data_8ZPA # _model_server_result.job_id Kh_RaiXL9oZl8To9Vj4xCg _model_server_result.datetime_utc '2025-07-17 09:50:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 8ZPA # _exptl.entry_id 8ZPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.92 _cell.angle_gamma 90 _cell.entry_id 8ZPA _cell.length_a 185.705 _cell.length_b 38.441 _cell.length_c 93.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 53 1_555 A SG CYS 68 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 81 A CYS 75 1_555 A SG CYS 97 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 96 A CYS 90 1_555 A SG CYS 107 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 130 A CYS 124 1_555 A SG CYS 175 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 174 A CYS 168 1_555 A SG CYS 183 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 A SG CYS 206 A CYS 200 1_555 A SG CYS 252 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 251 A CYS 245 1_555 A SG CYS 259 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf8 A SG CYS 271 A CYS 265 1_555 A SG CYS 285 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 A SG CYS 284 A CYS 278 1_555 A SG CYS 295 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf10 A SG CYS 322 A CYS 316 1_555 A SG CYS 367 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 A SG CYS 366 A CYS 360 1_555 A SG CYS 375 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf12 A SG CYS 398 A CYS 392 1_555 A SG CYS 444 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf13 A SG CYS 443 A CYS 437 1_555 A SG CYS 454 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf14 A SG CYS 467 A CYS 461 1_555 A SG CYS 483 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf15 A SG CYS 482 A CYS 476 1_555 A SG CYS 493 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 A SG CYS 520 A CYS 514 1_555 A SG CYS 565 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf17 A SG CYS 564 A CYS 558 1_555 A SG CYS 573 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 A CE LYS 205 A LYS 199 1_555 B N13 UI8 . A UI8 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 267 n n C1 O2 PLM doub 268 n n C1 C2 PLM sing 269 n n O1 H PLM sing 270 n n C2 C3 PLM sing 271 n n C2 H21 PLM sing 272 n n C2 H22 PLM sing 273 n n C3 C4 PLM sing 274 n n C3 H31 PLM sing 275 n n C3 H32 PLM sing 276 n n C4 C5 PLM sing 277 n n C4 H41 PLM sing 278 n n C4 H42 PLM sing 279 n n C5 C6 PLM sing 280 n n C5 H51 PLM sing 281 n n C5 H52 PLM sing 282 n n C6 C7 PLM sing 283 n n C6 H61 PLM sing 284 n n C6 H62 PLM sing 285 n n C7 C8 PLM sing 286 n n C7 H71 PLM sing 287 n n C7 H72 PLM sing 288 n n C8 C9 PLM sing 289 n n C8 H81 PLM sing 290 n n C8 H82 PLM sing 291 n n C9 CA PLM sing 292 n n C9 H91 PLM sing 293 n n C9 H92 PLM sing 294 n n CA CB PLM sing 295 n n CA HA1 PLM sing 296 n n CA HA2 PLM sing 297 n n CB CC PLM sing 298 n n CB HB1 PLM sing 299 n n CB HB2 PLM sing 300 n n CC CD PLM sing 301 n n CC HC1 PLM sing 302 n n CC HC2 PLM sing 303 n n CD CE PLM sing 304 n n CD HD1 PLM sing 305 n n CD HD2 PLM sing 306 n n CE CF PLM sing 307 n n CE HE1 PLM sing 308 n n CE HE2 PLM sing 309 n n CF CG PLM sing 310 n n CF HF1 PLM sing 311 n n CF HF2 PLM sing 312 n n CG HG1 PLM sing 313 n n CG HG2 PLM sing 314 n n CG HG3 PLM sing 315 n n # _atom_sites.entry_id 8ZPA _atom_sites.fract_transf_matrix[1][1] 0.005385 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001335 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UI8 A 1 601 601 UI8 LIG . C 3 EDO A 1 602 701 EDO EDO . D 3 EDO A 1 603 702 EDO EDO . E 3 EDO A 1 604 703 EDO EDO . F 4 PLM A 1 605 801 PLM PLM . G 5 STE A 1 606 901 STE STE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . F 4 68.577 0.529 35.671 1 49.65 ? C1 PLM 605 A 1 HETATM 2 O O1 PLM . . . F 4 68.884 0.817 36.859 1 45.05 ? O1 PLM 605 A 1 HETATM 3 O O2 PLM . . . F 4 68.785 -0.635 35.236 1 46.94 ? O2 PLM 605 A 1 HETATM 4 C C2 PLM . . . F 4 67.947 1.586 34.763 1 45.69 ? C2 PLM 605 A 1 HETATM 5 C C3 PLM . . . F 4 69.033 2.422 34.088 1 52.13 ? C3 PLM 605 A 1 HETATM 6 C C4 PLM . . . F 4 69.823 1.549 33.115 1 53.66 ? C4 PLM 605 A 1 HETATM 7 C C5 PLM . . . F 4 70.841 2.387 32.339 1 50.97 ? C5 PLM 605 A 1 HETATM 8 C C6 PLM . . . F 4 71.701 1.462 31.476 1 57.42 ? C6 PLM 605 A 1 HETATM 9 C C7 PLM . . . F 4 72.721 2.277 30.682 1 59.69 ? C7 PLM 605 A 1 HETATM 10 C C8 PLM . . . F 4 72.874 1.703 29.273 1 63.68 ? C8 PLM 605 A 1 HETATM 11 C C9 PLM . . . F 4 73.329 0.247 29.337 1 57.71 ? C9 PLM 605 A 1 HETATM 12 C CA PLM . . . F 4 72.651 -0.538 28.216 1 64.96 ? CA PLM 605 A 1 HETATM 13 C CB PLM . . . F 4 72.888 -2.034 28.417 1 60.09 ? CB PLM 605 A 1 HETATM 14 C CC PLM . . . F 4 71.654 -2.8 27.944 1 53.28 ? CC PLM 605 A 1 HETATM 15 C CD PLM . . . F 4 72.053 -4.233 27.609 1 62.63 ? CD PLM 605 A 1 HETATM 16 C CE PLM . . . F 4 71.316 -4.675 26.348 1 60.25 ? CE PLM 605 A 1 HETATM 17 C CF PLM . . . F 4 71.913 -5.991 25.856 1 57.49 ? CF PLM 605 A 1 HETATM 18 C CG PLM . . . F 4 71.436 -6.262 24.431 1 59.11 ? CG PLM 605 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 18 #