data_8ZJ7
#
_model_server_result.job_id            cmd5MFveYy8Cx1Z7N04GVw 
_model_server_result.datetime_utc      '2024-11-17 20:32:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8zj7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":402}' 
#
_entry.id    8ZJ7 
#
_exptl.entry_id    8ZJ7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.12 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3,4-DIHYDROXYBENZOIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ZJ7 
_cell.length_a            87.303 
_cell.length_b            98.148 
_cell.length_c            168.036 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZJ7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,J,K,L,M,Q,S 1 1 
B,D,G,H,I,N,O,P,R,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 160 B HIS 159 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc2 A NE2 HIS 204 B HIS 203 1_555 K ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc3 B NE2 HIS 160 C HIS 159 1_555 H ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc4 B NE2 HIS 204 C HIS 203 1_555 P ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? 
metalc ? metalc5 B NE2 HIS 256 C HIS 255 1_555 H ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc6 H ZN ZN . C ZN 402 1_555 D NE2 HIS 204 A HIS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc7 I MG MG . C MG 403 1_555 D OD1 ASP 257 A ASP 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc8 C NE2 HIS 160 D HIS 159 1_555 K ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc9 C NE2 HIS 256 D HIS 255 1_555 K ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc10 J O2 DHB . D DHB 401 1_555 K ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc11 D NE2 HIS 160 A HIS 159 1_555 P ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc12 D NE2 HIS 256 A HIS 255 1_555 P ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
#
_chem_comp.formula           'C7 H6 O4' 
_chem_comp.formula_weight    154.12 
_chem_comp.id                DHB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3,4-DIHYDROXYBENZOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DHB doub 83 n y 
C1 C6 DHB sing 84 n y 
C1 C DHB sing 85 n n 
C2 C3 DHB sing 86 n y 
C2 H2 DHB sing 87 n n 
C3 O3 DHB sing 88 n n 
C3 C4 DHB doub 89 n y 
O3 HO3 DHB sing 90 n n 
C4 O4 DHB sing 91 n n 
C4 C5 DHB sing 92 n y 
O4 HO4 DHB sing 93 n n 
C5 C6 DHB doub 94 n y 
C5 H5 DHB sing 95 n n 
C6 H6 DHB sing 96 n n 
C O1 DHB doub 97 n n 
C O2 DHB sing 98 n n 
O2 HO2 DHB sing 99 n n 
#
_atom_sites.entry_id                     8ZJ7 
_atom_sites.fract_transf_matrix[1][1]    0.011454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010189 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005951 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD B 1 401 401 NAD NAD . 
F 3 ZN B 1 402 1 ZN ZN . 
G 4 DHB C 1 401 401 DHB DHB . 
H 3 ZN C 1 402 3 ZN ZN . 
I 5 MG C 1 403 1 MG MG . 
J 4 DHB D 1 401 401 DHB DHB . 
K 3 ZN D 1 402 4 ZN ZN . 
L 6 CL D 1 403 1 CL CL . 
M 7 NA D 1 404 1 NA NA . 
N 2 NAD A 1 401 406 NAD NAD . 
O 4 DHB A 1 402 407 DHB DHB . 
P 3 ZN A 1 403 5 ZN ZN . 
Q 8 HOH B 1 501 88 HOH HOH . 
Q 8 HOH B 2 502 56 HOH HOH . 
Q 8 HOH B 3 503 90 HOH HOH . 
Q 8 HOH B 4 504 94 HOH HOH . 
Q 8 HOH B 5 505 85 HOH HOH . 
Q 8 HOH B 6 506 98 HOH HOH . 
Q 8 HOH B 7 507 92 HOH HOH . 
Q 8 HOH B 8 508 99 HOH HOH . 
Q 8 HOH B 9 509 103 HOH HOH . 
Q 8 HOH B 10 510 96 HOH HOH . 
Q 8 HOH B 11 511 40 HOH HOH . 
Q 8 HOH B 12 512 61 HOH HOH . 
Q 8 HOH B 13 513 95 HOH HOH . 
Q 8 HOH B 14 514 68 HOH HOH . 
Q 8 HOH B 15 515 102 HOH HOH . 
Q 8 HOH B 16 516 93 HOH HOH . 
Q 8 HOH B 17 517 15 HOH HOH . 
Q 8 HOH B 18 518 12 HOH HOH . 
Q 8 HOH B 19 519 48 HOH HOH . 
Q 8 HOH B 20 520 80 HOH HOH . 
Q 8 HOH B 21 521 136 HOH HOH . 
Q 8 HOH B 22 522 14 HOH HOH . 
Q 8 HOH B 23 523 100 HOH HOH . 
Q 8 HOH B 24 524 91 HOH HOH . 
Q 8 HOH B 25 525 97 HOH HOH . 
Q 8 HOH B 26 526 44 HOH HOH . 
Q 8 HOH B 27 527 2 HOH HOH . 
Q 8 HOH B 28 528 23 HOH HOH . 
Q 8 HOH B 29 529 58 HOH HOH . 
Q 8 HOH B 30 530 137 HOH HOH . 
Q 8 HOH B 31 531 104 HOH HOH . 
Q 8 HOH B 32 532 42 HOH HOH . 
Q 8 HOH B 33 533 134 HOH HOH . 
Q 8 HOH B 34 534 59 HOH HOH . 
Q 8 HOH B 35 535 63 HOH HOH . 
Q 8 HOH B 36 536 86 HOH HOH . 
R 8 HOH C 1 501 109 HOH HOH . 
R 8 HOH C 2 502 30 HOH HOH . 
R 8 HOH C 3 503 128 HOH HOH . 
R 8 HOH C 4 504 132 HOH HOH . 
R 8 HOH C 5 505 55 HOH HOH . 
R 8 HOH C 6 506 62 HOH HOH . 
R 8 HOH C 7 507 32 HOH HOH . 
R 8 HOH C 8 508 110 HOH HOH . 
R 8 HOH C 9 509 82 HOH HOH . 
R 8 HOH C 10 510 115 HOH HOH . 
R 8 HOH C 11 511 36 HOH HOH . 
R 8 HOH C 12 512 133 HOH HOH . 
R 8 HOH C 13 513 39 HOH HOH . 
R 8 HOH C 14 514 107 HOH HOH . 
R 8 HOH C 15 515 28 HOH HOH . 
R 8 HOH C 16 516 52 HOH HOH . 
R 8 HOH C 17 517 111 HOH HOH . 
R 8 HOH C 18 518 117 HOH HOH . 
R 8 HOH C 19 519 106 HOH HOH . 
R 8 HOH C 20 520 20 HOH HOH . 
R 8 HOH C 21 521 31 HOH HOH . 
R 8 HOH C 22 522 78 HOH HOH . 
R 8 HOH C 23 523 135 HOH HOH . 
R 8 HOH C 24 524 24 HOH HOH . 
R 8 HOH C 25 525 49 HOH HOH . 
R 8 HOH C 26 526 33 HOH HOH . 
R 8 HOH C 27 527 51 HOH HOH . 
R 8 HOH C 28 528 141 HOH HOH . 
R 8 HOH C 29 529 116 HOH HOH . 
R 8 HOH C 30 530 35 HOH HOH . 
R 8 HOH C 31 531 77 HOH HOH . 
R 8 HOH C 32 532 7 HOH HOH . 
R 8 HOH C 33 533 113 HOH HOH . 
R 8 HOH C 34 534 112 HOH HOH . 
R 8 HOH C 35 535 118 HOH HOH . 
S 8 HOH D 1 501 140 HOH HOH . 
S 8 HOH D 2 502 29 HOH HOH . 
S 8 HOH D 3 503 83 HOH HOH . 
S 8 HOH D 4 504 38 HOH HOH . 
S 8 HOH D 5 505 34 HOH HOH . 
S 8 HOH D 6 506 138 HOH HOH . 
S 8 HOH D 7 507 22 HOH HOH . 
S 8 HOH D 8 508 8 HOH HOH . 
S 8 HOH D 9 509 53 HOH HOH . 
S 8 HOH D 10 510 139 HOH HOH . 
S 8 HOH D 11 511 75 HOH HOH . 
S 8 HOH D 12 512 6 HOH HOH . 
S 8 HOH D 13 513 71 HOH HOH . 
S 8 HOH D 14 514 47 HOH HOH . 
S 8 HOH D 15 515 18 HOH HOH . 
S 8 HOH D 16 516 27 HOH HOH . 
S 8 HOH D 17 517 60 HOH HOH . 
S 8 HOH D 18 518 46 HOH HOH . 
S 8 HOH D 19 519 16 HOH HOH . 
T 8 HOH A 1 501 43 HOH HOH . 
T 8 HOH A 2 502 54 HOH HOH . 
T 8 HOH A 3 503 45 HOH HOH . 
T 8 HOH A 4 504 125 HOH HOH . 
T 8 HOH A 5 505 124 HOH HOH . 
T 8 HOH A 6 506 17 HOH HOH . 
T 8 HOH A 7 507 127 HOH HOH . 
T 8 HOH A 8 508 70 HOH HOH . 
T 8 HOH A 9 509 13 HOH HOH . 
T 8 HOH A 10 510 121 HOH HOH . 
T 8 HOH A 11 511 79 HOH HOH . 
T 8 HOH A 12 512 119 HOH HOH . 
T 8 HOH A 13 513 37 HOH HOH . 
T 8 HOH A 14 514 123 HOH HOH . 
T 8 HOH A 15 515 84 HOH HOH . 
T 8 HOH A 16 516 41 HOH HOH . 
T 8 HOH A 17 517 11 HOH HOH . 
T 8 HOH A 18 518 26 HOH HOH . 
T 8 HOH A 19 519 114 HOH HOH . 
T 8 HOH A 20 520 21 HOH HOH . 
T 8 HOH A 21 521 69 HOH HOH . 
T 8 HOH A 22 522 105 HOH HOH . 
T 8 HOH A 23 523 122 HOH HOH . 
T 8 HOH A 24 524 19 HOH HOH . 
T 8 HOH A 25 525 126 HOH HOH . 
T 8 HOH A 26 526 25 HOH HOH . 
T 8 HOH A 27 527 50 HOH HOH . 
T 8 HOH A 28 528 72 HOH HOH . 
T 8 HOH A 29 529 74 HOH HOH . 
T 8 HOH A 30 530 65 HOH HOH . 
T 8 HOH A 31 531 57 HOH HOH . 
T 8 HOH A 32 532 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DHB . . . O 4 -0.115 27.088 9.297 1 79.31 ? C1 DHB 402 A 1 
HETATM 2 C C2 DHB . . . O 4 -1.469 27.433 9.282 1 73.88 ? C2 DHB 402 A 1 
HETATM 3 C C3 DHB . . . O 4 -1.967 28.323 10.214 1 69.2 ? C3 DHB 402 A 1 
HETATM 4 O O3 DHB . . . O 4 -3.297 28.645 10.156 1 77.45 ? O3 DHB 402 A 1 
HETATM 5 C C4 DHB . . . O 4 -1.123 28.867 11.188 1 65.34 ? C4 DHB 402 A 1 
HETATM 6 O O4 DHB . . . O 4 -1.599 29.745 12.133 1 63.78 ? O4 DHB 402 A 1 
HETATM 7 C C5 DHB . . . O 4 0.214 28.533 11.197 1 72.05 ? C5 DHB 402 A 1 
HETATM 8 C C6 DHB . . . O 4 0.712 27.632 10.267 1 78.15 ? C6 DHB 402 A 1 
HETATM 9 C C DHB . . . O 4 0.423 26.092 8.306 1 82.42 ? C DHB 402 A 1 
HETATM 10 O O1 DHB . . . O 4 1.659 25.951 8.239 1 79.63 ? O1 DHB 402 A 1 
HETATM 11 O O2 DHB . . . O 4 -0.394 25.394 7.671 1 85.12 ? O2 DHB 402 A 1 
HETATM 12 H H2 DHB . . . O 4 -2.045 27.064 8.636 1 73.43 ? H2 DHB 402 A 1 
HETATM 13 H HO3 DHB . . . O 4 -3.65 29.147 10.73 0 77.9 ? HO3 DHB 402 A 1 
HETATM 14 H HO4 DHB . . . O 4 -1.067 30.037 12.733 0 62.84 ? HO4 DHB 402 A 1 
HETATM 15 H H5 DHB . . . O 4 0.779 28.889 11.849 1 70.9 ? H5 DHB 402 A 1 
HETATM 16 H H6 DHB . . . O 4 1.623 27.398 10.293 1 77.2 ? H6 DHB 402 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    168 
_model_server_stats.query_time_ms           727 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           16 
#