data_8ZTH # _model_server_result.job_id OhaaVJIMviz6AKhFlyRdHQ _model_server_result.datetime_utc '2025-04-21 10:40:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8ZTH # _exptl.entry_id 8ZTH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 142.282 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ZTH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22' _chem_comp.formula_weight 142.282 _chem_comp.id D10 _chem_comp.mon_nstd_flag . _chem_comp.name DECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 D10 sing 83 n n C1 H11 D10 sing 84 n n C1 H12 D10 sing 85 n n C1 H13 D10 sing 86 n n C2 C3 D10 sing 87 n n C2 H21 D10 sing 88 n n C2 H22 D10 sing 89 n n C3 C4 D10 sing 90 n n C3 H31 D10 sing 91 n n C3 H32 D10 sing 92 n n C4 C5 D10 sing 93 n n C4 H41 D10 sing 94 n n C4 H42 D10 sing 95 n n C5 C6 D10 sing 96 n n C5 H51 D10 sing 97 n n C5 H52 D10 sing 98 n n C6 C7 D10 sing 99 n n C6 H61 D10 sing 100 n n C6 H62 D10 sing 101 n n C7 C8 D10 sing 102 n n C7 H71 D10 sing 103 n n C7 H72 D10 sing 104 n n C8 C9 D10 sing 105 n n C8 H81 D10 sing 106 n n C8 H82 D10 sing 107 n n C9 C10 D10 sing 108 n n C9 H91 D10 sing 109 n n C9 H92 D10 sing 110 n n C10 H101 D10 sing 111 n n C10 H102 D10 sing 112 n n C10 H103 D10 sing 113 n n # _atom_sites.entry_id 8ZTH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D10 A 1 601 604 D10 D10 . D 3 PLM A 1 602 605 PLM PLM . E 4 OCT B 1 601 601 OCT OCT . F 5 HOH A 1 701 1 HOH HOH . G 5 HOH B 1 701 2 HOH HOH . G 5 HOH B 2 702 3 HOH HOH . G 5 HOH B 3 703 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D10 . . . C 2 127.531 118.223 129.659 1 38.88 ? C1 D10 601 A 1 HETATM 2 C C2 D10 . . . C 2 126.768 117.053 130.235 1 39.5 ? C2 D10 601 A 1 HETATM 3 C C3 D10 . . . C 2 125.67 116.604 129.281 1 37.48 ? C3 D10 601 A 1 HETATM 4 C C4 D10 . . . C 2 124.394 116.308 130.053 1 35.35 ? C4 D10 601 A 1 HETATM 5 C C5 D10 . . . C 2 123.404 115.534 129.197 1 33.99 ? C5 D10 601 A 1 HETATM 6 C C6 D10 . . . C 2 122.781 114.41 130.006 1 33.82 ? C6 D10 601 A 1 HETATM 7 C C7 D10 . . . C 2 121.453 113.973 129.414 1 31.59 ? C7 D10 601 A 1 HETATM 8 C C8 D10 . . . C 2 120.451 113.719 130.528 1 37.59 ? C8 D10 601 A 1 HETATM 9 C C9 D10 . . . C 2 119.155 113.141 129.974 1 44.95 ? C9 D10 601 A 1 HETATM 10 C C10 D10 . . . C 2 117.956 113.86 130.55 1 39.58 ? C10 D10 601 A 1 HETATM 11 H H11 D10 . . . C 2 126.868 119.037 129.522 1 35.82 ? H11 D10 601 A 1 HETATM 12 H H12 D10 . . . C 2 127.945 117.944 128.725 1 35.15 ? H12 D10 601 A 1 HETATM 13 H H13 D10 . . . C 2 128.306 118.503 130.324 1 35.32 ? H13 D10 601 A 1 HETATM 14 H H21 D10 . . . C 2 127.452 116.224 130.421 1 36.2 ? H21 D10 601 A 1 HETATM 15 H H22 D10 . . . C 2 126.32 117.344 131.187 1 35.14 ? H22 D10 601 A 1 HETATM 16 H H31 D10 . . . C 2 125.478 117.391 128.549 1 35.22 ? H31 D10 601 A 1 HETATM 17 H H32 D10 . . . C 2 125.993 115.711 128.744 1 35.29 ? H32 D10 601 A 1 HETATM 18 H H41 D10 . . . C 2 124.637 115.725 130.943 1 34.81 ? H41 D10 601 A 1 HETATM 19 H H42 D10 . . . C 2 123.941 117.246 130.377 1 35.63 ? H42 D10 601 A 1 HETATM 20 H H51 D10 . . . C 2 123.913 115.122 128.323 1 33.83 ? H51 D10 601 A 1 HETATM 21 H H52 D10 . . . C 2 122.623 116.211 128.845 1 35.42 ? H52 D10 601 A 1 HETATM 22 H H61 D10 . . . C 2 123.466 113.56 130.036 1 36.65 ? H61 D10 601 A 1 HETATM 23 H H62 D10 . . . C 2 122.621 114.749 131.031 1 35.78 ? H62 D10 601 A 1 HETATM 24 H H71 D10 . . . C 2 121.593 113.059 128.834 1 34.99 ? H71 D10 601 A 1 HETATM 25 H H72 D10 . . . C 2 121.071 114.745 128.745 1 34.77 ? H72 D10 601 A 1 HETATM 26 H H81 D10 . . . C 2 120.883 113.023 131.251 1 37.06 ? H81 D10 601 A 1 HETATM 27 H H82 D10 . . . C 2 120.239 114.655 131.047 1 35.67 ? H82 D10 601 A 1 HETATM 28 H H91 D10 . . . C 2 119.151 113.238 128.887 1 35.44 ? H91 D10 601 A 1 HETATM 29 H H92 D10 . . . C 2 119.096 112.079 130.222 1 36.35 ? H92 D10 601 A 1 HETATM 30 H H101 D10 . . . C 2 118.022 114.892 130.323 1 34.6 ? H101 D10 601 A 1 HETATM 31 H H102 D10 . . . C 2 117.069 113.459 130.133 1 34.59 ? H102 D10 601 A 1 HETATM 32 H H103 D10 . . . C 2 117.943 113.73 131.602 1 36.14 ? H103 D10 601 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 32 #