data_8ZHY # _model_server_result.job_id gTIYak-Ae_Ca693aUNuicw _model_server_result.datetime_utc '2024-12-22 01:09:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zhy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":404}' # _entry.id 8ZHY # _exptl.entry_id 8ZHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZHY _cell.length_a 86.729 _cell.length_b 93.776 _cell.length_c 166.309 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,S 1 1 D,P,Q,R,V 1 2 B,C,J,K,L,M,N,O,T,U 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_644 -x+1,-y-1/2,z-1/2 -1 0 0 0 -1 0 0 0 1 86.729 -46.888 -83.1545 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 O N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 179 A HIS 159 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 A OD1 ASN 221 A ASN 201 1_555 Q MG MG . D MG 402 4_644 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc3 A NE2 HIS 223 A HIS 203 1_555 P ZN ZN . D ZN 401 4_644 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc4 A OE1 GLU 233 A GLU 213 1_555 Q MG MG . D MG 402 4_644 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc5 A NE2 HIS 275 A HIS 255 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc6 H ZN ZN . A ZN 404 4_645 D NE2 HIS 223 D HIS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc7 S O HOH . A HOH 533 4_645 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc8 K MG MG . B MG 402 1_555 T O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc9 C NE2 HIS 179 C HIS 159 1_555 O ZN ZN . C ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc10 D NE2 HIS 179 D HIS 159 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc11 D OG SER 190 D SER 170 1_555 R NA NA . D NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc12 D NE2 HIS 275 D HIS 255 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ZHY _atom_sites.fract_transf_matrix[1][1] 0.01153 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010664 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO A 1 401 402 EDO EDO . F 2 EDO A 1 402 403 EDO EDO . G 2 EDO A 1 403 404 EDO EDO . H 3 ZN A 1 404 4 ZN ZN . I 4 NA A 1 405 2 NA NA . J 5 CO2 B 1 401 402 CO2 CO2 . K 6 MG B 1 402 3 MG MG . L 5 CO2 C 1 401 403 CO2 CO2 . M 2 EDO C 1 402 402 EDO EDO . N 5 CO2 C 1 403 403 CO2 CO2 . O 3 ZN C 1 404 5 ZN ZN . P 3 ZN D 1 401 1 ZN ZN . Q 6 MG D 1 402 1 MG MG . R 4 NA D 1 403 1 NA NA . S 7 HOH A 1 501 334 HOH HOH . S 7 HOH A 2 502 215 HOH HOH . S 7 HOH A 3 503 244 HOH HOH . S 7 HOH A 4 504 235 HOH HOH . S 7 HOH A 5 505 256 HOH HOH . S 7 HOH A 6 506 140 HOH HOH . S 7 HOH A 7 507 251 HOH HOH . S 7 HOH A 8 508 163 HOH HOH . S 7 HOH A 9 509 198 HOH HOH . S 7 HOH A 10 510 188 HOH HOH . S 7 HOH A 11 511 279 HOH HOH . S 7 HOH A 12 512 273 HOH HOH . S 7 HOH A 13 513 242 HOH HOH . S 7 HOH A 14 514 223 HOH HOH . S 7 HOH A 15 515 226 HOH HOH . S 7 HOH A 16 516 24 HOH HOH . S 7 HOH A 17 517 277 HOH HOH . S 7 HOH A 18 518 239 HOH HOH . S 7 HOH A 19 519 258 HOH HOH . S 7 HOH A 20 520 150 HOH HOH . S 7 HOH A 21 521 266 HOH HOH . S 7 HOH A 22 522 274 HOH HOH . S 7 HOH A 23 523 164 HOH HOH . S 7 HOH A 24 524 241 HOH HOH . S 7 HOH A 25 525 316 HOH HOH . S 7 HOH A 26 526 229 HOH HOH . S 7 HOH A 27 527 243 HOH HOH . S 7 HOH A 28 528 240 HOH HOH . S 7 HOH A 29 529 234 HOH HOH . S 7 HOH A 30 530 197 HOH HOH . S 7 HOH A 31 531 136 HOH HOH . S 7 HOH A 32 532 135 HOH HOH . S 7 HOH A 33 533 331 HOH HOH . S 7 HOH A 34 534 343 HOH HOH . S 7 HOH A 35 535 145 HOH HOH . S 7 HOH A 36 536 333 HOH HOH . S 7 HOH A 37 537 345 HOH HOH . S 7 HOH A 38 538 342 HOH HOH . S 7 HOH A 39 539 236 HOH HOH . S 7 HOH A 40 540 149 HOH HOH . S 7 HOH A 41 541 326 HOH HOH . S 7 HOH A 42 542 227 HOH HOH . S 7 HOH A 43 543 328 HOH HOH . S 7 HOH A 44 544 254 HOH HOH . S 7 HOH A 45 545 327 HOH HOH . S 7 HOH A 46 546 120 HOH HOH . S 7 HOH A 47 547 265 HOH HOH . T 7 HOH B 1 501 323 HOH HOH . T 7 HOH B 2 502 162 HOH HOH . T 7 HOH B 3 503 336 HOH HOH . T 7 HOH B 4 504 271 HOH HOH . T 7 HOH B 5 505 146 HOH HOH . T 7 HOH B 6 506 205 HOH HOH . T 7 HOH B 7 507 245 HOH HOH . T 7 HOH B 8 508 294 HOH HOH . T 7 HOH B 9 509 100 HOH HOH . T 7 HOH B 10 510 30 HOH HOH . T 7 HOH B 11 511 147 HOH HOH . T 7 HOH B 12 512 210 HOH HOH . T 7 HOH B 13 513 224 HOH HOH . T 7 HOH B 14 514 143 HOH HOH . T 7 HOH B 15 515 190 HOH HOH . T 7 HOH B 16 516 281 HOH HOH . T 7 HOH B 17 517 250 HOH HOH . T 7 HOH B 18 518 155 HOH HOH . T 7 HOH B 19 519 173 HOH HOH . T 7 HOH B 20 520 99 HOH HOH . T 7 HOH B 21 521 282 HOH HOH . T 7 HOH B 22 522 324 HOH HOH . T 7 HOH B 23 523 166 HOH HOH . T 7 HOH B 24 524 302 HOH HOH . T 7 HOH B 25 525 141 HOH HOH . T 7 HOH B 26 526 208 HOH HOH . T 7 HOH B 27 527 231 HOH HOH . U 7 HOH C 1 501 289 HOH HOH . U 7 HOH C 2 502 159 HOH HOH . U 7 HOH C 3 503 301 HOH HOH . U 7 HOH C 4 504 306 HOH HOH . U 7 HOH C 5 505 192 HOH HOH . U 7 HOH C 6 506 29 HOH HOH . U 7 HOH C 7 507 286 HOH HOH . U 7 HOH C 8 508 325 HOH HOH . U 7 HOH C 9 509 291 HOH HOH . U 7 HOH C 10 510 290 HOH HOH . U 7 HOH C 11 511 296 HOH HOH . U 7 HOH C 12 512 288 HOH HOH . U 7 HOH C 13 513 247 HOH HOH . U 7 HOH C 14 514 304 HOH HOH . U 7 HOH C 15 515 295 HOH HOH . U 7 HOH C 16 516 300 HOH HOH . U 7 HOH C 17 517 151 HOH HOH . U 7 HOH C 18 518 72 HOH HOH . U 7 HOH C 19 519 137 HOH HOH . U 7 HOH C 20 520 263 HOH HOH . U 7 HOH C 21 521 284 HOH HOH . U 7 HOH C 22 522 321 HOH HOH . U 7 HOH C 23 523 139 HOH HOH . U 7 HOH C 24 524 212 HOH HOH . U 7 HOH C 25 525 305 HOH HOH . U 7 HOH C 26 526 203 HOH HOH . U 7 HOH C 27 527 299 HOH HOH . U 7 HOH C 28 528 293 HOH HOH . U 7 HOH C 29 529 202 HOH HOH . U 7 HOH C 30 530 262 HOH HOH . U 7 HOH C 31 531 339 HOH HOH . U 7 HOH C 32 532 36 HOH HOH . U 7 HOH C 33 533 160 HOH HOH . U 7 HOH C 34 534 264 HOH HOH . U 7 HOH C 35 535 287 HOH HOH . U 7 HOH C 36 536 161 HOH HOH . V 7 HOH D 1 501 315 HOH HOH . V 7 HOH D 2 502 52 HOH HOH . V 7 HOH D 3 503 211 HOH HOH . V 7 HOH D 4 504 186 HOH HOH . V 7 HOH D 5 505 330 HOH HOH . V 7 HOH D 6 506 312 HOH HOH . V 7 HOH D 7 507 260 HOH HOH . V 7 HOH D 8 508 180 HOH HOH . V 7 HOH D 9 509 214 HOH HOH . V 7 HOH D 10 510 341 HOH HOH . V 7 HOH D 11 511 181 HOH HOH . V 7 HOH D 12 512 308 HOH HOH . V 7 HOH D 13 513 332 HOH HOH . V 7 HOH D 14 514 142 HOH HOH . V 7 HOH D 15 515 309 HOH HOH . V 7 HOH D 16 516 185 HOH HOH . V 7 HOH D 17 517 25 HOH HOH . V 7 HOH D 18 518 191 HOH HOH . V 7 HOH D 19 519 340 HOH HOH . V 7 HOH D 20 520 232 HOH HOH . V 7 HOH D 21 521 311 HOH HOH . V 7 HOH D 22 522 199 HOH HOH . V 7 HOH D 23 523 338 HOH HOH . V 7 HOH D 24 524 259 HOH HOH . V 7 HOH D 25 525 249 HOH HOH . V 7 HOH D 26 526 216 HOH HOH . V 7 HOH D 27 527 237 HOH HOH . V 7 HOH D 28 528 189 HOH HOH . V 7 HOH D 29 529 187 HOH HOH . V 7 HOH D 30 530 206 HOH HOH . V 7 HOH D 31 531 310 HOH HOH . V 7 HOH D 32 532 313 HOH HOH . V 7 HOH D 33 533 156 HOH HOH . V 7 HOH D 34 534 344 HOH HOH . V 7 HOH D 35 535 267 HOH HOH . V 7 HOH D 36 536 66 HOH HOH . V 7 HOH D 37 537 303 HOH HOH . V 7 HOH D 38 538 329 HOH HOH . V 7 HOH D 39 539 257 HOH HOH . V 7 HOH D 40 540 268 HOH HOH . V 7 HOH D 41 541 133 HOH HOH . V 7 HOH D 42 542 138 HOH HOH . V 7 HOH D 43 543 184 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.334 _atom_site.Cartn_y -24.212 _atom_site.Cartn_z 25.701 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 404 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #