data_8ZIN # _model_server_result.job_id Y7PNIlxn6R1tqltEbolsoQ _model_server_result.datetime_utc '2024-11-07 19:16:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":401}' # _entry.id 8ZIN # _exptl.entry_id 8ZIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2,4-DIHYDROXYBENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZIN _cell.length_a 86.295 _cell.length_b 93.632 _cell.length_c 165.595 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 179 A HIS 159 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 A NE2 HIS 223 A HIS 203 1_555 S ZN ZN . D ZN 404 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc3 A NE2 HIS 275 A HIS 255 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc4 G O1' DOB . A DOB 403 1_555 H ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc5 H ZN ZN . A ZN 404 4_554 D NE2 HIS 223 D HIS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc6 B NE2 HIS 179 B HIS 159 1_555 M ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc7 B NE2 HIS 223 B HIS 203 1_555 N ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc8 B NE2 HIS 275 B HIS 255 1_555 M ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc9 M ZN ZN . B ZN 401 1_555 V O HOH . B HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc10 M ZN ZN . B ZN 401 1_555 C NE2 HIS 223 C HIS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc11 C NE2 HIS 179 C HIS 159 1_555 N ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc12 C NE2 HIS 275 C HIS 255 1_555 N ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc13 N ZN ZN . C ZN 401 1_555 W O HOH . C HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc14 D NE2 HIS 179 D HIS 159 1_555 S ZN ZN . D ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc15 D NE2 HIS 275 D HIS 255 1_555 S ZN ZN . D ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc16 P O2' DOB . D DOB 401 1_555 S ZN ZN . D ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc17 P O2 DOB . D DOB 401 1_555 S ZN ZN . D ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'C7 H6 O4' _chem_comp.formula_weight 154.12 _chem_comp.id DOB _chem_comp.mon_nstd_flag . _chem_comp.name '2,4-DIHYDROXYBENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' DOB doub 85 n n C1' O2' DOB sing 86 n n C1' C1 DOB sing 87 n n O2' HO2' DOB sing 88 n n C1 C2 DOB sing 89 n y C1 C6 DOB doub 90 n y C2 C3 DOB doub 91 n y C2 O2 DOB sing 92 n n C3 C4 DOB sing 93 n y C3 H3 DOB sing 94 n n C4 C5 DOB doub 95 n y C4 O4 DOB sing 96 n n C5 C6 DOB sing 97 n y C5 H5 DOB sing 98 n n C6 H6 DOB sing 99 n n O2 HO2 DOB sing 100 n n O4 HO4 DOB sing 101 n n # _atom_sites.entry_id 8ZIN _atom_sites.fract_transf_matrix[1][1] 0.011588 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01068 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 401 402 GOL GOL . F 3 EDO A 1 402 403 EDO EDO . G 4 DOB A 1 403 404 DOB LIG . H 5 ZN A 1 404 6 ZN ZN . I 3 EDO A 1 405 2 EDO EDO . J 3 EDO A 1 406 3 EDO EDO . K 3 EDO A 1 407 4 EDO EDO . L 3 EDO A 1 408 5 EDO EDO . M 5 ZN B 1 401 4 ZN ZN . N 5 ZN C 1 401 5 ZN ZN . O 6 CL C 1 402 1 CL CL . P 4 DOB D 1 401 403 DOB LIG . Q 7 CO2 D 1 402 404 CO2 CO2 . R 7 CO2 D 1 403 405 CO2 CO2 . S 5 ZN D 1 404 3 ZN ZN . T 3 EDO D 1 405 1 EDO EDO . U 8 HOH A 1 501 10 HOH HOH . U 8 HOH A 2 502 286 HOH HOH . U 8 HOH A 3 503 205 HOH HOH . U 8 HOH A 4 504 212 HOH HOH . U 8 HOH A 5 505 203 HOH HOH . U 8 HOH A 6 506 211 HOH HOH . U 8 HOH A 7 507 179 HOH HOH . U 8 HOH A 8 508 218 HOH HOH . U 8 HOH A 9 509 206 HOH HOH . U 8 HOH A 10 510 217 HOH HOH . U 8 HOH A 11 511 63 HOH HOH . U 8 HOH A 12 512 284 HOH HOH . U 8 HOH A 13 513 308 HOH HOH . U 8 HOH A 14 514 174 HOH HOH . U 8 HOH A 15 515 299 HOH HOH . U 8 HOH A 16 516 38 HOH HOH . U 8 HOH A 17 517 304 HOH HOH . U 8 HOH A 18 518 305 HOH HOH . U 8 HOH A 19 519 295 HOH HOH . U 8 HOH A 20 520 183 HOH HOH . U 8 HOH A 21 521 309 HOH HOH . U 8 HOH A 22 522 207 HOH HOH . U 8 HOH A 23 523 119 HOH HOH . U 8 HOH A 24 524 215 HOH HOH . U 8 HOH A 25 525 297 HOH HOH . U 8 HOH A 26 526 18 HOH HOH . U 8 HOH A 27 527 161 HOH HOH . U 8 HOH A 28 528 128 HOH HOH . U 8 HOH A 29 529 298 HOH HOH . V 8 HOH B 1 501 67 HOH HOH . V 8 HOH B 2 502 227 HOH HOH . V 8 HOH B 3 503 231 HOH HOH . V 8 HOH B 4 504 223 HOH HOH . V 8 HOH B 5 505 221 HOH HOH . V 8 HOH B 6 506 151 HOH HOH . V 8 HOH B 7 507 116 HOH HOH . V 8 HOH B 8 508 222 HOH HOH . V 8 HOH B 9 509 224 HOH HOH . V 8 HOH B 10 510 82 HOH HOH . V 8 HOH B 11 511 274 HOH HOH . V 8 HOH B 12 512 273 HOH HOH . V 8 HOH B 13 513 271 HOH HOH . V 8 HOH B 14 514 108 HOH HOH . V 8 HOH B 15 515 220 HOH HOH . V 8 HOH B 16 516 226 HOH HOH . V 8 HOH B 17 517 29 HOH HOH . V 8 HOH B 18 518 70 HOH HOH . V 8 HOH B 19 519 272 HOH HOH . V 8 HOH B 20 520 317 HOH HOH . V 8 HOH B 21 521 229 HOH HOH . V 8 HOH B 22 522 318 HOH HOH . V 8 HOH B 23 523 135 HOH HOH . V 8 HOH B 24 524 105 HOH HOH . V 8 HOH B 25 525 232 HOH HOH . W 8 HOH C 1 501 233 HOH HOH . W 8 HOH C 2 502 247 HOH HOH . W 8 HOH C 3 503 245 HOH HOH . W 8 HOH C 4 504 239 HOH HOH . W 8 HOH C 5 505 248 HOH HOH . W 8 HOH C 6 506 277 HOH HOH . W 8 HOH C 7 507 234 HOH HOH . W 8 HOH C 8 508 132 HOH HOH . W 8 HOH C 9 509 39 HOH HOH . W 8 HOH C 10 510 316 HOH HOH . W 8 HOH C 11 511 279 HOH HOH . W 8 HOH C 12 512 246 HOH HOH . W 8 HOH C 13 513 238 HOH HOH . W 8 HOH C 14 514 134 HOH HOH . W 8 HOH C 15 515 241 HOH HOH . W 8 HOH C 16 516 244 HOH HOH . W 8 HOH C 17 517 139 HOH HOH . W 8 HOH C 18 518 312 HOH HOH . W 8 HOH C 19 519 30 HOH HOH . W 8 HOH C 20 520 243 HOH HOH . W 8 HOH C 21 521 242 HOH HOH . W 8 HOH C 22 522 1 HOH HOH . X 8 HOH D 1 501 249 HOH HOH . X 8 HOH D 2 502 302 HOH HOH . X 8 HOH D 3 503 9 HOH HOH . X 8 HOH D 4 504 261 HOH HOH . X 8 HOH D 5 505 262 HOH HOH . X 8 HOH D 6 506 252 HOH HOH . X 8 HOH D 7 507 164 HOH HOH . X 8 HOH D 8 508 90 HOH HOH . X 8 HOH D 9 509 307 HOH HOH . X 8 HOH D 10 510 311 HOH HOH . X 8 HOH D 11 511 257 HOH HOH . X 8 HOH D 12 512 15 HOH HOH . X 8 HOH D 13 513 282 HOH HOH . X 8 HOH D 14 514 145 HOH HOH . X 8 HOH D 15 515 149 HOH HOH . X 8 HOH D 16 516 61 HOH HOH . X 8 HOH D 17 517 32 HOH HOH . X 8 HOH D 18 518 259 HOH HOH . X 8 HOH D 19 519 36 HOH HOH . X 8 HOH D 20 520 154 HOH HOH . X 8 HOH D 21 521 137 HOH HOH . X 8 HOH D 22 522 291 HOH HOH . X 8 HOH D 23 523 155 HOH HOH . X 8 HOH D 24 524 292 HOH HOH . X 8 HOH D 25 525 202 HOH HOH . X 8 HOH D 26 526 146 HOH HOH . X 8 HOH D 27 527 287 HOH HOH . X 8 HOH D 28 528 265 HOH HOH . X 8 HOH D 29 529 199 HOH HOH . X 8 HOH D 30 530 303 HOH HOH . X 8 HOH D 31 531 65 HOH HOH . X 8 HOH D 32 532 281 HOH HOH . X 8 HOH D 33 533 136 HOH HOH . X 8 HOH D 34 534 264 HOH HOH . X 8 HOH D 35 535 310 HOH HOH . X 8 HOH D 36 536 306 HOH HOH . X 8 HOH D 37 537 294 HOH HOH . X 8 HOH D 38 538 170 HOH HOH . X 8 HOH D 39 539 196 HOH HOH . X 8 HOH D 40 540 54 HOH HOH . X 8 HOH D 41 541 314 HOH HOH . X 8 HOH D 42 542 52 HOH HOH . X 8 HOH D 43 543 142 HOH HOH . X 8 HOH D 44 544 185 HOH HOH . X 8 HOH D 45 545 268 HOH HOH . X 8 HOH D 46 546 301 HOH HOH . X 8 HOH D 47 547 293 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' DOB . . . P 4 -5.931 22.747 -47.44 1 36.39 0 C1' DOB 401 D 1 HETATM 2 O O1' DOB . . . P 4 -7.012 22.118 -47.535 1 33.97 -1 O1' DOB 401 D 1 HETATM 3 O O2' DOB . . . P 4 -5.48 23.519 -48.312 1 36.59 0 O2' DOB 401 D 1 HETATM 4 C C1 DOB . . . P 4 -5.119 22.511 -46.218 1 38.95 0 C1 DOB 401 D 1 HETATM 5 C C2 DOB . . . P 4 -3.765 22.21 -46.35 1 39.09 0 C2 DOB 401 D 1 HETATM 6 C C3 DOB . . . P 4 -3.013 21.947 -45.17 1 38.5 0 C3 DOB 401 D 1 HETATM 7 C C4 DOB . . . P 4 -3.621 21.954 -43.93 1 38.18 0 C4 DOB 401 D 1 HETATM 8 C C5 DOB . . . P 4 -4.979 22.223 -43.813 1 41.45 0 C5 DOB 401 D 1 HETATM 9 C C6 DOB . . . P 4 -5.715 22.507 -44.953 1 41.87 0 C6 DOB 401 D 1 HETATM 10 O O2 DOB . . . P 4 -3.182 22.198 -47.455 1 40.29 0 O2 DOB 401 D 1 HETATM 11 O O4 DOB . . . P 4 -2.809 21.708 -42.869 1 39.47 0 O4 DOB 401 D 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 112 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 11 #