data_8ZTB # _model_server_result.job_id UQG62M-H3tKNJrUisYOBMg _model_server_result.datetime_utc '2025-06-25 03:22:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ztb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":302}' # _entry.id 8ZTB # _exptl.entry_id 8ZTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.348 _cell.angle_gamma 90 _cell.entry_id 8ZTB _cell.length_a 103.418 _cell.length_b 49.301 _cell.length_c 110.696 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 78 B HIS 78 1_555 F ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc2 A OD2 ASP 80 B ASP 80 1_555 E ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc3 A O VAL 143 B VAL 143 1_555 G NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.128 ? metalc ? metalc4 A O GLY 155 B GLY 155 1_555 G NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? metalc ? metalc5 A SG CYS 157 B CYS 157 1_555 E ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc6 A NE2 HIS 196 B HIS 196 1_555 E ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc7 B NE2 HIS 76 A HIS 76 1_555 N ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc8 B ND1 HIS 78 A HIS 78 1_555 N ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc9 B OD2 ASP 80 A ASP 80 1_555 O ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc10 B SG CYS 157 A CYS 157 1_555 O ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 224 n n C1 C2 PEG sing 225 n n C1 H11 PEG sing 226 n n C1 H12 PEG sing 227 n n O1 HO1 PEG sing 228 n n C2 O2 PEG sing 229 n n C2 H21 PEG sing 230 n n C2 H22 PEG sing 231 n n O2 C3 PEG sing 232 n n C3 C4 PEG sing 233 n n C3 H31 PEG sing 234 n n C3 H32 PEG sing 235 n n C4 O4 PEG sing 236 n n C4 H41 PEG sing 237 n n C4 H42 PEG sing 238 n n O4 HO4 PEG sing 239 n n # _atom_sites.entry_id 8ZTB _atom_sites.fract_transf_matrix[1][1] 0.009669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000396 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009041 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT B 1 301 301 ACT ACT . D 2 ACT B 1 302 302 ACT ACT . E 3 ZN B 1 303 1 ZN ZN . F 3 ZN B 1 304 2 ZN ZN . G 4 NA B 1 305 1 NA NA . H 5 CL B 1 306 1 CL CL . I 5 CL B 1 307 3 CL CL . J 5 CL B 1 308 4 CL CL . K 5 CL B 1 309 5 CL CL . L 6 PEG A 1 301 301 PEG PEG . M 6 PEG A 1 302 302 PEG PEG . N 3 ZN A 1 303 3 ZN ZN . O 3 ZN A 1 304 4 ZN ZN . P 7 PO4 A 1 305 1 PO4 PO4 . Q 7 PO4 A 1 306 2 PO4 PO4 . R 8 SO4 A 1 307 1 SO4 SO4 . S 9 HOH B 1 401 23 HOH HOH . S 9 HOH B 2 402 25 HOH HOH . S 9 HOH B 3 403 24 HOH HOH . S 9 HOH B 4 404 4 HOH HOH . S 9 HOH B 5 405 8 HOH HOH . S 9 HOH B 6 406 46 HOH HOH . S 9 HOH B 7 407 11 HOH HOH . S 9 HOH B 8 408 38 HOH HOH . S 9 HOH B 9 409 14 HOH HOH . S 9 HOH B 10 410 9 HOH HOH . T 9 HOH A 1 401 19 HOH HOH . T 9 HOH A 2 402 40 HOH HOH . T 9 HOH A 3 403 49 HOH HOH . T 9 HOH A 4 404 22 HOH HOH . T 9 HOH A 5 405 16 HOH HOH . T 9 HOH A 6 406 32 HOH HOH . T 9 HOH A 7 407 54 HOH HOH . T 9 HOH A 8 408 35 HOH HOH . T 9 HOH A 9 409 18 HOH HOH . T 9 HOH A 10 410 41 HOH HOH . T 9 HOH A 11 411 34 HOH HOH . T 9 HOH A 12 412 15 HOH HOH . T 9 HOH A 13 413 52 HOH HOH . T 9 HOH A 14 414 21 HOH HOH . T 9 HOH A 15 415 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . M 6 23.734 -13.597 25.893 1 45.92 ? C1 PEG 302 A 1 HETATM 2 O O1 PEG . . . M 6 22.837 -14.005 26.952 1 45.36 ? O1 PEG 302 A 1 HETATM 3 C C2 PEG . . . M 6 24.247 -12.141 26.015 1 44.02 ? C2 PEG 302 A 1 HETATM 4 O O2 PEG . . . M 6 25.301 -11.832 25.079 1 43.26 ? O2 PEG 302 A 1 HETATM 5 C C3 PEG . . . M 6 26.506 -11.278 25.65 1 41.53 ? C3 PEG 302 A 1 HETATM 6 C C4 PEG . . . M 6 27.042 -9.998 25.006 1 38.98 ? C4 PEG 302 A 1 HETATM 7 O O4 PEG . . . M 6 28.159 -9.455 25.738 1 35.4 ? O4 PEG 302 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #