data_8ZMT # _model_server_result.job_id 09pNQndjcciQU--Zja8ayQ _model_server_result.datetime_utc '2024-12-26 01:04:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zmt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"HA","auth_seq_id":402}' # _entry.id 8ZMT # _exptl.entry_id 8ZMT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 592.891 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZMT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 16 AA N N ? 16 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 F SG CYS 29 F CYS 101 1_555 F SG CYS 51 F CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 O SG CYS 29 Q CYS 101 1_555 O SG CYS 51 Q CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 C NE2 HIS 82 C HIS 82 1_555 X FE HEM . C HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc2 C NE2 HIS 96 C HIS 96 1_555 Y FE HEM . C HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 X FE HEM . C HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 Y FE HEM . C HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc5 D NE2 HIS 44 D HIS 105 1_555 BA FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc6 L NE2 HIS 82 N HIS 82 1_555 KA FE HEM . N HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc7 L NE2 HIS 96 N HIS 96 1_555 NA FE HEM . N HEM 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc8 L NE2 HIS 183 N HIS 183 1_555 KA FE HEM . N HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc9 L NE2 HIS 197 N HIS 197 1_555 NA FE HEM . N HEM 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc10 M NE2 HIS 44 O HIS 105 1_555 OA FE HEM . O HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? # _chem_comp.formula 'C39 H60 O4' _chem_comp.formula_weight 592.891 _chem_comp.id UQ6 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1M UQ6 sing 1023 n n C1 C2 UQ6 doub 1024 n y C1 C6 UQ6 sing 1025 n y C1M H1M1 UQ6 sing 1026 n n C1M H1M2 UQ6 sing 1027 n n C1M H1M3 UQ6 sing 1028 n n C2 O2 UQ6 sing 1029 n n C2 C3 UQ6 sing 1030 n y O2 HO2 UQ6 sing 1031 n n C3 C4 UQ6 doub 1032 n y C3 O3 UQ6 sing 1033 n n C4 C5 UQ6 sing 1034 n y C4 O4 UQ6 sing 1035 n n C5 O5 UQ6 sing 1036 n n C5 C6 UQ6 doub 1037 n y O5 HO5 UQ6 sing 1038 n n C6 C7 UQ6 sing 1039 n n O3 C3M UQ6 sing 1040 n n C3M H3M1 UQ6 sing 1041 n n C3M H3M2 UQ6 sing 1042 n n C3M H3M3 UQ6 sing 1043 n n O4 C4M UQ6 sing 1044 n n C4M H4M1 UQ6 sing 1045 n n C4M H4M2 UQ6 sing 1046 n n C4M H4M3 UQ6 sing 1047 n n C7 C8 UQ6 sing 1048 n n C7 H71 UQ6 sing 1049 n n C7 H72 UQ6 sing 1050 n n C8 C9 UQ6 doub 1051 e n C8 H8 UQ6 sing 1052 n n C9 C10 UQ6 sing 1053 n n C9 C11 UQ6 sing 1054 n n C10 H101 UQ6 sing 1055 n n C10 H102 UQ6 sing 1056 n n C10 H103 UQ6 sing 1057 n n C11 C12 UQ6 sing 1058 n n C11 H111 UQ6 sing 1059 n n C11 H112 UQ6 sing 1060 n n C12 C13 UQ6 sing 1061 n n C12 H121 UQ6 sing 1062 n n C12 H122 UQ6 sing 1063 n n C13 C14 UQ6 doub 1064 e n C13 H13 UQ6 sing 1065 n n C14 C15 UQ6 sing 1066 n n C14 C16 UQ6 sing 1067 n n C15 H151 UQ6 sing 1068 n n C15 H152 UQ6 sing 1069 n n C15 H153 UQ6 sing 1070 n n C16 C17 UQ6 sing 1071 n n C16 H161 UQ6 sing 1072 n n C16 H162 UQ6 sing 1073 n n C17 C18 UQ6 sing 1074 n n C17 H171 UQ6 sing 1075 n n C17 H172 UQ6 sing 1076 n n C18 C19 UQ6 doub 1077 z n C18 H18 UQ6 sing 1078 n n C19 C20 UQ6 sing 1079 n n C19 C21 UQ6 sing 1080 n n C20 H201 UQ6 sing 1081 n n C20 H202 UQ6 sing 1082 n n C20 H203 UQ6 sing 1083 n n C21 C22 UQ6 sing 1084 n n C21 H211 UQ6 sing 1085 n n C21 H212 UQ6 sing 1086 n n C22 C23 UQ6 sing 1087 n n C22 H221 UQ6 sing 1088 n n C22 H222 UQ6 sing 1089 n n C23 C24 UQ6 doub 1090 e n C23 H23 UQ6 sing 1091 n n C24 C25 UQ6 sing 1092 n n C24 C26 UQ6 sing 1093 n n C25 H251 UQ6 sing 1094 n n C25 H252 UQ6 sing 1095 n n C25 H253 UQ6 sing 1096 n n C26 C27 UQ6 sing 1097 n n C26 H261 UQ6 sing 1098 n n C26 H262 UQ6 sing 1099 n n C27 C28 UQ6 sing 1100 n n C27 H271 UQ6 sing 1101 n n C27 H272 UQ6 sing 1102 n n C28 C29 UQ6 doub 1103 e n C28 H28 UQ6 sing 1104 n n C29 C30 UQ6 sing 1105 n n C29 C31 UQ6 sing 1106 n n C30 H301 UQ6 sing 1107 n n C30 H302 UQ6 sing 1108 n n C30 H303 UQ6 sing 1109 n n C31 C32 UQ6 sing 1110 n n C31 H311 UQ6 sing 1111 n n C31 H312 UQ6 sing 1112 n n C32 C33 UQ6 sing 1113 n n C32 H321 UQ6 sing 1114 n n C32 H322 UQ6 sing 1115 n n C33 C34 UQ6 doub 1116 n n C33 H33 UQ6 sing 1117 n n C34 C35 UQ6 sing 1118 n n C34 C36 UQ6 sing 1119 n n C35 H351 UQ6 sing 1120 n n C35 H352 UQ6 sing 1121 n n C35 H353 UQ6 sing 1122 n n C36 H361 UQ6 sing 1123 n n C36 H362 UQ6 sing 1124 n n C36 H363 UQ6 sing 1125 n n # _atom_sites.entry_id 8ZMT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 A1D6P C 1 401 401 A1D6P LIG . V 12 CN3 C 1 402 406 CN3 CN3 . W 13 9PE C 1 403 407 9PE 9PE . X 14 HEM C 1 404 807 HEM HEM . Y 14 HEM C 1 405 812 HEM HEM . Z 15 8PE C 1 406 813 8PE 8PE . AA 16 UQ6 C 1 407 816 UQ6 UQ6 . BA 14 HEM D 1 401 809 HEM HEM . CA 17 6PH D 1 402 810 6PH 6PH . DA 18 FES E 1 301 302 FES FES . EA 17 6PH E 1 302 401 6PH 6PH . FA 17 6PH L 1 501 403 6PH 6PH . GA 11 A1D6P N 1 401 402 A1D6P LIG . HA 16 UQ6 N 1 402 403 UQ6 UQ6 . IA 15 8PE N 1 403 404 8PE 8PE . JA 13 9PE N 1 404 405 9PE 9PE . KA 14 HEM N 1 405 808 HEM HEM . LA 19 CN5 N 1 406 814 CN5 CN5 . MA 12 CN3 N 1 407 815 CN3 CN3 . NA 14 HEM N 1 408 1633 HEM HEM . OA 14 HEM O 1 401 1215 HEM HEM . PA 18 FES P 1 301 301 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UQ6 . . . HA 16 153.151 138.056 157.959 1 56.62 ? C1 UQ6 402 N 1 HETATM 2 C C1M UQ6 . . . HA 16 152.412 137.223 159.013 1 56.62 ? C1M UQ6 402 N 1 HETATM 3 C C2 UQ6 . . . HA 16 153.861 137.405 156.962 1 56.62 ? C2 UQ6 402 N 1 HETATM 4 O O2 UQ6 . . . HA 16 153.89 136.009 156.943 1 56.62 ? O2 UQ6 402 N 1 HETATM 5 C C3 UQ6 . . . HA 16 154.556 138.111 155.988 1 56.62 ? C3 UQ6 402 N 1 HETATM 6 C C4 UQ6 . . . HA 16 154.499 139.515 156.009 1 56.62 ? C4 UQ6 402 N 1 HETATM 7 C C5 UQ6 . . . HA 16 153.785 140.164 157.028 1 56.62 ? C5 UQ6 402 N 1 HETATM 8 O O5 UQ6 . . . HA 16 153.752 141.564 157.053 1 56.62 ? O5 UQ6 402 N 1 HETATM 9 C C6 UQ6 . . . HA 16 153.114 139.444 158.007 1 56.62 ? C6 UQ6 402 N 1 HETATM 10 O O3 UQ6 . . . HA 16 155.211 137.285 155.018 1 56.62 ? O3 UQ6 402 N 1 HETATM 11 C C3M UQ6 . . . HA 16 156.53 137.481 154.546 1 56.62 ? C3M UQ6 402 N 1 HETATM 12 O O4 UQ6 . . . HA 16 155.166 140.348 155.081 1 56.62 ? O4 UQ6 402 N 1 HETATM 13 C C4M UQ6 . . . HA 16 154.599 140.517 153.809 1 56.62 ? C4M UQ6 402 N 1 HETATM 14 C C7 UQ6 . . . HA 16 152.299 140.142 159.134 1 56.62 ? C7 UQ6 402 N 1 HETATM 15 C C8 UQ6 . . . HA 16 153.112 140.992 160.132 1 56.62 ? C8 UQ6 402 N 1 HETATM 16 C C9 UQ6 . . . HA 16 153.18 140.682 161.445 1 56.62 ? C9 UQ6 402 N 1 HETATM 17 C C10 UQ6 . . . HA 16 152.461 139.449 162.005 1 56.62 ? C10 UQ6 402 N 1 HETATM 18 C C11 UQ6 . . . HA 16 153.987 141.578 162.421 1 56.62 ? C11 UQ6 402 N 1 HETATM 19 C C12 UQ6 . . . HA 16 153.069 142.783 162.852 1 56.62 ? C12 UQ6 402 N 1 HETATM 20 C C13 UQ6 . . . HA 16 153.068 142.962 164.406 1 56.62 ? C13 UQ6 402 N 1 HETATM 21 C C14 UQ6 . . . HA 16 153.105 144.213 164.984 1 56.62 ? C14 UQ6 402 N 1 HETATM 22 C C15 UQ6 . . . HA 16 153.152 145.479 164.115 1 56.62 ? C15 UQ6 402 N 1 HETATM 23 C C16 UQ6 . . . HA 16 153.104 144.346 166.53 1 56.62 ? C16 UQ6 402 N 1 HETATM 24 C C17 UQ6 . . . HA 16 152.398 145.684 166.977 1 56.62 ? C17 UQ6 402 N 1 HETATM 25 C C18 UQ6 . . . HA 16 151.659 145.441 168.311 1 56.62 ? C18 UQ6 402 N 1 HETATM 26 C C19 UQ6 . . . HA 16 150.676 146.274 168.74 1 56.62 ? C19 UQ6 402 N 1 HETATM 27 C C20 UQ6 . . . HA 16 150.275 147.489 167.905 1 56.62 ? C20 UQ6 402 N 1 HETATM 28 C C21 UQ6 . . . HA 16 149.967 145.97 170.09 1 56.62 ? C21 UQ6 402 N 1 HETATM 29 C C22 UQ6 . . . HA 16 148.833 147.023 170.419 1 56.62 ? C22 UQ6 402 N 1 HETATM 30 C C23 UQ6 . . . HA 16 148.079 146.539 171.672 1 56.62 ? C23 UQ6 402 N 1 HETATM 31 C C24 UQ6 . . . HA 16 147.333 147.374 172.444 1 56.62 ? C24 UQ6 402 N 1 HETATM 32 C C25 UQ6 . . . HA 16 147.207 148.858 172.101 1 56.62 ? C25 UQ6 402 N 1 HETATM 33 C C26 UQ6 . . . HA 16 146.611 146.79 173.697 1 56.62 ? C26 UQ6 402 N 1 HETATM 34 C C27 UQ6 . . . HA 16 145.251 147.491 173.951 1 56.62 ? C27 UQ6 402 N 1 HETATM 35 C C28 UQ6 . . . HA 16 144.842 147.234 175.429 1 56.62 ? C28 UQ6 402 N 1 HETATM 36 C C29 UQ6 . . . HA 16 143.893 147.96 176.031 1 56.62 ? C29 UQ6 402 N 1 HETATM 37 C C30 UQ6 . . . HA 16 143.174 149.088 175.261 1 56.62 ? C30 UQ6 402 N 1 HETATM 38 C C31 UQ6 . . . HA 16 143.546 147.649 177.496 1 56.62 ? C31 UQ6 402 N 1 HETATM 39 C C32 UQ6 . . . HA 16 142.516 148.643 178.076 1 56.62 ? C32 UQ6 402 N 1 HETATM 40 C C33 UQ6 . . . HA 16 141.112 147.989 178.008 1 56.62 ? C33 UQ6 402 N 1 HETATM 41 C C34 UQ6 . . . HA 16 140.042 148.544 178.587 1 56.62 ? C34 UQ6 402 N 1 HETATM 42 C C35 UQ6 . . . HA 16 138.675 147.829 178.47 1 56.62 ? C35 UQ6 402 N 1 HETATM 43 C C36 UQ6 . . . HA 16 140.15 149.867 179.358 1 56.62 ? C36 UQ6 402 N 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 72 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 43 #