data_8ZTG
#
_model_server_result.job_id            jagY5g-loLSF5XdFFzYNtA 
_model_server_result.datetime_utc      '2025-07-20 08:18:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ztg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    8ZTG 
#
_exptl.entry_id    8ZTG 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ZTG 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZTG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 514 n n 
CBA CAB Y01 sing 515 n n 
CBA CAN Y01 sing 516 n n 
CAN CAJ Y01 sing 517 n n 
CAJ CAO Y01 sing 518 n n 
CAO CBB Y01 sing 519 n n 
CBB CAC Y01 sing 520 n n 
CBB CBE Y01 sing 521 n n 
CBE CAP Y01 sing 522 n n 
CBE CBI Y01 sing 523 n n 
CAP CAQ Y01 sing 524 n n 
CAQ CBG Y01 sing 525 n n 
CBG CBI Y01 sing 526 n n 
CBG CBD Y01 sing 527 n n 
CBI CAE Y01 sing 528 n n 
CBI CAU Y01 sing 529 n n 
CAU CAS Y01 sing 530 n n 
CAS CBF Y01 sing 531 n n 
CBF CBD Y01 sing 532 n n 
CBF CBH Y01 sing 533 n n 
CBD CAK Y01 sing 534 n n 
CAK CAI Y01 sing 535 n n 
CAI CAZ Y01 doub 536 n n 
CAZ CAV Y01 sing 537 n n 
CAZ CBH Y01 sing 538 n n 
CAV CBC Y01 sing 539 n n 
CBH CAD Y01 sing 540 n n 
CBH CAT Y01 sing 541 n n 
CAT CAR Y01 sing 542 n n 
CAR CBC Y01 sing 543 n n 
CBC OAW Y01 sing 544 n n 
OAW CAY Y01 sing 545 n n 
CAY OAG Y01 doub 546 n n 
CAY CAM Y01 sing 547 n n 
CAM CAL Y01 sing 548 n n 
CAL CAX Y01 sing 549 n n 
CAX OAH Y01 sing 550 n n 
CAX OAF Y01 doub 551 n n 
CAA HAA1 Y01 sing 552 n n 
CAA HAA2 Y01 sing 553 n n 
CAA HAA3 Y01 sing 554 n n 
CBA HBA Y01 sing 555 n n 
CAB HAB1 Y01 sing 556 n n 
CAB HAB2 Y01 sing 557 n n 
CAB HAB3 Y01 sing 558 n n 
CAN HAN1 Y01 sing 559 n n 
CAN HAN2 Y01 sing 560 n n 
CAJ HAJ1 Y01 sing 561 n n 
CAJ HAJ2 Y01 sing 562 n n 
CAO HAO1 Y01 sing 563 n n 
CAO HAO2 Y01 sing 564 n n 
CBB HBB Y01 sing 565 n n 
CAC HAC1 Y01 sing 566 n n 
CAC HAC2 Y01 sing 567 n n 
CAC HAC3 Y01 sing 568 n n 
CBE HBE Y01 sing 569 n n 
CAP HAP1 Y01 sing 570 n n 
CAP HAP2 Y01 sing 571 n n 
CAQ HAQ1 Y01 sing 572 n n 
CAQ HAQ2 Y01 sing 573 n n 
CBG HBG Y01 sing 574 n n 
CBD HBD Y01 sing 575 n n 
CAE HAE1 Y01 sing 576 n n 
CAE HAE2 Y01 sing 577 n n 
CAE HAE3 Y01 sing 578 n n 
CAU HAU1 Y01 sing 579 n n 
CAU HAU2 Y01 sing 580 n n 
CAS HAS1 Y01 sing 581 n n 
CAS HAS2 Y01 sing 582 n n 
CBF HBF Y01 sing 583 n n 
CAK HAK1 Y01 sing 584 n n 
CAK HAK2 Y01 sing 585 n n 
CAI HAI Y01 sing 586 n n 
CAV HAV1 Y01 sing 587 n n 
CAV HAV2 Y01 sing 588 n n 
CBC HBC Y01 sing 589 n n 
CAD HAD1 Y01 sing 590 n n 
CAD HAD2 Y01 sing 591 n n 
CAD HAD3 Y01 sing 592 n n 
CAT HAT1 Y01 sing 593 n n 
CAT HAT2 Y01 sing 594 n n 
CAR HAR1 Y01 sing 595 n n 
CAR HAR2 Y01 sing 596 n n 
CAM HAM1 Y01 sing 597 n n 
CAM HAM2 Y01 sing 598 n n 
CAL HAL1 Y01 sing 599 n n 
CAL HAL2 Y01 sing 600 n n 
OAH HAH Y01 sing 601 n n 
#
_atom_sites.entry_id                     8ZTG 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 Y01 A 1 601 602 Y01 Y01 . 
D 2 Y01 A 1 602 603 Y01 Y01 . 
E 2 Y01 A 1 603 601 Y01 Y01 . 
F 2 Y01 B 1 601 601 Y01 Y01 . 
G 2 Y01 B 1 602 602 Y01 Y01 . 
H 2 Y01 B 1 603 603 Y01 Y01 . 
I 3 MLT B 1 604 605 MLT MLT . 
J 4 3PH B 1 605 612 3PH 3PH . 
K 5 HOH A 1 701 1 HOH HOH . 
K 5 HOH A 2 702 5 HOH HOH . 
K 5 HOH A 3 703 1 HOH HOH . 
L 5 HOH B 1 701 2 HOH HOH . 
L 5 HOH B 2 702 3 HOH HOH . 
L 5 HOH B 3 703 2 HOH HOH . 
L 5 HOH B 4 704 6 HOH HOH . 
L 5 HOH B 5 705 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . F 2 98.17 107.648 116.14 1 27.54 ? CAA Y01 601 B 1 
HETATM 2 C CBA Y01 . . . F 2 99.385 107.758 115.206 1 31.63 ? CBA Y01 601 B 1 
HETATM 3 C CAB Y01 . . . F 2 99.815 109.214 115.133 1 30.34 ? CAB Y01 601 B 1 
HETATM 4 C CAN Y01 . . . F 2 99.144 107.186 113.792 1 34.82 ? CAN Y01 601 B 1 
HETATM 5 C CAJ Y01 . . . F 2 99.173 105.656 113.642 1 32.37 ? CAJ Y01 601 B 1 
HETATM 6 C CAO Y01 . . . F 2 98.091 104.895 114.402 1 27.68 ? CAO Y01 601 B 1 
HETATM 7 C CBB Y01 . . . F 2 97.895 103.431 114.039 1 29.83 ? CBB Y01 601 B 1 
HETATM 8 C CAC Y01 . . . F 2 99.086 102.668 114.566 1 30.19 ? CAC Y01 601 B 1 
HETATM 9 C CBE Y01 . . . F 2 96.558 102.877 114.579 1 30.81 ? CBE Y01 601 B 1 
HETATM 10 C CAP Y01 . . . F 2 95.353 103.109 113.667 1 25.34 ? CAP Y01 601 B 1 
HETATM 11 C CAQ Y01 . . . F 2 94.315 102.066 114.021 1 28.04 ? CAQ Y01 601 B 1 
HETATM 12 C CBG Y01 . . . F 2 94.933 101.338 115.181 1 30.05 ? CBG Y01 601 B 1 
HETATM 13 C CBI Y01 . . . F 2 96.428 101.37 114.86 1 29.21 ? CBI Y01 601 B 1 
HETATM 14 C CAE Y01 . . . F 2 96.788 100.523 113.642 1 27.43 ? CAE Y01 601 B 1 
HETATM 15 C CAU Y01 . . . F 2 97.098 100.803 116.115 1 27.55 ? CAU Y01 601 B 1 
HETATM 16 C CAS Y01 . . . F 2 96.554 99.442 116.493 1 29.06 ? CAS Y01 601 B 1 
HETATM 17 C CBF Y01 . . . F 2 95.058 99.403 116.713 1 30.92 ? CBF Y01 601 B 1 
HETATM 18 C CBD Y01 . . . F 2 94.426 99.938 115.508 1 28.46 ? CBD Y01 601 B 1 
HETATM 19 C CAK Y01 . . . F 2 92.986 100.094 115.718 1 26.75 ? CAK Y01 601 B 1 
HETATM 20 C CAI Y01 . . . F 2 92.216 98.861 116.024 1 29.71 ? CAI Y01 601 B 1 
HETATM 21 C CAZ Y01 . . . F 2 92.964 97.94 116.731 1 29.39 ? CAZ Y01 601 B 1 
HETATM 22 C CAV Y01 . . . F 2 92.231 96.72 117.028 1 31.07 ? CAV Y01 601 B 1 
HETATM 23 C CBH Y01 . . . F 2 94.396 98.09 117.158 1 28.42 ? CBH Y01 601 B 1 
HETATM 24 C CAD Y01 . . . F 2 95.044 96.922 116.402 1 23.35 ? CAD Y01 601 B 1 
HETATM 25 C CAT Y01 . . . F 2 94.374 97.741 118.652 1 30.68 ? CAT Y01 601 B 1 
HETATM 26 C CAR Y01 . . . F 2 93.462 96.545 119.068 1 26.71 ? CAR Y01 601 B 1 
HETATM 27 C CBC Y01 . . . F 2 92.049 96.596 118.503 1 28.88 ? CBC Y01 601 B 1 
HETATM 28 O OAW Y01 . . . F 2 91.29 95.421 118.629 1 34.15 ? OAW Y01 601 B 1 
HETATM 29 C CAY Y01 . . . F 2 90.684 95.084 119.809 1 27.79 ? CAY Y01 601 B 1 
HETATM 30 O OAG Y01 . . . F 2 89.497 95.294 119.828 1 30.64 ? OAG Y01 601 B 1 
HETATM 31 C CAM Y01 . . . F 2 91.477 94.471 120.908 1 30.48 ? CAM Y01 601 B 1 
HETATM 32 C CAL Y01 . . . F 2 90.588 93.639 121.824 1 30.36 ? CAL Y01 601 B 1 
HETATM 33 C CAX Y01 . . . F 2 89.96 92.378 121.158 1 29.25 ? CAX Y01 601 B 1 
HETATM 34 O OAH Y01 . . . F 2 89.366 91.573 121.894 1 33.29 ? OAH Y01 601 B 1 
HETATM 35 O OAF Y01 . . . F 2 90.095 92.265 119.929 1 28.4 ? OAF Y01 601 B 1 
HETATM 36 H HAA1 Y01 . . . F 2 97.427 106.91 115.826 1 28.45 ? HAA1 Y01 601 B 1 
HETATM 37 H HAA2 Y01 . . . F 2 97.611 108.578 116.274 1 28.92 ? HAA2 Y01 601 B 1 
HETATM 38 H HAA3 Y01 . . . F 2 98.416 107.324 117.161 1 29.08 ? HAA3 Y01 601 B 1 
HETATM 39 H HBA Y01 . . . F 2 100.208 107.179 115.689 1 29.1 ? HBA Y01 601 B 1 
HETATM 40 H HAB1 Y01 . . . F 2 100.703 109.362 114.51 1 29.58 ? HAB1 Y01 601 B 1 
HETATM 41 H HAB2 Y01 . . . F 2 100.041 109.64 116.116 1 29.02 ? HAB2 Y01 601 B 1 
HETATM 42 H HAB3 Y01 . . . F 2 99.058 109.878 114.691 1 28.73 ? HAB3 Y01 601 B 1 
HETATM 43 H HAN1 Y01 . . . F 2 99.885 107.631 113.104 1 29.31 ? HAN1 Y01 601 B 1 
HETATM 44 H HAN2 Y01 . . . F 2 98.175 107.567 113.421 1 28.68 ? HAN2 Y01 601 B 1 
HETATM 45 H HAJ1 Y01 . . . F 2 100.179 105.297 113.921 1 28.76 ? HAJ1 Y01 601 B 1 
HETATM 46 H HAJ2 Y01 . . . F 2 99.127 105.388 112.568 1 29.54 ? HAJ2 Y01 601 B 1 
HETATM 47 H HAO1 Y01 . . . F 2 97.12 105.409 114.253 1 28.71 ? HAO1 Y01 601 B 1 
HETATM 48 H HAO2 Y01 . . . F 2 98.245 104.982 115.487 1 28.71 ? HAO2 Y01 601 B 1 
HETATM 49 H HBB Y01 . . . F 2 97.852 103.336 112.921 1 28.47 ? HBB Y01 601 B 1 
HETATM 50 H HAC1 Y01 . . . F 2 99.095 102.666 115.666 1 29.31 ? HAC1 Y01 601 B 1 
HETATM 51 H HAC2 Y01 . . . F 2 100.034 103.087 114.224 1 28.89 ? HAC2 Y01 601 B 1 
HETATM 52 H HAC3 Y01 . . . F 2 99.155 101.609 114.304 1 29.22 ? HAC3 Y01 601 B 1 
HETATM 53 H HBE Y01 . . . F 2 96.355 103.432 115.518 1 29.89 ? HBE Y01 601 B 1 
HETATM 54 H HAP1 Y01 . . . F 2 94.938 104.125 113.736 1 28.61 ? HAP1 Y01 601 B 1 
HETATM 55 H HAP2 Y01 . . . F 2 95.616 103.04 112.597 1 28.21 ? HAP2 Y01 601 B 1 
HETATM 56 H HAQ1 Y01 . . . F 2 94.061 101.414 113.171 1 29.01 ? HAQ1 Y01 601 B 1 
HETATM 57 H HAQ2 Y01 . . . F 2 93.322 102.498 114.257 1 29 ? HAQ2 Y01 601 B 1 
HETATM 58 H HBG Y01 . . . F 2 94.693 101.958 116.086 1 30.14 ? HBG Y01 601 B 1 
HETATM 59 H HBD Y01 . . . F 2 94.602 99.242 114.643 1 28.47 ? HBD Y01 601 B 1 
HETATM 60 H HAE1 Y01 . . . F 2 97.501 99.72 113.805 1 29.39 ? HAE1 Y01 601 B 1 
HETATM 61 H HAE2 Y01 . . . F 2 97.263 101.081 112.826 1 27.94 ? HAE2 Y01 601 B 1 
HETATM 62 H HAE3 Y01 . . . F 2 95.907 100.044 113.19 1 29.02 ? HAE3 Y01 601 B 1 
HETATM 63 H HAU1 Y01 . . . F 2 96.982 101.496 116.972 1 29.27 ? HAU1 Y01 601 B 1 
HETATM 64 H HAU2 Y01 . . . F 2 98.189 100.786 116.004 1 28.95 ? HAU2 Y01 601 B 1 
HETATM 65 H HAS1 Y01 . . . F 2 97.113 99.071 117.372 1 29.76 ? HAS1 Y01 601 B 1 
HETATM 66 H HAS2 Y01 . . . F 2 96.849 98.727 115.704 1 29.17 ? HAS2 Y01 601 B 1 
HETATM 67 H HBF Y01 . . . F 2 94.877 100.083 117.58 1 30.45 ? HBF Y01 601 B 1 
HETATM 68 H HAK1 Y01 . . . F 2 92.429 100.561 114.903 1 28.68 ? HAK1 Y01 601 B 1 
HETATM 69 H HAK2 Y01 . . . F 2 92.838 100.764 116.611 1 29.09 ? HAK2 Y01 601 B 1 
HETATM 70 H HAI Y01 . . . F 2 91.205 98.818 115.685 1 29.34 ? HAI Y01 601 B 1 
HETATM 71 H HAV1 Y01 . . . F 2 91.337 96.661 116.402 1 29.57 ? HAV1 Y01 601 B 1 
HETATM 72 H HAV2 Y01 . . . F 2 92.731 95.854 116.534 1 28.14 ? HAV2 Y01 601 B 1 
HETATM 73 H HBC Y01 . . . F 2 91.405 97.453 118.824 1 28.26 ? HBC Y01 601 B 1 
HETATM 74 H HAD1 Y01 . . . F 2 96.132 96.909 116.518 1 28.04 ? HAD1 Y01 601 B 1 
HETATM 75 H HAD2 Y01 . . . F 2 94.866 96.928 115.33 1 27.66 ? HAD2 Y01 601 B 1 
HETATM 76 H HAD3 Y01 . . . F 2 94.755 95.933 116.764 1 28.07 ? HAD3 Y01 601 B 1 
HETATM 77 H HAT1 Y01 . . . F 2 94.09 98.617 119.27 1 30.57 ? HAT1 Y01 601 B 1 
HETATM 78 H HAT2 Y01 . . . F 2 95.414 97.523 118.961 1 29.62 ? HAT2 Y01 601 B 1 
HETATM 79 H HAR1 Y01 . . . F 2 93.43 96.476 120.172 1 29.36 ? HAR1 Y01 601 B 1 
HETATM 80 H HAR2 Y01 . . . F 2 93.899 95.586 118.753 1 28.55 ? HAR2 Y01 601 B 1 
HETATM 81 H HAM1 Y01 . . . F 2 91.959 95.282 121.49 1 29.4 ? HAM1 Y01 601 B 1 
HETATM 82 H HAM2 Y01 . . . F 2 92.326 93.873 120.538 1 29.51 ? HAM2 Y01 601 B 1 
HETATM 83 H HAL1 Y01 . . . F 2 91.138 93.304 122.72 1 29.68 ? HAL1 Y01 601 B 1 
HETATM 84 H HAL2 Y01 . . . F 2 89.771 94.25 122.236 1 28.83 ? HAL2 Y01 601 B 1 
#
_model_server_stats.io_time_ms              117 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           84 
#