data_8ZI8 # _model_server_result.job_id DV783NxtnnNGLTukfLmwSw _model_server_result.datetime_utc '2024-12-30 17:16:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zi8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 8ZI8 # _exptl.entry_id 8ZI8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZI8 _cell.length_a 86.549 _cell.length_b 94.717 _cell.length_c 166.714 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZI8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression D,I,J,K,L,M,N,R 1 1 A,E,F,G,O 1 2 B,C,H,P,Q 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_654 -x+1,-y+1/2,z-1/2 -1 0 0 0 -1 0 0 0 1 86.549 47.3585 -83.357 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 179 A HIS 159 1_555 G ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc2 A NE2 HIS 223 A HIS 203 1_555 M ZN ZN . D ZN 405 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc3 A NE2 HIS 275 A HIS 255 1_555 G ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 F OAB GTQ . A GTQ 402 1_555 G ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc5 G ZN ZN . A ZN 403 4_654 D NE2 HIS 223 D HIS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc6 B NE2 HIS 223 B HIS 203 1_555 H ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc7 C NE2 HIS 275 C HIS 255 1_555 H ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc8 D NE2 HIS 179 D HIS 159 1_555 M ZN ZN . D ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc9 D NE2 HIS 275 D HIS 255 1_555 M ZN ZN . D ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc10 I OAA GTQ . D GTQ 401 1_555 M ZN ZN . D ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ZI8 _atom_sites.fract_transf_matrix[1][1] 0.011554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005998 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CO2 A 1 401 404 CO2 CO2 . F 3 GTQ A 1 402 409 GTQ LIG . G 4 ZN A 1 403 1 ZN ZN . H 4 ZN C 1 401 3 ZN ZN . I 3 GTQ D 1 401 403 GTQ LIG . J 2 CO2 D 1 402 404 CO2 CO2 . K 5 EDO D 1 403 406 EDO EDO . L 5 EDO D 1 404 407 EDO EDO . M 4 ZN D 1 405 4 ZN ZN . N 6 CL D 1 406 2 CL CL . O 7 HOH A 1 501 178 HOH HOH . O 7 HOH A 2 502 4 HOH HOH . O 7 HOH A 3 503 58 HOH HOH . O 7 HOH A 4 504 66 HOH HOH . O 7 HOH A 5 505 39 HOH HOH . O 7 HOH A 6 506 75 HOH HOH . O 7 HOH A 7 507 50 HOH HOH . O 7 HOH A 8 508 112 HOH HOH . O 7 HOH A 9 509 84 HOH HOH . O 7 HOH A 10 510 89 HOH HOH . O 7 HOH A 11 511 69 HOH HOH . O 7 HOH A 12 512 102 HOH HOH . O 7 HOH A 13 513 23 HOH HOH . O 7 HOH A 14 514 79 HOH HOH . O 7 HOH A 15 515 93 HOH HOH . O 7 HOH A 16 516 117 HOH HOH . O 7 HOH A 17 517 92 HOH HOH . O 7 HOH A 18 518 191 HOH HOH . O 7 HOH A 19 519 21 HOH HOH . O 7 HOH A 20 520 164 HOH HOH . O 7 HOH A 21 521 90 HOH HOH . O 7 HOH A 22 522 64 HOH HOH . O 7 HOH A 23 523 119 HOH HOH . O 7 HOH A 24 524 180 HOH HOH . O 7 HOH A 25 525 5 HOH HOH . O 7 HOH A 26 526 29 HOH HOH . O 7 HOH A 27 527 173 HOH HOH . O 7 HOH A 28 528 85 HOH HOH . O 7 HOH A 29 529 111 HOH HOH . O 7 HOH A 30 530 116 HOH HOH . O 7 HOH A 31 531 59 HOH HOH . O 7 HOH A 32 532 80 HOH HOH . O 7 HOH A 33 533 49 HOH HOH . O 7 HOH A 34 534 26 HOH HOH . O 7 HOH A 35 535 32 HOH HOH . O 7 HOH A 36 536 189 HOH HOH . O 7 HOH A 37 537 91 HOH HOH . O 7 HOH A 38 538 24 HOH HOH . O 7 HOH A 39 539 18 HOH HOH . O 7 HOH A 40 540 110 HOH HOH . O 7 HOH A 41 541 170 HOH HOH . O 7 HOH A 42 542 86 HOH HOH . O 7 HOH A 43 543 121 HOH HOH . O 7 HOH A 44 544 17 HOH HOH . O 7 HOH A 45 545 7 HOH HOH . O 7 HOH A 46 546 22 HOH HOH . O 7 HOH A 47 547 172 HOH HOH . O 7 HOH A 48 548 103 HOH HOH . O 7 HOH A 49 549 163 HOH HOH . O 7 HOH A 50 550 190 HOH HOH . O 7 HOH A 51 551 167 HOH HOH . O 7 HOH A 52 552 184 HOH HOH . O 7 HOH A 53 553 162 HOH HOH . O 7 HOH A 54 554 94 HOH HOH . P 7 HOH B 1 401 45 HOH HOH . P 7 HOH B 2 402 124 HOH HOH . P 7 HOH B 3 403 132 HOH HOH . P 7 HOH B 4 404 126 HOH HOH . P 7 HOH B 5 405 60 HOH HOH . P 7 HOH B 6 406 31 HOH HOH . P 7 HOH B 7 407 127 HOH HOH . P 7 HOH B 8 408 123 HOH HOH . P 7 HOH B 9 409 128 HOH HOH . P 7 HOH B 10 410 76 HOH HOH . P 7 HOH B 11 411 30 HOH HOH . P 7 HOH B 12 412 185 HOH HOH . P 7 HOH B 13 413 42 HOH HOH . P 7 HOH B 14 414 70 HOH HOH . P 7 HOH B 15 415 118 HOH HOH . Q 7 HOH C 1 501 193 HOH HOH . Q 7 HOH C 2 502 159 HOH HOH . Q 7 HOH C 3 503 135 HOH HOH . Q 7 HOH C 4 504 37 HOH HOH . Q 7 HOH C 5 505 33 HOH HOH . Q 7 HOH C 6 506 72 HOH HOH . Q 7 HOH C 7 507 133 HOH HOH . Q 7 HOH C 8 508 44 HOH HOH . Q 7 HOH C 9 509 194 HOH HOH . Q 7 HOH C 10 510 154 HOH HOH . R 7 HOH D 1 501 14 HOH HOH . R 7 HOH D 2 502 152 HOH HOH . R 7 HOH D 3 503 142 HOH HOH . R 7 HOH D 4 504 99 HOH HOH . R 7 HOH D 5 505 141 HOH HOH . R 7 HOH D 6 506 188 HOH HOH . R 7 HOH D 7 507 183 HOH HOH . R 7 HOH D 8 508 57 HOH HOH . R 7 HOH D 9 509 20 HOH HOH . R 7 HOH D 10 510 95 HOH HOH . R 7 HOH D 11 511 144 HOH HOH . R 7 HOH D 12 512 71 HOH HOH . R 7 HOH D 13 513 156 HOH HOH . R 7 HOH D 14 514 150 HOH HOH . R 7 HOH D 15 515 108 HOH HOH . R 7 HOH D 16 516 78 HOH HOH . R 7 HOH D 17 517 25 HOH HOH . R 7 HOH D 18 518 148 HOH HOH . R 7 HOH D 19 519 192 HOH HOH . R 7 HOH D 20 520 35 HOH HOH . R 7 HOH D 21 521 28 HOH HOH . R 7 HOH D 22 522 143 HOH HOH . R 7 HOH D 23 523 140 HOH HOH . R 7 HOH D 24 524 2 HOH HOH . R 7 HOH D 25 525 77 HOH HOH . R 7 HOH D 26 526 9 HOH HOH . R 7 HOH D 27 527 10 HOH HOH . R 7 HOH D 28 528 54 HOH HOH . R 7 HOH D 29 529 158 HOH HOH . R 7 HOH D 30 530 41 HOH HOH . R 7 HOH D 31 531 179 HOH HOH . R 7 HOH D 32 532 36 HOH HOH . R 7 HOH D 33 533 34 HOH HOH . R 7 HOH D 34 534 13 HOH HOH . R 7 HOH D 35 535 187 HOH HOH . R 7 HOH D 36 536 147 HOH HOH . R 7 HOH D 37 537 181 HOH HOH . R 7 HOH D 38 538 100 HOH HOH . R 7 HOH D 39 539 160 HOH HOH . R 7 HOH D 40 540 109 HOH HOH . R 7 HOH D 41 541 151 HOH HOH . R 7 HOH D 42 542 182 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 4.172 _atom_site.Cartn_y 25.143 _atom_site.Cartn_z -24.942 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 103 _model_server_stats.create_model_time_ms 187 _model_server_stats.query_time_ms 437 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #