data_8ZOW # _model_server_result.job_id idfzQ7ZBWUWL-RNUE6NhQw _model_server_result.datetime_utc '2024-12-26 13:01:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":401}' # _entry.id 8ZOW # _exptl.entry_id 8ZOW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZOW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 16 CA N N ? 16 KA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 82 A HIS 83 1_555 Z FE HEM . A HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc2 A NE2 HIS 96 A HIS 97 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc3 A NE2 HIS 181 A HIS 182 1_555 Z FE HEM . A HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc4 A NE2 HIS 195 A HIS 196 1_555 Y FE HEM . A HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc5 B NE2 HIS 41 B HIS 126 1_555 CA FE HEC . B HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc6 L NE2 HIS 82 a HIS 83 1_555 GA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc7 L NE2 HIS 96 a HIS 97 1_555 HA FE HEM . a HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc8 L NE2 HIS 181 a HIS 182 1_555 GA FE HEM . a HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc9 L NE2 HIS 195 a HIS 196 1_555 HA FE HEM . a HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc10 M NE2 HIS 41 b HIS 126 1_555 KA FE HEC . b HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc11 N SG CYS 160 c CYS 238 1_555 LA FE1 FES . c FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 436 n n FE NB HEC sing 437 n n FE NC HEC sing 438 n n FE ND HEC sing 439 n n CHA C1A HEC doub 440 n n CHA C4D HEC sing 441 n n CHA HHA HEC sing 442 n n CHB C4A HEC doub 443 n n CHB C1B HEC sing 444 n n CHB HHB HEC sing 445 n n CHC C4B HEC doub 446 n n CHC C1C HEC sing 447 n n CHC HHC HEC sing 448 n n CHD C4C HEC doub 449 n n CHD C1D HEC sing 450 n n CHD HHD HEC sing 451 n n NA C1A HEC sing 452 n y NA C4A HEC sing 453 n y C1A C2A HEC sing 454 n y C2A C3A HEC doub 455 n y C2A CAA HEC sing 456 n n C3A C4A HEC sing 457 n y C3A CMA HEC sing 458 n n CMA HMA1 HEC sing 459 n n CMA HMA2 HEC sing 460 n n CMA HMA3 HEC sing 461 n n CAA CBA HEC sing 462 n n CAA HAA1 HEC sing 463 n n CAA HAA2 HEC sing 464 n n CBA CGA HEC sing 465 n n CBA HBA1 HEC sing 466 n n CBA HBA2 HEC sing 467 n n CGA O1A HEC doub 468 n n CGA O2A HEC sing 469 n n O2A H2A HEC sing 470 n n NB C1B HEC sing 471 n y NB C4B HEC sing 472 n y C1B C2B HEC doub 473 n y C2B C3B HEC sing 474 n y C2B CMB HEC sing 475 n n C3B C4B HEC sing 476 n y C3B CAB HEC doub 477 e n CMB HMB1 HEC sing 478 n n CMB HMB2 HEC sing 479 n n CMB HMB3 HEC sing 480 n n CAB CBB HEC sing 481 n n CAB HAB HEC sing 482 n n CBB HBB1 HEC sing 483 n n CBB HBB2 HEC sing 484 n n CBB HBB3 HEC sing 485 n n NC C1C HEC sing 486 n y NC C4C HEC sing 487 n y C1C C2C HEC doub 488 n y C2C C3C HEC sing 489 n y C2C CMC HEC sing 490 n n C3C C4C HEC sing 491 n y C3C CAC HEC doub 492 e n CMC HMC1 HEC sing 493 n n CMC HMC2 HEC sing 494 n n CMC HMC3 HEC sing 495 n n CAC CBC HEC sing 496 n n CAC HAC HEC sing 497 n n CBC HBC1 HEC sing 498 n n CBC HBC2 HEC sing 499 n n CBC HBC3 HEC sing 500 n n ND C1D HEC sing 501 n y ND C4D HEC sing 502 n y C1D C2D HEC doub 503 n y C2D C3D HEC sing 504 n y C2D CMD HEC sing 505 n n C3D C4D HEC doub 506 n y C3D CAD HEC sing 507 n n CMD HMD1 HEC sing 508 n n CMD HMD2 HEC sing 509 n n CMD HMD3 HEC sing 510 n n CAD CBD HEC sing 511 n n CAD HAD1 HEC sing 512 n n CAD HAD2 HEC sing 513 n n CBD CGD HEC sing 514 n n CBD HBD1 HEC sing 515 n n CBD HBD2 HEC sing 516 n n CGD O1D HEC doub 517 n n CGD O2D HEC sing 518 n n O2D H2D HEC sing 519 n n # _atom_sites.entry_id 8ZOW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code W 12 A1D6P A 1 401 401 A1D6P LIG . X 12 A1D6P A 1 402 402 A1D6P LIG . Y 13 HEM A 1 403 404 HEM HEM . Z 13 HEM A 1 404 405 HEM HEM . AA 14 PEE A 1 405 497 PEE PEE . BA 15 CDL A 1 406 504 CDL CDL . CA 16 HEC B 1 401 406 HEC HEC . DA 17 FES C 1 301 302 FES FES . EA 12 A1D6P a 1 401 401 A1D6P LIG . FA 12 A1D6P a 1 402 402 A1D6P LIG . GA 13 HEM a 1 403 401 HEM HEM . HA 13 HEM a 1 404 402 HEM HEM . IA 14 PEE a 1 405 498 PEE PEE . JA 15 CDL a 1 406 501 CDL CDL . KA 16 HEC b 1 401 403 HEC HEC . LA 17 FES c 1 301 303 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . CA 16 116.914 135.832 208.629 1 87.73 ? FE HEC 401 B 1 HETATM 2 C CHA HEC . . . CA 16 117.838 133.283 206.532 1 87.73 ? CHA HEC 401 B 1 HETATM 3 C CHB HEC . . . CA 16 115.285 137.389 206.036 1 87.73 ? CHB HEC 401 B 1 HETATM 4 C CHC HEC . . . CA 16 115.802 138.326 210.817 1 87.73 ? CHC HEC 401 B 1 HETATM 5 C CHD HEC . . . CA 16 118.08 134.032 211.368 1 87.73 ? CHD HEC 401 B 1 HETATM 6 N NA HEC . . . CA 16 116.628 135.411 206.589 1 87.73 ? NA HEC 401 B 1 HETATM 7 C C1A HEC . . . CA 16 117.044 134.347 205.891 1 87.73 ? C1A HEC 401 B 1 HETATM 8 C C2A HEC . . . CA 16 116.672 134.345 204.452 1 87.73 ? C2A HEC 401 B 1 HETATM 9 C C3A HEC . . . CA 16 115.899 135.574 204.296 1 87.73 ? C3A HEC 401 B 1 HETATM 10 C C4A HEC . . . CA 16 115.945 136.127 205.677 1 87.73 ? C4A HEC 401 B 1 HETATM 11 C CMA HEC . . . CA 16 115.237 136.129 203.059 1 87.73 ? CMA HEC 401 B 1 HETATM 12 C CAA HEC . . . CA 16 116.972 133.331 203.391 1 87.73 ? CAA HEC 401 B 1 HETATM 13 C CBA HEC . . . CA 16 115.822 132.351 203.383 1 87.73 ? CBA HEC 401 B 1 HETATM 14 C CGA HEC . . . CA 16 116.034 131.442 202.219 1 87.73 ? CGA HEC 401 B 1 HETATM 15 O O1A HEC . . . CA 16 115.062 130.858 201.7 1 87.73 ? O1A HEC 401 B 1 HETATM 16 O O2A HEC . . . CA 16 117.196 131.312 201.82 1 87.73 ? O2A HEC 401 B 1 HETATM 17 N NB HEC . . . CA 16 115.757 137.57 208.462 1 87.73 ? NB HEC 401 B 1 HETATM 18 C C1B HEC . . . CA 16 115.153 138.034 207.353 1 87.73 ? C1B HEC 401 B 1 HETATM 19 C C2B HEC . . . CA 16 114.35 139.268 207.513 1 87.73 ? C2B HEC 401 B 1 HETATM 20 C C3B HEC . . . CA 16 114.53 139.533 208.947 1 87.73 ? C3B HEC 401 B 1 HETATM 21 C C4B HEC . . . CA 16 115.387 138.437 209.424 1 87.73 ? C4B HEC 401 B 1 HETATM 22 C CMB HEC . . . CA 16 113.603 139.996 206.427 1 87.73 ? CMB HEC 401 B 1 HETATM 23 C CAB HEC . . . CA 16 114.011 140.625 209.794 1 87.73 ? CAB HEC 401 B 1 HETATM 24 C CBB HEC . . . CA 16 113.135 141.728 209.286 1 87.73 ? CBB HEC 401 B 1 HETATM 25 N NC HEC . . . CA 16 116.934 136.133 210.715 1 87.73 ? NC HEC 401 B 1 HETATM 26 C C1C HEC . . . CA 16 116.444 137.17 211.427 1 87.73 ? C1C HEC 401 B 1 HETATM 27 C C2C HEC . . . CA 16 116.612 137.111 212.89 1 87.73 ? C2C HEC 401 B 1 HETATM 28 C C3C HEC . . . CA 16 117.265 135.807 213.028 1 87.73 ? C3C HEC 401 B 1 HETATM 29 C C4C HEC . . . CA 16 117.432 135.313 211.659 1 87.73 ? C4C HEC 401 B 1 HETATM 30 C CMC HEC . . . CA 16 116.164 138.132 213.902 1 87.73 ? CMC HEC 401 B 1 HETATM 31 C CAC HEC . . . CA 16 117.764 135.086 214.222 1 87.73 ? CAC HEC 401 B 1 HETATM 32 C CBC HEC . . . CA 16 117.633 135.599 215.623 1 87.73 ? CBC HEC 401 B 1 HETATM 33 N ND HEC . . . CA 16 117.82 133.968 208.907 1 87.73 ? ND HEC 401 B 1 HETATM 34 C C1D HEC . . . CA 16 118.215 133.39 210.057 1 87.73 ? C1D HEC 401 B 1 HETATM 35 C C2D HEC . . . CA 16 118.813 132.053 209.92 1 87.73 ? C2D HEC 401 B 1 HETATM 36 C C3D HEC . . . CA 16 118.754 131.838 208.476 1 87.73 ? C3D HEC 401 B 1 HETATM 37 C C4D HEC . . . CA 16 118.107 133.059 207.966 1 87.73 ? C4D HEC 401 B 1 HETATM 38 C CMD HEC . . . CA 16 119.364 131.152 210.992 1 87.73 ? CMD HEC 401 B 1 HETATM 39 C CAD HEC . . . CA 16 119.182 130.631 207.719 1 87.73 ? CAD HEC 401 B 1 HETATM 40 C CBD HEC . . . CA 16 117.958 129.738 207.798 1 87.73 ? CBD HEC 401 B 1 HETATM 41 C CGD HEC . . . CA 16 118.34 128.425 207.215 1 87.73 ? CGD HEC 401 B 1 HETATM 42 O O1D HEC . . . CA 16 117.718 127.405 207.532 1 87.73 ? O1D HEC 401 B 1 HETATM 43 O O2D HEC . . . CA 16 119.285 128.432 206.422 1 87.73 ? O2D HEC 401 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #