data_8ZJW # _model_server_result.job_id tcnyb7WSOOSgfuADWAdS3g _model_server_result.datetime_utc '2025-03-03 12:00:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zjw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"EB","auth_seq_id":102}' # _entry.id 8ZJW # _exptl.entry_id 8ZJW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 596.925 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SPIRILLOXANTHIN _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZJW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZJW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 GA N N ? 4 JA N N ? 4 OA N N ? 4 RA N N ? 4 VA N N ? 4 AB N N ? 4 EB N N ? 4 HB N N ? 4 JB N N ? 4 OB N N ? 4 VB N N ? 4 ZB N N ? 4 AC N N ? 4 DC N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O MET 1 A MET 1 1_555 EA MG BCL . A BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc2 D O MET 1 E MET 1 1_555 IA MG BCL . E BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc3 F O MET 1 G MET 1 1_555 MA MG BCL . G BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc4 H O MET 1 J MET 1 1_555 QA MG BCL . J BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc5 J O MET 1 N MET 1 1_555 UA MG BCL . N BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc6 L O MET 1 R MET 1 1_555 YA MG BCL . R BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc7 N O MET 1 T MET 1 1_555 CB MG BCL . T BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc8 P O MET 1 V MET 1 1_555 GB MG BCL . V BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc9 S O MET 1 b MET 1 1_555 MB MG BCL . b BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc10 U O MET 1 d MET 1 1_555 QB MG BCL . d BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc11 W O MET 1 f MET 1 1_555 TB MG BCL . f BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc12 Y O MET 1 h MET 1 1_555 XB MG BCL . h BCL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc13 AA O MET 1 j MET 1 1_555 CC MG BCL . j BCL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc14 BA O MET 1 C MET 1 1_555 FC MG BCL . C BCL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? # _chem_comp.formula 'C42 H60 O2' _chem_comp.formula_weight 596.925 _chem_comp.id CRT _chem_comp.mon_nstd_flag . _chem_comp.name SPIRILLOXANTHIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RHODOVIOLASCIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1M O1 CRT sing 218 n n C1M H1M1 CRT sing 219 n n C1M H1M2 CRT sing 220 n n C1M H1M3 CRT sing 221 n n O1 C1 CRT sing 222 n n C1 C2 CRT sing 223 n n C1 C3 CRT sing 224 n n C1 C4 CRT sing 225 n n C2 H21A CRT sing 226 n n C2 H22A CRT sing 227 n n C2 H23 CRT sing 228 n n C3 H31A CRT sing 229 n n C3 H32A CRT sing 230 n n C3 H33 CRT sing 231 n n C4 C5 CRT sing 232 n n C4 H41 CRT sing 233 n n C4 H42 CRT sing 234 n n C5 C6 CRT doub 235 e n C5 H5 CRT sing 236 n n C6 C7 CRT sing 237 n n C6 H6 CRT sing 238 n n C7 C8 CRT sing 239 n n C7 C9 CRT doub 240 e n C8 H81 CRT sing 241 n n C8 H82 CRT sing 242 n n C8 H83 CRT sing 243 n n C9 C10 CRT sing 244 n n C9 H9 CRT sing 245 n n C10 C11 CRT doub 246 e n C10 H10 CRT sing 247 n n C11 C12 CRT sing 248 n n C11 H11 CRT sing 249 n n C12 C13 CRT sing 250 n n C12 C14 CRT doub 251 e n C13 H131 CRT sing 252 n n C13 H132 CRT sing 253 n n C13 H133 CRT sing 254 n n C14 C15 CRT sing 255 n n C14 H14 CRT sing 256 n n C15 C16 CRT doub 257 e n C15 H15 CRT sing 258 n n C16 C17 CRT sing 259 n n C16 H16 CRT sing 260 n n C17 C18 CRT sing 261 n n C17 C19 CRT doub 262 e n C18 H181 CRT sing 263 n n C18 H182 CRT sing 264 n n C18 H183 CRT sing 265 n n C19 C20 CRT sing 266 n n C19 H19 CRT sing 267 n n C20 C21 CRT doub 268 z n C20 H20 CRT sing 269 n n C21 C22 CRT sing 270 n n C21 H21 CRT sing 271 n n C22 C23 CRT doub 272 e n C22 H22 CRT sing 273 n n C23 C24 CRT sing 274 n n C23 C25 CRT sing 275 n n C24 H241 CRT sing 276 n n C24 H242 CRT sing 277 n n C24 H243 CRT sing 278 n n C25 C26 CRT doub 279 e n C25 H25 CRT sing 280 n n C26 C27 CRT sing 281 n n C26 H26 CRT sing 282 n n C27 C28 CRT doub 283 e n C27 H27 CRT sing 284 n n C28 C29 CRT sing 285 n n C28 C30 CRT sing 286 n n C29 H291 CRT sing 287 n n C29 H292 CRT sing 288 n n C29 H293 CRT sing 289 n n C30 C31 CRT doub 290 e n C30 H30 CRT sing 291 n n C31 C32 CRT sing 292 n n C31 H31 CRT sing 293 n n C32 C33 CRT doub 294 e n C32 H32 CRT sing 295 n n C33 C34 CRT sing 296 n n C33 C35 CRT sing 297 n n C34 H341 CRT sing 298 n n C34 H342 CRT sing 299 n n C34 H343 CRT sing 300 n n C35 C36 CRT doub 301 e n C35 H35 CRT sing 302 n n C36 C37 CRT sing 303 n n C36 H36 CRT sing 304 n n C37 C38 CRT sing 305 n n C37 H371 CRT sing 306 n n C37 H372 CRT sing 307 n n C38 C39 CRT sing 308 n n C38 C40 CRT sing 309 n n C38 O2 CRT sing 310 n n C39 H391 CRT sing 311 n n C39 H392 CRT sing 312 n n C39 H393 CRT sing 313 n n C40 H401 CRT sing 314 n n C40 H402 CRT sing 315 n n C40 H403 CRT sing 316 n n O2 C2M CRT sing 317 n n C2M H2M1 CRT sing 318 n n C2M H2M2 CRT sing 319 n n C2M H2M3 CRT sing 320 n n # _atom_sites.entry_id 8ZJW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 3 BCL B 1 101 101 BCL BCL . DA 3 BCL A 1 101 101 BCL BCL . EA 3 BCL A 1 102 102 BCL BCL . FA 3 BCL D 1 101 101 BCL BCL . GA 4 CRT D 1 102 102 CRT CRT . HA 3 BCL E 1 101 101 BCL BCL . IA 3 BCL E 1 102 102 BCL BCL . JA 4 CRT E 1 103 102 CRT CRT . KA 3 BCL F 1 101 101 BCL BCL . LA 3 BCL G 1 101 101 BCL BCL . MA 3 BCL G 1 102 102 BCL BCL . NA 3 BCL I 1 101 101 BCL BCL . OA 4 CRT I 1 102 102 CRT CRT . PA 3 BCL J 1 101 101 BCL BCL . QA 3 BCL J 1 102 102 BCL BCL . RA 4 CRT J 1 103 102 CRT CRT . SA 3 BCL K 1 101 101 BCL BCL . TA 3 BCL N 1 101 101 BCL BCL . UA 3 BCL N 1 102 102 BCL BCL . VA 4 CRT N 1 103 102 CRT CRT . WA 3 BCL Q 1 101 101 BCL BCL . XA 3 BCL R 1 101 101 BCL BCL . YA 3 BCL R 1 102 102 BCL BCL . ZA 3 BCL S 1 101 101 BCL BCL . AB 4 CRT S 1 102 102 CRT CRT . BB 3 BCL T 1 101 101 BCL BCL . CB 3 BCL T 1 102 102 BCL BCL . DB 3 BCL U 1 101 101 BCL BCL . EB 4 CRT U 1 102 102 CRT CRT . FB 3 BCL V 1 101 101 BCL BCL . GB 3 BCL V 1 102 102 BCL BCL . HB 4 CRT V 1 103 102 CRT CRT . IB 3 BCL Y 1 101 101 BCL BCL . JB 4 CRT Y 1 102 102 CRT CRT . KB 3 BCL a 1 101 101 BCL BCL . LB 3 BCL b 1 101 101 BCL BCL . MB 3 BCL b 1 102 102 BCL BCL . NB 3 BCL c 1 101 101 BCL BCL . OB 4 CRT c 1 102 102 CRT CRT . PB 3 BCL d 1 101 101 BCL BCL . QB 3 BCL d 1 102 102 BCL BCL . RB 3 BCL e 1 101 101 BCL BCL . SB 3 BCL f 1 101 101 BCL BCL . TB 3 BCL f 1 102 102 BCL BCL . UB 3 BCL g 1 101 101 BCL BCL . VB 4 CRT h 1 101 102 CRT CRT . WB 3 BCL h 1 102 101 BCL BCL . XB 3 BCL h 1 103 102 BCL BCL . YB 3 BCL i 1 101 101 BCL BCL . ZB 4 CRT i 1 102 102 CRT CRT . AC 4 CRT j 1 101 102 CRT CRT . BC 3 BCL j 1 102 101 BCL BCL . CC 3 BCL j 1 103 102 BCL BCL . DC 4 CRT C 1 101 102 CRT CRT . EC 3 BCL C 1 102 101 BCL BCL . FC 3 BCL C 1 103 102 BCL BCL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1M CRT . . . EB 4 148.722 210.787 209.259 1 8.12 ? C1M CRT 102 U 1 HETATM 2 O O1 CRT . . . EB 4 149.928 211.165 208.632 1 8.12 ? O1 CRT 102 U 1 HETATM 3 C C1 CRT . . . EB 4 150.725 212.18 209.268 1 8.12 ? C1 CRT 102 U 1 HETATM 4 C C2 CRT . . . EB 4 149.865 213.427 209.413 1 8.12 ? C2 CRT 102 U 1 HETATM 5 C C3 CRT . . . EB 4 151.178 211.649 210.62 1 8.12 ? C3 CRT 102 U 1 HETATM 6 C C4 CRT . . . EB 4 151.934 212.467 208.366 1 8.12 ? C4 CRT 102 U 1 HETATM 7 C C5 CRT . . . EB 4 152.807 211.291 208.053 1 8.12 ? C5 CRT 102 U 1 HETATM 8 C C6 CRT . . . EB 4 153.013 210.649 206.903 1 8.12 ? C6 CRT 102 U 1 HETATM 9 C C7 CRT . . . EB 4 152.682 210.886 205.546 1 8.12 ? C7 CRT 102 U 1 HETATM 10 C C8 CRT . . . EB 4 152.383 212.264 205.082 1 8.12 ? C8 CRT 102 U 1 HETATM 11 C C9 CRT . . . EB 4 152.596 209.844 204.611 1 8.12 ? C9 CRT 102 U 1 HETATM 12 C C10 CRT . . . EB 4 152.393 209.915 203.247 1 8.12 ? C10 CRT 102 U 1 HETATM 13 C C11 CRT . . . EB 4 152.088 208.845 202.434 1 8.12 ? C11 CRT 102 U 1 HETATM 14 C C12 CRT . . . EB 4 152.005 208.781 201.035 1 8.12 ? C12 CRT 102 U 1 HETATM 15 C C13 CRT . . . EB 4 152.462 209.944 200.235 1 8.12 ? C13 CRT 102 U 1 HETATM 16 C C14 CRT . . . EB 4 151.495 207.658 200.366 1 8.12 ? C14 CRT 102 U 1 HETATM 17 C C15 CRT . . . EB 4 151.403 207.403 199.014 1 8.12 ? C15 CRT 102 U 1 HETATM 18 C C16 CRT . . . EB 4 150.884 206.243 198.483 1 8.12 ? C16 CRT 102 U 1 HETATM 19 C C17 CRT . . . EB 4 150.8 205.831 197.146 1 8.12 ? C17 CRT 102 U 1 HETATM 20 C C18 CRT . . . EB 4 151.117 206.802 196.07 1 8.12 ? C18 CRT 102 U 1 HETATM 21 C C19 CRT . . . EB 4 150.452 204.521 196.794 1 8.12 ? C19 CRT 102 U 1 HETATM 22 C C20 CRT . . . EB 4 150.456 203.923 195.554 1 8.12 ? C20 CRT 102 U 1 HETATM 23 C C21 CRT . . . EB 4 150.357 202.575 195.264 1 8.12 ? C21 CRT 102 U 1 HETATM 24 C C22 CRT . . . EB 4 150.444 201.89 194.075 1 8.12 ? C22 CRT 102 U 1 HETATM 25 C C23 CRT . . . EB 4 150.544 200.506 193.876 1 8.12 ? C23 CRT 102 U 1 HETATM 26 C C24 CRT . . . EB 4 150.539 199.617 195.064 1 8.12 ? C24 CRT 102 U 1 HETATM 27 C C25 CRT . . . EB 4 150.654 199.93 192.604 1 8.12 ? C25 CRT 102 U 1 HETATM 28 C C26 CRT . . . EB 4 150.927 198.626 192.25 1 8.12 ? C26 CRT 102 U 1 HETATM 29 C C27 CRT . . . EB 4 151.077 198.219 190.944 1 8.12 ? C27 CRT 102 U 1 HETATM 30 C C28 CRT . . . EB 4 151.559 197.009 190.424 1 8.12 ? C28 CRT 102 U 1 HETATM 31 C C29 CRT . . . EB 4 151.84 195.881 191.348 1 8.12 ? C29 CRT 102 U 1 HETATM 32 C C30 CRT . . . EB 4 151.792 196.847 189.052 1 8.12 ? C30 CRT 102 U 1 HETATM 33 C C31 CRT . . . EB 4 152.418 195.832 188.363 1 8.12 ? C31 CRT 102 U 1 HETATM 34 C C32 CRT . . . EB 4 152.541 195.867 186.992 1 8.12 ? C32 CRT 102 U 1 HETATM 35 C C33 CRT . . . EB 4 153.174 194.984 186.11 1 8.12 ? C33 CRT 102 U 1 HETATM 36 C C34 CRT . . . EB 4 153.841 193.774 186.649 1 8.12 ? C34 CRT 102 U 1 HETATM 37 C C35 CRT . . . EB 4 153.2 195.221 184.728 1 8.12 ? C35 CRT 102 U 1 HETATM 38 C C36 CRT . . . EB 4 153.745 194.48 183.77 1 8.12 ? C36 CRT 102 U 1 HETATM 39 C C37 CRT . . . EB 4 153.78 194.884 182.333 1 8.12 ? C37 CRT 102 U 1 HETATM 40 C C38 CRT . . . EB 4 155.175 195.058 181.715 1 8.12 ? C38 CRT 102 U 1 HETATM 41 C C39 CRT . . . EB 4 155.039 195.434 180.247 1 8.12 ? C39 CRT 102 U 1 HETATM 42 C C40 CRT . . . EB 4 155.973 196.095 182.491 1 8.12 ? C40 CRT 102 U 1 HETATM 43 O O2 CRT . . . EB 4 155.888 193.811 181.833 1 8.12 ? O2 CRT 102 U 1 HETATM 44 C C2M CRT . . . EB 4 157.175 193.688 181.258 1 8.12 ? C2M CRT 102 U 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #