data_8ZPH
#
_model_server_result.job_id            yl3qo1qgvdOYfF9dyYAX5g 
_model_server_result.datetime_utc      '2025-09-12 19:20:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8zph 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    8ZPH 
#
_exptl.entry_id    8ZPH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              89.093 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ALANINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114 
_cell.angle_gamma         90 
_cell.entry_id            8ZPH 
_cell.length_a            90.2 
_cell.length_b            112.9 
_cell.length_c            91.8 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZPH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,O,P 1 1 
C,D,J,K,L,M,N,Q,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 A CYS 5 1_555 B SG CYS 96 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 96 A CYS 92 1_555 B SG CYS 9 B CYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 C SG CYS 9 C CYS 5 1_555 D SG CYS 96 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf4 C SG CYS 96 C CYS 92 1_555 D SG CYS 9 D CYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
covale ? covale1 K N ALA . C ALA 402 1_555 M C4A PLP . D PLP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
#
_chem_comp.formula           'C3 H7 N O2' 
_chem_comp.formula_weight    89.093 
_chem_comp.id                ALA 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              ALANINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ALA sing 1 n n 
N H ALA sing 2 n n 
N H2 ALA sing 3 n n 
CA C ALA sing 4 n n 
CA CB ALA sing 5 n n 
CA HA ALA sing 6 n n 
C O ALA doub 7 n n 
C OXT ALA sing 8 n n 
CB HB1 ALA sing 9 n n 
CB HB2 ALA sing 10 n n 
CB HB3 ALA sing 11 n n 
OXT HXT ALA sing 12 n n 
#
_atom_sites.entry_id                     8ZPH 
_atom_sites.fract_transf_matrix[1][1]    0.011086 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004936 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008857 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011924 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PLP A 1 401 401 PLP PLP . 
F 3 CL A 1 402 1 CL CL . 
G 4 ALA B 1 401 402 ALA ALA . 
H 2 PLP B 1 402 401 PLP PLP . 
I 3 CL B 1 403 2 CL CL . 
J 2 PLP C 1 401 401 PLP PLP . 
K 4 ALA C 1 402 402 ALA ALA . 
L 3 CL C 1 403 4 CL CL . 
M 2 PLP D 1 401 401 PLP PLP . 
N 3 CL D 1 402 3 CL CL . 
O 5 HOH A 1 501 20 HOH HOH . 
O 5 HOH A 2 502 22 HOH HOH . 
O 5 HOH A 3 503 66 HOH HOH . 
O 5 HOH A 4 504 5 HOH HOH . 
O 5 HOH A 5 505 14 HOH HOH . 
O 5 HOH A 6 506 60 HOH HOH . 
O 5 HOH A 7 507 62 HOH HOH . 
O 5 HOH A 8 508 18 HOH HOH . 
O 5 HOH A 9 509 26 HOH HOH . 
O 5 HOH A 10 510 7 HOH HOH . 
O 5 HOH A 11 511 64 HOH HOH . 
O 5 HOH A 12 512 21 HOH HOH . 
O 5 HOH A 13 513 61 HOH HOH . 
O 5 HOH A 14 514 13 HOH HOH . 
O 5 HOH A 15 515 6 HOH HOH . 
O 5 HOH A 16 516 4 HOH HOH . 
O 5 HOH A 17 517 12 HOH HOH . 
O 5 HOH A 18 518 24 HOH HOH . 
O 5 HOH A 19 519 63 HOH HOH . 
O 5 HOH A 20 520 25 HOH HOH . 
O 5 HOH A 21 521 75 HOH HOH . 
O 5 HOH A 22 522 28 HOH HOH . 
O 5 HOH A 23 523 16 HOH HOH . 
O 5 HOH A 24 524 59 HOH HOH . 
O 5 HOH A 25 525 69 HOH HOH . 
O 5 HOH A 26 526 3 HOH HOH . 
O 5 HOH A 27 527 67 HOH HOH . 
O 5 HOH A 28 528 9 HOH HOH . 
O 5 HOH A 29 529 84 HOH HOH . 
O 5 HOH A 30 530 65 HOH HOH . 
O 5 HOH A 31 531 8 HOH HOH . 
P 5 HOH B 1 501 31 HOH HOH . 
P 5 HOH B 2 502 10 HOH HOH . 
P 5 HOH B 3 503 11 HOH HOH . 
P 5 HOH B 4 504 70 HOH HOH . 
P 5 HOH B 5 505 27 HOH HOH . 
P 5 HOH B 6 506 74 HOH HOH . 
P 5 HOH B 7 507 32 HOH HOH . 
P 5 HOH B 8 508 15 HOH HOH . 
P 5 HOH B 9 509 71 HOH HOH . 
P 5 HOH B 10 510 34 HOH HOH . 
P 5 HOH B 11 511 29 HOH HOH . 
P 5 HOH B 12 512 68 HOH HOH . 
P 5 HOH B 13 513 72 HOH HOH . 
P 5 HOH B 14 514 73 HOH HOH . 
P 5 HOH B 15 515 30 HOH HOH . 
P 5 HOH B 16 516 33 HOH HOH . 
Q 5 HOH C 1 501 19 HOH HOH . 
Q 5 HOH C 2 502 77 HOH HOH . 
Q 5 HOH C 3 503 41 HOH HOH . 
Q 5 HOH C 4 504 83 HOH HOH . 
Q 5 HOH C 5 505 49 HOH HOH . 
Q 5 HOH C 6 506 48 HOH HOH . 
Q 5 HOH C 7 507 37 HOH HOH . 
Q 5 HOH C 8 508 35 HOH HOH . 
Q 5 HOH C 9 509 17 HOH HOH . 
Q 5 HOH C 10 510 79 HOH HOH . 
Q 5 HOH C 11 511 80 HOH HOH . 
Q 5 HOH C 12 512 58 HOH HOH . 
Q 5 HOH C 13 513 76 HOH HOH . 
Q 5 HOH C 14 514 39 HOH HOH . 
Q 5 HOH C 15 515 82 HOH HOH . 
Q 5 HOH C 16 516 36 HOH HOH . 
Q 5 HOH C 17 517 38 HOH HOH . 
Q 5 HOH C 18 518 40 HOH HOH . 
Q 5 HOH C 19 519 44 HOH HOH . 
Q 5 HOH C 20 520 78 HOH HOH . 
Q 5 HOH C 21 521 81 HOH HOH . 
R 5 HOH D 1 501 46 HOH HOH . 
R 5 HOH D 2 502 55 HOH HOH . 
R 5 HOH D 3 503 57 HOH HOH . 
R 5 HOH D 4 504 53 HOH HOH . 
R 5 HOH D 5 505 50 HOH HOH . 
R 5 HOH D 6 506 51 HOH HOH . 
R 5 HOH D 7 507 56 HOH HOH . 
R 5 HOH D 8 508 54 HOH HOH . 
R 5 HOH D 9 509 52 HOH HOH . 
R 5 HOH D 10 510 47 HOH HOH . 
R 5 HOH D 11 511 45 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ALA . . . G 4 15.178 -3.239 11.899 1 48.7 ? N ALA 401 B 1 
HETATM 2 C CA ALA . . . G 4 15.203 -4.416 12.784 1 47.61 ? CA ALA 401 B 1 
HETATM 3 C C ALA . . . G 4 15.078 -3.917 14.185 1 45.26 ? C ALA 401 B 1 
HETATM 4 O O ALA . . . G 4 14.957 -4.632 15.127 1 50.29 ? O ALA 401 B 1 
HETATM 5 C CB ALA . . . G 4 16.507 -5.251 12.613 1 46.38 ? CB ALA 401 B 1 
HETATM 6 O OXT ALA . . . G 4 15.119 -2.61 14.242 1 56.78 ? OXT ALA 401 B 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#