data_8ZTG
#
_model_server_result.job_id            OuK7MY1m5LWju12pCz1KGA 
_model_server_result.datetime_utc      '2025-07-10 20:18:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ztg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    8ZTG 
#
_exptl.entry_id    8ZTG 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ZTG 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ZTG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 514 n n 
CBA CAB Y01 sing 515 n n 
CBA CAN Y01 sing 516 n n 
CAN CAJ Y01 sing 517 n n 
CAJ CAO Y01 sing 518 n n 
CAO CBB Y01 sing 519 n n 
CBB CAC Y01 sing 520 n n 
CBB CBE Y01 sing 521 n n 
CBE CAP Y01 sing 522 n n 
CBE CBI Y01 sing 523 n n 
CAP CAQ Y01 sing 524 n n 
CAQ CBG Y01 sing 525 n n 
CBG CBI Y01 sing 526 n n 
CBG CBD Y01 sing 527 n n 
CBI CAE Y01 sing 528 n n 
CBI CAU Y01 sing 529 n n 
CAU CAS Y01 sing 530 n n 
CAS CBF Y01 sing 531 n n 
CBF CBD Y01 sing 532 n n 
CBF CBH Y01 sing 533 n n 
CBD CAK Y01 sing 534 n n 
CAK CAI Y01 sing 535 n n 
CAI CAZ Y01 doub 536 n n 
CAZ CAV Y01 sing 537 n n 
CAZ CBH Y01 sing 538 n n 
CAV CBC Y01 sing 539 n n 
CBH CAD Y01 sing 540 n n 
CBH CAT Y01 sing 541 n n 
CAT CAR Y01 sing 542 n n 
CAR CBC Y01 sing 543 n n 
CBC OAW Y01 sing 544 n n 
OAW CAY Y01 sing 545 n n 
CAY OAG Y01 doub 546 n n 
CAY CAM Y01 sing 547 n n 
CAM CAL Y01 sing 548 n n 
CAL CAX Y01 sing 549 n n 
CAX OAH Y01 sing 550 n n 
CAX OAF Y01 doub 551 n n 
CAA HAA1 Y01 sing 552 n n 
CAA HAA2 Y01 sing 553 n n 
CAA HAA3 Y01 sing 554 n n 
CBA HBA Y01 sing 555 n n 
CAB HAB1 Y01 sing 556 n n 
CAB HAB2 Y01 sing 557 n n 
CAB HAB3 Y01 sing 558 n n 
CAN HAN1 Y01 sing 559 n n 
CAN HAN2 Y01 sing 560 n n 
CAJ HAJ1 Y01 sing 561 n n 
CAJ HAJ2 Y01 sing 562 n n 
CAO HAO1 Y01 sing 563 n n 
CAO HAO2 Y01 sing 564 n n 
CBB HBB Y01 sing 565 n n 
CAC HAC1 Y01 sing 566 n n 
CAC HAC2 Y01 sing 567 n n 
CAC HAC3 Y01 sing 568 n n 
CBE HBE Y01 sing 569 n n 
CAP HAP1 Y01 sing 570 n n 
CAP HAP2 Y01 sing 571 n n 
CAQ HAQ1 Y01 sing 572 n n 
CAQ HAQ2 Y01 sing 573 n n 
CBG HBG Y01 sing 574 n n 
CBD HBD Y01 sing 575 n n 
CAE HAE1 Y01 sing 576 n n 
CAE HAE2 Y01 sing 577 n n 
CAE HAE3 Y01 sing 578 n n 
CAU HAU1 Y01 sing 579 n n 
CAU HAU2 Y01 sing 580 n n 
CAS HAS1 Y01 sing 581 n n 
CAS HAS2 Y01 sing 582 n n 
CBF HBF Y01 sing 583 n n 
CAK HAK1 Y01 sing 584 n n 
CAK HAK2 Y01 sing 585 n n 
CAI HAI Y01 sing 586 n n 
CAV HAV1 Y01 sing 587 n n 
CAV HAV2 Y01 sing 588 n n 
CBC HBC Y01 sing 589 n n 
CAD HAD1 Y01 sing 590 n n 
CAD HAD2 Y01 sing 591 n n 
CAD HAD3 Y01 sing 592 n n 
CAT HAT1 Y01 sing 593 n n 
CAT HAT2 Y01 sing 594 n n 
CAR HAR1 Y01 sing 595 n n 
CAR HAR2 Y01 sing 596 n n 
CAM HAM1 Y01 sing 597 n n 
CAM HAM2 Y01 sing 598 n n 
CAL HAL1 Y01 sing 599 n n 
CAL HAL2 Y01 sing 600 n n 
OAH HAH Y01 sing 601 n n 
#
_atom_sites.entry_id                     8ZTG 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 Y01 A 1 601 602 Y01 Y01 . 
D 2 Y01 A 1 602 603 Y01 Y01 . 
E 2 Y01 A 1 603 601 Y01 Y01 . 
F 2 Y01 B 1 601 601 Y01 Y01 . 
G 2 Y01 B 1 602 602 Y01 Y01 . 
H 2 Y01 B 1 603 603 Y01 Y01 . 
I 3 MLT B 1 604 605 MLT MLT . 
J 4 3PH B 1 605 612 3PH 3PH . 
K 5 HOH A 1 701 1 HOH HOH . 
K 5 HOH A 2 702 5 HOH HOH . 
K 5 HOH A 3 703 1 HOH HOH . 
L 5 HOH B 1 701 2 HOH HOH . 
L 5 HOH B 2 702 3 HOH HOH . 
L 5 HOH B 3 703 2 HOH HOH . 
L 5 HOH B 4 704 6 HOH HOH . 
L 5 HOH B 5 705 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . D 2 85.848 114.204 107.099 1 38.95 ? CAA Y01 602 A 1 
HETATM 2 C CBA Y01 . . . D 2 86.857 113.642 106.087 1 38.12 ? CBA Y01 602 A 1 
HETATM 3 C CAB Y01 . . . D 2 86.466 112.207 105.751 1 35.24 ? CAB Y01 602 A 1 
HETATM 4 C CAN Y01 . . . D 2 88.313 113.727 106.606 1 37.62 ? CAN Y01 602 A 1 
HETATM 5 C CAJ Y01 . . . D 2 89.408 113.587 105.537 1 39.66 ? CAJ Y01 602 A 1 
HETATM 6 C CAO Y01 . . . D 2 89.68 112.141 105.032 1 36.71 ? CAO Y01 602 A 1 
HETATM 7 C CBB Y01 . . . D 2 91.167 111.697 104.955 1 40.43 ? CBB Y01 602 A 1 
HETATM 8 C CAC Y01 . . . D 2 91.295 110.312 105.585 1 38.83 ? CAC Y01 602 A 1 
HETATM 9 C CBE Y01 . . . D 2 91.785 111.711 103.522 1 36 ? CBE Y01 602 A 1 
HETATM 10 C CAP Y01 . . . D 2 91.844 113.114 102.867 1 33.22 ? CAP Y01 602 A 1 
HETATM 11 C CAQ Y01 . . . D 2 93.145 113.223 102.068 1 36.03 ? CAQ Y01 602 A 1 
HETATM 12 C CBG Y01 . . . D 2 93.656 111.794 102.011 1 35.46 ? CBG Y01 602 A 1 
HETATM 13 C CBI Y01 . . . D 2 93.262 111.22 103.387 1 35.65 ? CBI Y01 602 A 1 
HETATM 14 C CAE Y01 . . . D 2 94.139 111.771 104.529 1 37.38 ? CAE Y01 602 A 1 
HETATM 15 C CAU Y01 . . . D 2 93.497 109.712 103.225 1 34.96 ? CAU Y01 602 A 1 
HETATM 16 C CAS Y01 . . . D 2 94.939 109.354 102.801 1 35.93 ? CAS Y01 602 A 1 
HETATM 17 C CBF Y01 . . . D 2 95.502 110.124 101.58 1 35.96 ? CBF Y01 602 A 1 
HETATM 18 C CBD Y01 . . . D 2 95.15 111.568 101.707 1 36.62 ? CBD Y01 602 A 1 
HETATM 19 C CAK Y01 . . . D 2 95.42 112.265 100.437 1 37.96 ? CAK Y01 602 A 1 
HETATM 20 C CAI Y01 . . . D 2 96.783 112.152 99.839 1 36.55 ? CAI Y01 602 A 1 
HETATM 21 C CAZ Y01 . . . D 2 97.486 111.032 100.244 1 34.33 ? CAZ Y01 602 A 1 
HETATM 22 C CAV Y01 . . . D 2 98.821 110.939 99.657 1 38.95 ? CAV Y01 602 A 1 
HETATM 23 C CBH Y01 . . . D 2 97.009 109.982 101.216 1 33.99 ? CBH Y01 602 A 1 
HETATM 24 C CAD Y01 . . . D 2 97.927 110.345 102.405 1 34.46 ? CAD Y01 602 A 1 
HETATM 25 C CAT Y01 . . . D 2 97.481 108.604 100.64 1 35.54 ? CAT Y01 602 A 1 
HETATM 26 C CAR Y01 . . . D 2 98.758 108.6 99.727 1 34.5 ? CAR Y01 602 A 1 
HETATM 27 C CBC Y01 . . . D 2 98.787 109.765 98.737 1 39.51 ? CBC Y01 602 A 1 
HETATM 28 O OAW Y01 . . . D 2 99.897 109.843 97.86 1 41.78 ? OAW Y01 602 A 1 
HETATM 29 C CAY Y01 . . . D 2 100.091 108.783 96.98 1 38.25 ? CAY Y01 602 A 1 
HETATM 30 O OAG Y01 . . . D 2 99.292 108.74 96.071 1 41.67 ? OAG Y01 602 A 1 
HETATM 31 C CAM Y01 . . . D 2 101.239 107.818 97.226 1 32.37 ? CAM Y01 602 A 1 
HETATM 32 C CAL Y01 . . . D 2 101.888 107.334 95.927 1 35.28 ? CAL Y01 602 A 1 
HETATM 33 C CAX Y01 . . . D 2 101.001 106.357 95.084 1 43.75 ? CAX Y01 602 A 1 
HETATM 34 O OAH Y01 . . . D 2 100.832 105.201 95.522 1 45.93 ? OAH Y01 602 A 1 
HETATM 35 O OAF Y01 . . . D 2 100.524 106.815 94.025 1 41.83 ? OAF Y01 602 A 1 
HETATM 36 H HAA1 Y01 . . . D 2 86.235 115.049 107.683 1 36.53 ? HAA1 Y01 602 A 1 
HETATM 37 H HAA2 Y01 . . . D 2 85.493 113.482 107.839 1 36.38 ? HAA2 Y01 602 A 1 
HETATM 38 H HAA3 Y01 . . . D 2 84.933 114.613 106.648 1 36.75 ? HAA3 Y01 602 A 1 
HETATM 39 H HBA Y01 . . . D 2 86.764 114.258 105.161 1 36.22 ? HBA Y01 602 A 1 
HETATM 40 H HAB1 Y01 . . . D 2 85.396 112.1 105.547 1 35.71 ? HAB1 Y01 602 A 1 
HETATM 41 H HAB2 Y01 . . . D 2 86.71 111.502 106.551 1 35.48 ? HAB2 Y01 602 A 1 
HETATM 42 H HAB3 Y01 . . . D 2 86.955 111.814 104.85 1 35.44 ? HAB3 Y01 602 A 1 
HETATM 43 H HAN1 Y01 . . . D 2 88.458 112.959 107.386 1 35.78 ? HAN1 Y01 602 A 1 
HETATM 44 H HAN2 Y01 . . . D 2 88.444 114.684 107.141 1 35.83 ? HAN2 Y01 602 A 1 
HETATM 45 H HAJ1 Y01 . . . D 2 90.33 114.055 105.924 1 36.43 ? HAJ1 Y01 602 A 1 
HETATM 46 H HAJ2 Y01 . . . D 2 89.167 114.241 104.677 1 36.66 ? HAJ2 Y01 602 A 1 
HETATM 47 H HAO1 Y01 . . . D 2 89.245 112.035 104.017 1 35.37 ? HAO1 Y01 602 A 1 
HETATM 48 H HAO2 Y01 . . . D 2 89.095 111.412 105.611 1 35 ? HAO2 Y01 602 A 1 
HETATM 49 H HBB Y01 . . . D 2 91.773 112.423 105.558 1 36.42 ? HBB Y01 602 A 1 
HETATM 50 H HAC1 Y01 . . . D 2 91.042 109.524 104.861 1 35.3 ? HAC1 Y01 602 A 1 
HETATM 51 H HAC2 Y01 . . . D 2 90.654 110.184 106.46 1 35.23 ? HAC2 Y01 602 A 1 
HETATM 52 H HAC3 Y01 . . . D 2 92.284 110.02 105.943 1 35.49 ? HAC3 Y01 602 A 1 
HETATM 53 H HBE Y01 . . . D 2 91.128 111.082 102.884 1 36.01 ? HBE Y01 602 A 1 
HETATM 54 H HAP1 Y01 . . . D 2 90.972 113.338 102.234 1 35.58 ? HAP1 Y01 602 A 1 
HETATM 55 H HAP2 Y01 . . . D 2 91.789 113.926 103.614 1 35.54 ? HAP2 Y01 602 A 1 
HETATM 56 H HAQ1 Y01 . . . D 2 93.857 113.934 102.517 1 35.97 ? HAQ1 Y01 602 A 1 
HETATM 57 H HAQ2 Y01 . . . D 2 93.008 113.677 101.065 1 36.26 ? HAQ2 Y01 602 A 1 
HETATM 58 H HBG Y01 . . . D 2 93.093 111.3 101.174 1 36.15 ? HBG Y01 602 A 1 
HETATM 59 H HBD Y01 . . . D 2 95.787 112.045 102.5 1 36.09 ? HBD Y01 602 A 1 
HETATM 60 H HAE1 Y01 . . . D 2 93.839 111.516 105.539 1 35.61 ? HAE1 Y01 602 A 1 
HETATM 61 H HAE2 Y01 . . . D 2 94.179 112.867 104.583 1 35.66 ? HAE2 Y01 602 A 1 
HETATM 62 H HAE3 Y01 . . . D 2 95.185 111.448 104.458 1 36.07 ? HAE3 Y01 602 A 1 
HETATM 63 H HAU1 Y01 . . . D 2 92.787 109.281 102.49 1 35.49 ? HAU1 Y01 602 A 1 
HETATM 64 H HAU2 Y01 . . . D 2 93.193 109.175 104.135 1 35.39 ? HAU2 Y01 602 A 1 
HETATM 65 H HAS1 Y01 . . . D 2 94.977 108.26 102.637 1 35.93 ? HAS1 Y01 602 A 1 
HETATM 66 H HAS2 Y01 . . . D 2 95.59 109.468 103.682 1 35.09 ? HAS2 Y01 602 A 1 
HETATM 67 H HBF Y01 . . . D 2 94.986 109.675 100.696 1 36.35 ? HBF Y01 602 A 1 
HETATM 68 H HAK1 Y01 . . . D 2 95.227 113.34 100.439 1 36.54 ? HAK1 Y01 602 A 1 
HETATM 69 H HAK2 Y01 . . . D 2 94.725 111.841 99.659 1 36.43 ? HAK2 Y01 602 A 1 
HETATM 70 H HAI Y01 . . . D 2 97.069 112.927 99.162 1 36.51 ? HAI Y01 602 A 1 
HETATM 71 H HAV1 Y01 . . . D 2 99.145 111.907 99.262 1 36.6 ? HAV1 Y01 602 A 1 
HETATM 72 H HAV2 Y01 . . . D 2 99.589 110.906 100.468 1 36.08 ? HAV2 Y01 602 A 1 
HETATM 73 H HBC Y01 . . . D 2 97.871 109.888 98.106 1 36.53 ? HBC Y01 602 A 1 
HETATM 74 H HAD1 Y01 . . . D 2 98.904 109.855 102.324 1 35.39 ? HAD1 Y01 602 A 1 
HETATM 75 H HAD2 Y01 . . . D 2 97.558 110.07 103.385 1 34.46 ? HAD2 Y01 602 A 1 
HETATM 76 H HAD3 Y01 . . . D 2 98.18 111.407 102.455 1 35.91 ? HAD3 Y01 602 A 1 
HETATM 77 H HAT1 Y01 . . . D 2 96.666 108.105 100.077 1 35.96 ? HAT1 Y01 602 A 1 
HETATM 78 H HAT2 Y01 . . . D 2 97.658 107.927 101.496 1 35.67 ? HAT2 Y01 602 A 1 
HETATM 79 H HAR1 Y01 . . . D 2 98.827 107.634 99.191 1 35.09 ? HAR1 Y01 602 A 1 
HETATM 80 H HAR2 Y01 . . . D 2 99.68 108.644 100.326 1 34.83 ? HAR2 Y01 602 A 1 
HETATM 81 H HAM1 Y01 . . . D 2 100.848 106.947 97.789 1 34.77 ? HAM1 Y01 602 A 1 
HETATM 82 H HAM2 Y01 . . . D 2 102.003 108.238 97.9 1 34.79 ? HAM2 Y01 602 A 1 
HETATM 83 H HAL1 Y01 . . . D 2 102.159 108.181 95.273 1 35.55 ? HAL1 Y01 602 A 1 
HETATM 84 H HAL2 Y01 . . . D 2 102.854 106.846 96.128 1 35.4 ? HAL2 Y01 602 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           84 
#