data_8ZOS # _model_server_result.job_id 30tjvQeuax-iEK7VZRsmlA _model_server_result.datetime_utc '2024-12-26 12:15:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":401}' # _entry.id 8ZOS # _exptl.entry_id 8ZOS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZOS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 AA N N ? 15 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 82 A HIS 83 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc2 A NE2 HIS 96 A HIS 97 1_555 X FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc3 A NE2 HIS 181 A HIS 182 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc4 A NE2 HIS 195 A HIS 196 1_555 X FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc5 L NE2 HIS 82 a HIS 83 1_555 DA FE HEM . a HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc6 L NE2 HIS 96 a HIS 97 1_555 EA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc7 L NE2 HIS 181 a HIS 182 1_555 DA FE HEM . a HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc8 L NE2 HIS 195 a HIS 196 1_555 EA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 435 n n FE NB HEC sing 436 n n FE NC HEC sing 437 n n FE ND HEC sing 438 n n CHA C1A HEC doub 439 n n CHA C4D HEC sing 440 n n CHA HHA HEC sing 441 n n CHB C4A HEC doub 442 n n CHB C1B HEC sing 443 n n CHB HHB HEC sing 444 n n CHC C4B HEC doub 445 n n CHC C1C HEC sing 446 n n CHC HHC HEC sing 447 n n CHD C4C HEC doub 448 n n CHD C1D HEC sing 449 n n CHD HHD HEC sing 450 n n NA C1A HEC sing 451 n y NA C4A HEC sing 452 n y C1A C2A HEC sing 453 n y C2A C3A HEC doub 454 n y C2A CAA HEC sing 455 n n C3A C4A HEC sing 456 n y C3A CMA HEC sing 457 n n CMA HMA1 HEC sing 458 n n CMA HMA2 HEC sing 459 n n CMA HMA3 HEC sing 460 n n CAA CBA HEC sing 461 n n CAA HAA1 HEC sing 462 n n CAA HAA2 HEC sing 463 n n CBA CGA HEC sing 464 n n CBA HBA1 HEC sing 465 n n CBA HBA2 HEC sing 466 n n CGA O1A HEC doub 467 n n CGA O2A HEC sing 468 n n O2A H2A HEC sing 469 n n NB C1B HEC sing 470 n y NB C4B HEC sing 471 n y C1B C2B HEC doub 472 n y C2B C3B HEC sing 473 n y C2B CMB HEC sing 474 n n C3B C4B HEC sing 475 n y C3B CAB HEC doub 476 e n CMB HMB1 HEC sing 477 n n CMB HMB2 HEC sing 478 n n CMB HMB3 HEC sing 479 n n CAB CBB HEC sing 480 n n CAB HAB HEC sing 481 n n CBB HBB1 HEC sing 482 n n CBB HBB2 HEC sing 483 n n CBB HBB3 HEC sing 484 n n NC C1C HEC sing 485 n y NC C4C HEC sing 486 n y C1C C2C HEC doub 487 n y C2C C3C HEC sing 488 n y C2C CMC HEC sing 489 n n C3C C4C HEC sing 490 n y C3C CAC HEC doub 491 e n CMC HMC1 HEC sing 492 n n CMC HMC2 HEC sing 493 n n CMC HMC3 HEC sing 494 n n CAC CBC HEC sing 495 n n CAC HAC HEC sing 496 n n CBC HBC1 HEC sing 497 n n CBC HBC2 HEC sing 498 n n CBC HBC3 HEC sing 499 n n ND C1D HEC sing 500 n y ND C4D HEC sing 501 n y C1D C2D HEC doub 502 n y C2D C3D HEC sing 503 n y C2D CMD HEC sing 504 n n C3D C4D HEC doub 505 n y C3D CAD HEC sing 506 n n CMD HMD1 HEC sing 507 n n CMD HMD2 HEC sing 508 n n CMD HMD3 HEC sing 509 n n CAD CBD HEC sing 510 n n CAD HAD1 HEC sing 511 n n CAD HAD2 HEC sing 512 n n CBD CGD HEC sing 513 n n CBD HBD1 HEC sing 514 n n CBD HBD2 HEC sing 515 n n CGD O1D HEC doub 516 n n CGD O2D HEC sing 517 n n O2D H2D HEC sing 518 n n # _atom_sites.entry_id 8ZOS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code W 12 A1D6K A 1 401 401 A1D6K LIG . X 13 HEM A 1 402 404 HEM HEM . Y 13 HEM A 1 403 405 HEM HEM . Z 14 PEE A 1 404 497 PEE PEE . AA 15 HEC B 1 401 406 HEC HEC . BA 14 PEE D 1 501 503 PEE PEE . CA 12 A1D6K a 1 401 401 A1D6K LIG . DA 13 HEM a 1 402 401 HEM HEM . EA 13 HEM a 1 403 402 HEM HEM . FA 16 FES a 1 404 302 FES FES . GA 14 PEE a 1 405 498 PEE PEE . HA 17 CDL a 1 406 501 CDL CDL . IA 17 CDL a 1 407 504 CDL CDL . JA 15 HEC b 1 401 403 HEC HEC . KA 16 FES c 1 301 303 FES FES . LA 17 CDL g 1 201 499 CDL CDL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . JA 15 128.604 134.648 215.254 1 66.27 ? FE HEC 401 b 1 HETATM 2 C CHA HEC . . . JA 15 130.343 132.59 213.126 1 66.27 ? CHA HEC 401 b 1 HETATM 3 C CHB HEC . . . JA 15 127.222 136.244 212.532 1 66.27 ? CHB HEC 401 b 1 HETATM 4 C CHC HEC . . . JA 15 127.045 136.909 217.328 1 66.27 ? CHC HEC 401 b 1 HETATM 5 C CHD HEC . . . JA 15 130.002 133.111 217.978 1 66.27 ? CHD HEC 401 b 1 HETATM 6 N NA HEC . . . JA 15 128.781 134.477 213.21 1 66.27 ? NA HEC 401 b 1 HETATM 7 C C1A HEC . . . JA 15 129.502 133.509 212.541 1 66.27 ? C1A HEC 401 b 1 HETATM 8 C C2A HEC . . . JA 15 129.216 133.636 211.127 1 66.27 ? C2A HEC 401 b 1 HETATM 9 C C3A HEC . . . JA 15 128.355 134.641 210.967 1 66.27 ? C3A HEC 401 b 1 HETATM 10 C C4A HEC . . . JA 15 128.064 135.19 212.271 1 66.27 ? C4A HEC 401 b 1 HETATM 11 C CMA HEC . . . JA 15 127.763 135.145 209.634 1 66.27 ? CMA HEC 401 b 1 HETATM 12 C CAA HEC . . . JA 15 129.805 132.758 210.006 1 66.27 ? CAA HEC 401 b 1 HETATM 13 C CBA HEC . . . JA 15 128.926 131.525 209.854 1 66.27 ? CBA HEC 401 b 1 HETATM 14 C CGA HEC . . . JA 15 129.522 130.627 208.811 1 66.27 ? CGA HEC 401 b 1 HETATM 15 O O1A HEC . . . JA 15 130.762 130.673 208.627 1 66.27 ? O1A HEC 401 b 1 HETATM 16 O O2A HEC . . . JA 15 128.761 129.859 208.172 1 66.27 ? O2A HEC 401 b 1 HETATM 17 N NB HEC . . . JA 15 127.38 136.279 214.993 1 66.27 ? NB HEC 401 b 1 HETATM 18 C C1B HEC . . . JA 15 126.915 136.745 213.777 1 66.27 ? C1B HEC 401 b 1 HETATM 19 C C2B HEC . . . JA 15 126.04 137.868 214.019 1 66.27 ? C2B HEC 401 b 1 HETATM 20 C C3B HEC . . . JA 15 125.984 138.073 215.343 1 66.27 ? C3B HEC 401 b 1 HETATM 21 C C4B HEC . . . JA 15 126.824 137.067 215.979 1 66.27 ? C4B HEC 401 b 1 HETATM 22 C CMB HEC . . . JA 15 125.336 138.665 212.896 1 66.27 ? CMB HEC 401 b 1 HETATM 23 C CAB HEC . . . JA 15 125.167 139.166 216.076 1 66.27 ? CAB HEC 401 b 1 HETATM 24 C CBB HEC . . . JA 15 123.66 138.829 216.146 1 66.27 ? CBB HEC 401 b 1 HETATM 25 N NC HEC . . . JA 15 128.526 134.946 217.261 1 66.27 ? NC HEC 401 b 1 HETATM 26 C C1C HEC . . . JA 15 127.823 135.937 217.921 1 66.27 ? C1C HEC 401 b 1 HETATM 27 C C2C HEC . . . JA 15 127.903 135.662 219.343 1 66.27 ? C2C HEC 401 b 1 HETATM 28 C C3C HEC . . . JA 15 128.867 134.749 219.506 1 66.27 ? C3C HEC 401 b 1 HETATM 29 C C4C HEC . . . JA 15 129.182 134.19 218.211 1 66.27 ? C4C HEC 401 b 1 HETATM 30 C CMC HEC . . . JA 15 127.474 136.665 220.435 1 66.27 ? CMC HEC 401 b 1 HETATM 31 C CAC HEC . . . JA 15 129.389 134.191 220.847 1 66.27 ? CAC HEC 401 b 1 HETATM 32 C CBC HEC . . . JA 15 128.346 133.196 221.405 1 66.27 ? CBC HEC 401 b 1 HETATM 33 N ND HEC . . . JA 15 129.903 133.005 215.523 1 66.27 ? ND HEC 401 b 1 HETATM 34 C C1D HEC . . . JA 15 130.504 132.739 216.75 1 66.27 ? C1D HEC 401 b 1 HETATM 35 C C2D HEC . . . JA 15 131.735 132.014 216.518 1 66.27 ? C2D HEC 401 b 1 HETATM 36 C C3D HEC . . . JA 15 131.836 131.862 214.998 1 66.27 ? C3D HEC 401 b 1 HETATM 37 C C4D HEC . . . JA 15 130.656 132.5 214.465 1 66.27 ? C4D HEC 401 b 1 HETATM 38 C CMD HEC . . . JA 15 132.752 131.498 217.559 1 66.27 ? CMD HEC 401 b 1 HETATM 39 C CAD HEC . . . JA 15 132.953 131.158 214.205 1 66.27 ? CAD HEC 401 b 1 HETATM 40 C CBD HEC . . . JA 15 132.699 129.659 214.253 1 66.27 ? CBD HEC 401 b 1 HETATM 41 C CGD HEC . . . JA 15 133.738 128.951 213.431 1 66.27 ? CGD HEC 401 b 1 HETATM 42 O O1D HEC . . . JA 15 133.835 127.703 213.538 1 66.27 ? O1D HEC 401 b 1 HETATM 43 O O2D HEC . . . JA 15 134.474 129.636 212.674 1 66.27 ? O2D HEC 401 b 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 201 _model_server_stats.query_time_ms 485 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 43 #