data_8ZTH
#
_model_server_result.job_id            R8l-gQ6Qn9Jl0X2So14oPA 
_model_server_result.datetime_utc      '2025-07-05 13:27:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8zth 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":601}' 
#
_entry.id    8ZTH 
#
_exptl.entry_id    8ZTH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              114.229 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-OCTANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ZTH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 8ZTH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C8 H18' 
_chem_comp.formula_weight    114.229 
_chem_comp.id                OCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCT sing 268 n n 
C1 H11 OCT sing 269 n n 
C1 H12 OCT sing 270 n n 
C1 H13 OCT sing 271 n n 
C2 C3 OCT sing 272 n n 
C2 H21 OCT sing 273 n n 
C2 H22 OCT sing 274 n n 
C3 C4 OCT sing 275 n n 
C3 H31 OCT sing 276 n n 
C3 H32 OCT sing 277 n n 
C4 C5 OCT sing 278 n n 
C4 H41 OCT sing 279 n n 
C4 H42 OCT sing 280 n n 
C5 C6 OCT sing 281 n n 
C5 H51 OCT sing 282 n n 
C5 H52 OCT sing 283 n n 
C6 C7 OCT sing 284 n n 
C6 H61 OCT sing 285 n n 
C6 H62 OCT sing 286 n n 
C7 C8 OCT sing 287 n n 
C7 H71 OCT sing 288 n n 
C7 H72 OCT sing 289 n n 
C8 H81 OCT sing 290 n n 
C8 H82 OCT sing 291 n n 
C8 H83 OCT sing 292 n n 
#
_atom_sites.entry_id                     8ZTH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 D10 A 1 601 604 D10 D10 . 
D 3 PLM A 1 602 605 PLM PLM . 
E 4 OCT B 1 601 601 OCT OCT . 
F 5 HOH A 1 701 1 HOH HOH . 
G 5 HOH B 1 701 2 HOH HOH . 
G 5 HOH B 2 702 3 HOH HOH . 
G 5 HOH B 3 703 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCT . . . E 4 97.151 104.788 129.548 1 35.56 ? C1 OCT 601 B 1 
HETATM 2 C C2 OCT . . . E 4 95.656 104.594 129.297 1 39.51 ? C2 OCT 601 B 1 
HETATM 3 C C3 OCT . . . E 4 94.997 103.948 130.515 1 36.43 ? C3 OCT 601 B 1 
HETATM 4 C C4 OCT . . . E 4 93.729 103.201 130.108 1 40.27 ? C4 OCT 601 B 1 
HETATM 5 C C5 OCT . . . E 4 93.415 102.146 131.169 1 39.59 ? C5 OCT 601 B 1 
HETATM 6 C C6 OCT . . . E 4 91.905 101.941 131.303 1 37.38 ? C6 OCT 601 B 1 
HETATM 7 C C7 OCT . . . E 4 91.388 101.02 130.197 1 38.99 ? C7 OCT 601 B 1 
HETATM 8 C C8 OCT . . . E 4 91.152 101.799 128.902 1 34.99 ? C8 OCT 601 B 1 
HETATM 9 H H11 OCT . . . E 4 97.416 104.42 130.531 1 36.68 ? H11 OCT 601 B 1 
HETATM 10 H H12 OCT . . . E 4 97.391 105.842 129.483 1 36.4 ? H12 OCT 601 B 1 
HETATM 11 H H13 OCT . . . E 4 97.714 104.246 128.798 1 35.59 ? H13 OCT 601 B 1 
HETATM 12 H H21 OCT . . . E 4 95.197 105.556 129.111 1 36.8 ? H21 OCT 601 B 1 
HETATM 13 H H22 OCT . . . E 4 95.522 103.959 128.43 1 35.83 ? H22 OCT 601 B 1 
HETATM 14 H H31 OCT . . . E 4 95.682 103.238 130.958 1 37.03 ? H31 OCT 601 B 1 
HETATM 15 H H32 OCT . . . E 4 94.749 104.713 131.241 1 36.66 ? H32 OCT 601 B 1 
HETATM 16 H H41 OCT . . . E 4 93.881 102.713 129.154 1 36.43 ? H41 OCT 601 B 1 
HETATM 17 H H42 OCT . . . E 4 92.908 103.902 130.029 1 36.32 ? H42 OCT 601 B 1 
HETATM 18 H H51 OCT . . . E 4 93.813 102.474 132.122 1 36.92 ? H51 OCT 601 B 1 
HETATM 19 H H52 OCT . . . E 4 93.884 101.211 130.892 1 36.83 ? H52 OCT 601 B 1 
HETATM 20 H H61 OCT . . . E 4 91.399 102.897 131.253 1 36.72 ? H61 OCT 601 B 1 
HETATM 21 H H62 OCT . . . E 4 91.698 101.486 132.264 1 36.18 ? H62 OCT 601 B 1 
HETATM 22 H H71 OCT . . . E 4 92.11 100.234 130.013 1 35.97 ? H71 OCT 601 B 1 
HETATM 23 H H72 OCT . . . E 4 90.454 100.574 130.516 1 36.64 ? H72 OCT 601 B 1 
HETATM 24 H H81 OCT . . . E 4 92.031 101.725 128.273 1 35.5 ? H81 OCT 601 B 1 
HETATM 25 H H82 OCT . . . E 4 90.956 102.839 129.127 1 36.52 ? H82 OCT 601 B 1 
HETATM 26 H H83 OCT . . . E 4 90.302 101.378 128.381 1 35.79 ? H83 OCT 601 B 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           584 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#