 6 HOH B 33 733 21 HOH HOH . K 6 HOH B 34 734 33 HOH HOH . K 6 HOH B 35 735 93 HOH HOH . K 6 HOH B 36 736 31 HOH HOH . K 6 HOH B 37 737 89 HOH HOH . K 6 HOH B 38 738 98 HOH HOH . K 6 HOH B 39 739 75 HOH HOH . K 6 HOH B 40 740 57 HOH HOH . K 6 HOH B 41 741 23 HOH HOH . K 6 HOH B 42 742 43 HOH HOH . K 6 HOH B 43 743 45 HOH HOH . K 6 HOH B 44 744 36 HOH HOH . K 6 HOH B 45 745 82 HOH HOH . K 6 HOH B 46 746 70 HOH HOH . K 6 HOH B 47 747 73 HOH HOH . K 6 HOH B 48 748 79 HOH HOH . K 6 HOH B 49 749 14 HOH HOH . K 6 HOH B 50 750 105 HOH HOH . K 6 HOH B 51 751 131 HOH HOH . K 6 HOH B 52 752 77 HOH HOH . K 6 HOH B 53 753 133 HOH HOH . K 6 HOH B 54 754 67 HOH HOH . K 6 HOH B 55 755 125 HOH HOH . K 6 HOH B 56 756 94 HOH HOH . K 6 HOH B 57 757 130 HOH HOH . K 6 HOH B 58 758 129 HOH HOH . K 6 HOH B 59 759 124 HOH HOH . K 6 HOH B 60 760 128 HOH HOH . K 6 HOH B 61 761 114 HOH HOH . K 6 HOH B 62 762 92 HOH HOH . K 6 HOH B 63 763 121 HOH HOH . K 6 HOH B 64 764 48 HOH HOH . K 6 HOH B 65 765 97 HOH HOH . K 6 HOH B 66 766 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 A1LU2 . . . G 5 35.185 45.023 11.195 1 73.78 ? C13 A1LU2 602 B 1 HETATM 2 C C02 A1LU2 . . . G 5 37.085 50.583 13.48 1 101.24 ? C02 A1LU2 602 B 1 HETATM 3 C C03 A1LU2 . . . G 5 38.323 50.574 12.866 1 101.21 ? C03 A1LU2 602 B 1 HETATM 4 C C04 A1LU2 . . . G 5 39.163 49.487 13.022 1 100.39 ? C04 A1LU2 602 B 1 HETATM 5 C C05 A1LU2 . . . G 5 36.67 49.504 14.258 1 100.18 ? C05 A1LU2 602 B 1 HETATM 6 C C06 A1LU2 . . . G 5 37.531 48.424 14.424 1 100.2 ? C06 A1LU2 602 B 1 HETATM 7 C C07 A1LU2 . . . G 5 38.78 48.423 13.808 1 98.68 ? C07 A1LU2 602 B 1 HETATM 8 C C08 A1LU2 . . . G 5 39.748 47.243 13.927 1 92.85 ? C08 A1LU2 602 B 1 HETATM 9 C C09 A1LU2 . . . G 5 39.22 46.015 13.179 1 89.66 ? C09 A1LU2 602 B 1 HETATM 10 C C11 A1LU2 . . . G 5 37.189 46.419 11.828 1 81.9 ? C11 A1LU2 602 B 1 HETATM 11 C C12 A1LU2 . . . G 5 36.489 45.073 11.655 1 77.07 ? C12 A1LU2 602 B 1 HETATM 12 C C14 A1LU2 . . . G 5 34.556 43.792 11.042 1 73.79 ? C14 A1LU2 602 B 1 HETATM 13 C C16 A1LU2 . . . G 5 35.241 42.63 11.353 1 72.43 ? C16 A1LU2 602 B 1 HETATM 14 C C18 A1LU2 . . . G 5 36.537 42.681 11.814 1 74.51 ? C18 A1LU2 602 B 1 HETATM 15 C C19 A1LU2 . . . G 5 37.152 43.901 11.959 1 77.3 ? C19 A1LU2 602 B 1 HETATM 16 N N10 A1LU2 . . . G 5 38.655 46.353 11.867 1 86.73 ? N10 A1LU2 602 B 1 HETATM 17 O O01 A1LU2 . . . G 5 36.263 51.704 13.285 1 102.24 ? O01 A1LU2 602 B 1 HETATM 18 O O15 A1LU2 . . . G 5 33.228 43.698 10.576 1 72.19 ? O15 A1LU2 602 B 1 HETATM 19 O O17 A1LU2 . . . G 5 34.627 41.385 11.207 1 63.37 ? O17 A1LU2 602 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 19 #