data_8ZOS
#
_model_server_result.job_id            SGHk_QP7XbT7er7an6rb4g 
_model_server_result.datetime_utc      '2024-12-26 12:05:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8zos 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":403}' 
#
_entry.id    8ZOS 
#
_exptl.entry_id    8ZOS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          13 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ZOS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZOS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    22-meric 
_pdbx_struct_assembly.oligomeric_count      22 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 13 X N N 
? 13 Y N N 
? 13 DA N N 
? 13 EA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 82 A HIS 83 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? 
metalc ? metalc2 A NE2 HIS 96 A HIS 97 1_555 X FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc3 A NE2 HIS 181 A HIS 182 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc4 A NE2 HIS 195 A HIS 196 1_555 X FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? 
metalc ? metalc5 L NE2 HIS 82 a HIS 83 1_555 DA FE HEM . a HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? 
metalc ? metalc6 L NE2 HIS 96 a HIS 97 1_555 EA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc7 L NE2 HIS 181 a HIS 182 1_555 DA FE HEM . a HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? 
metalc ? metalc8 L NE2 HIS 195 a HIS 196 1_555 EA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 519 n n 
CHA C4D HEM doub 520 n n 
CHA HHA HEM sing 521 n n 
CHB C4A HEM sing 522 n n 
CHB C1B HEM doub 523 n n 
CHB HHB HEM sing 524 n n 
CHC C4B HEM sing 525 n n 
CHC C1C HEM doub 526 n n 
CHC HHC HEM sing 527 n n 
CHD C4C HEM doub 528 n n 
CHD C1D HEM sing 529 n n 
CHD HHD HEM sing 530 n n 
C1A C2A HEM doub 531 n y 
C1A NA HEM sing 532 n y 
C2A C3A HEM sing 533 n y 
C2A CAA HEM sing 534 n n 
C3A C4A HEM doub 535 n y 
C3A CMA HEM sing 536 n n 
C4A NA HEM sing 537 n y 
CMA HMA HEM sing 538 n n 
CMA HMAA HEM sing 539 n n 
CMA HMAB HEM sing 540 n n 
CAA CBA HEM sing 541 n n 
CAA HAA HEM sing 542 n n 
CAA HAAA HEM sing 543 n n 
CBA CGA HEM sing 544 n n 
CBA HBA HEM sing 545 n n 
CBA HBAA HEM sing 546 n n 
CGA O1A HEM doub 547 n n 
CGA O2A HEM sing 548 n n 
C1B C2B HEM sing 549 n n 
C1B NB HEM sing 550 n n 
C2B C3B HEM doub 551 n n 
C2B CMB HEM sing 552 n n 
C3B C4B HEM sing 553 n n 
C3B CAB HEM sing 554 n n 
C4B NB HEM doub 555 n n 
CMB HMB HEM sing 556 n n 
CMB HMBA HEM sing 557 n n 
CMB HMBB HEM sing 558 n n 
CAB CBB HEM doub 559 n n 
CAB HAB HEM sing 560 n n 
CBB HBB HEM sing 561 n n 
CBB HBBA HEM sing 562 n n 
C1C C2C HEM sing 563 n y 
C1C NC HEM sing 564 n y 
C2C C3C HEM doub 565 n y 
C2C CMC HEM sing 566 n n 
C3C C4C HEM sing 567 n y 
C3C CAC HEM sing 568 n n 
C4C NC HEM sing 569 n y 
CMC HMC HEM sing 570 n n 
CMC HMCA HEM sing 571 n n 
CMC HMCB HEM sing 572 n n 
CAC CBC HEM doub 573 n n 
CAC HAC HEM sing 574 n n 
CBC HBC HEM sing 575 n n 
CBC HBCA HEM sing 576 n n 
C1D C2D HEM sing 577 n n 
C1D ND HEM doub 578 n n 
C2D C3D HEM doub 579 n n 
C2D CMD HEM sing 580 n n 
C3D C4D HEM sing 581 n n 
C3D CAD HEM sing 582 n n 
C4D ND HEM sing 583 n n 
CMD HMD HEM sing 584 n n 
CMD HMDA HEM sing 585 n n 
CMD HMDB HEM sing 586 n n 
CAD CBD HEM sing 587 n n 
CAD HAD HEM sing 588 n n 
CAD HADA HEM sing 589 n n 
CBD CGD HEM sing 590 n n 
CBD HBD HEM sing 591 n n 
CBD HBDA HEM sing 592 n n 
CGD O1D HEM doub 593 n n 
CGD O2D HEM sing 594 n n 
O2A H2A HEM sing 595 n n 
O2D H2D HEM sing 596 n n 
FE NA HEM sing 597 n n 
FE NB HEM sing 598 n n 
FE NC HEM sing 599 n n 
FE ND HEM sing 600 n n 
#
_atom_sites.entry_id                     8ZOS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
W 12 A1D6K A 1 401 401 A1D6K LIG . 
X 13 HEM A 1 402 404 HEM HEM . 
Y 13 HEM A 1 403 405 HEM HEM . 
Z 14 PEE A 1 404 497 PEE PEE . 
AA 15 HEC B 1 401 406 HEC HEC . 
BA 14 PEE D 1 501 503 PEE PEE . 
CA 12 A1D6K a 1 401 401 A1D6K LIG . 
DA 13 HEM a 1 402 401 HEM HEM . 
EA 13 HEM a 1 403 402 HEM HEM . 
FA 16 FES a 1 404 302 FES FES . 
GA 14 PEE a 1 405 498 PEE PEE . 
HA 17 CDL a 1 406 501 CDL CDL . 
IA 17 CDL a 1 407 504 CDL CDL . 
JA 15 HEC b 1 401 403 HEC HEC . 
KA 16 FES c 1 301 303 FES FES . 
LA 17 CDL g 1 201 499 CDL CDL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . Y 13 162.079 160.041 187.065 1 28.36 ? CHA HEM 403 A 1 
HETATM 2 C CHB HEM . . . Y 13 162.421 162.431 182.858 1 28.36 ? CHB HEM 403 A 1 
HETATM 3 C CHC HEM . . . Y 13 160.291 158.559 180.947 1 28.36 ? CHC HEM 403 A 1 
HETATM 4 C CHD HEM . . . Y 13 158.269 157.732 185.278 1 28.36 ? CHD HEM 403 A 1 
HETATM 5 C C1A HEM . . . Y 13 162.37 161.033 186.149 1 28.36 ? C1A HEM 403 A 1 
HETATM 6 C C2A HEM . . . Y 13 162.983 162.324 186.402 1 28.36 ? C2A HEM 403 A 1 
HETATM 7 C C3A HEM . . . Y 13 163.075 162.979 185.239 1 28.36 ? C3A HEM 403 A 1 
HETATM 8 C C4A HEM . . . Y 13 162.522 162.139 184.201 1 28.36 ? C4A HEM 403 A 1 
HETATM 9 C CMA HEM . . . Y 13 163.669 164.385 185.038 1 28.36 ? CMA HEM 403 A 1 
HETATM 10 C CAA HEM . . . Y 13 163.465 162.87 187.763 1 28.36 ? CAA HEM 403 A 1 
HETATM 11 C CBA HEM . . . Y 13 164.665 162.09 188.292 1 28.36 ? CBA HEM 403 A 1 
HETATM 12 C CGA HEM . . . Y 13 165.255 162.809 189.472 1 28.36 ? CGA HEM 403 A 1 
HETATM 13 O O1A HEM . . . Y 13 165.953 162.15 190.278 1 28.36 ? O1A HEM 403 A 1 
HETATM 14 O O2A HEM . . . Y 13 165.019 164.034 189.607 1 28.36 ? O2A HEM 403 A 1 
HETATM 15 C C1B HEM . . . Y 13 161.907 161.567 181.916 1 28.36 ? C1B HEM 403 A 1 
HETATM 16 C C2B HEM . . . Y 13 161.877 161.742 180.478 1 28.36 ? C2B HEM 403 A 1 
HETATM 17 C C3B HEM . . . Y 13 161.297 160.645 179.942 1 28.36 ? C3B HEM 403 A 1 
HETATM 18 C C4B HEM . . . Y 13 160.926 159.775 181.037 1 28.36 ? C4B HEM 403 A 1 
HETATM 19 C CMB HEM . . . Y 13 162.478 162.988 179.787 1 28.36 ? CMB HEM 403 A 1 
HETATM 20 C CAB HEM . . . Y 13 160.965 160.252 178.473 1 28.36 ? CAB HEM 403 A 1 
HETATM 21 C CBB HEM . . . Y 13 160.716 161.094 177.465 1 28.36 ? CBB HEM 403 A 1 
HETATM 22 C C1C HEM . . . Y 13 159.534 157.985 181.955 1 28.36 ? C1C HEM 403 A 1 
HETATM 23 C C2C HEM . . . Y 13 158.708 156.804 181.834 1 28.36 ? C2C HEM 403 A 1 
HETATM 24 C C3C HEM . . . Y 13 158.128 156.577 183.036 1 28.36 ? C3C HEM 403 A 1 
HETATM 25 C C4C HEM . . . Y 13 158.595 157.605 183.943 1 28.36 ? C4C HEM 403 A 1 
HETATM 26 C CMC HEM . . . Y 13 158.573 156.045 180.493 1 28.36 ? CMC HEM 403 A 1 
HETATM 27 C CAC HEM . . . Y 13 157.156 155.463 183.527 1 28.36 ? CAC HEM 403 A 1 
HETATM 28 C CBC HEM . . . Y 13 156.938 154.27 182.958 1 28.36 ? CBC HEM 403 A 1 
HETATM 29 C C1D HEM . . . Y 13 159.149 158.221 186.229 1 28.36 ? C1D HEM 403 A 1 
HETATM 30 C C2D HEM . . . Y 13 159.11 158.076 187.668 1 28.36 ? C2D HEM 403 A 1 
HETATM 31 C C3D HEM . . . Y 13 160.157 158.71 188.214 1 28.36 ? C3D HEM 403 A 1 
HETATM 32 C C4D HEM . . . Y 13 160.923 159.29 187.103 1 28.36 ? C4D HEM 403 A 1 
HETATM 33 C CMD HEM . . . Y 13 158.03 157.314 188.467 1 28.36 ? CMD HEM 403 A 1 
HETATM 34 C CAD HEM . . . Y 13 160.354 158.701 189.768 1 28.36 ? CAD HEM 403 A 1 
HETATM 35 C CBD HEM . . . Y 13 161.44 159.567 190.409 1 28.36 ? CBD HEM 403 A 1 
HETATM 36 C CGD HEM . . . Y 13 162.749 158.822 190.425 1 28.36 ? CGD HEM 403 A 1 
HETATM 37 O O1D HEM . . . Y 13 163.819 159.475 190.375 1 28.36 ? O1D HEM 403 A 1 
HETATM 38 O O2D HEM . . . Y 13 162.725 157.57 190.475 1 28.36 ? O2D HEM 403 A 1 
HETATM 39 N NA HEM . . . Y 13 162.104 160.964 184.798 1 28.36 ? NA HEM 403 A 1 
HETATM 40 N NB HEM . . . Y 13 161.316 160.363 182.212 1 28.36 ? NB HEM 403 A 1 
HETATM 41 N NC HEM . . . Y 13 159.444 158.439 183.256 1 28.36 ? NC HEM 403 A 1 
HETATM 42 N ND HEM . . . Y 13 160.267 158.964 185.937 1 28.36 ? ND HEM 403 A 1 
HETATM 43 FE FE HEM . . . Y 13 160.8 159.646 184.076 1 28.36 ? FE HEM 403 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           363 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#