data_8ZW1 # _model_server_result.job_id 5IxjvSbZpdYqUmCTOaHuNg _model_server_result.datetime_utc '2025-06-18 18:01:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8zw1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8ZW1 # _exptl.entry_id 8ZW1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 102.52 _cell.angle_beta 98.23 _cell.angle_gamma 118.76 _cell.entry_id 8ZW1 _cell.length_a 57.523 _cell.length_b 59.789 _cell.length_c 72.582 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ZW1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 181 n y N1A C6A COA doub 182 n y C2A N3A COA doub 183 n y C2A H2A COA sing 184 n n N3A C4A COA sing 185 n y C4A C5A COA doub 186 n y C4A N9A COA sing 187 n y C5A C6A COA sing 188 n y C5A N7A COA sing 189 n y C6A N6A COA sing 190 n n N6A H61A COA sing 191 n n N6A H62A COA sing 192 n n N7A C8A COA doub 193 n y C8A N9A COA sing 194 n y C8A H8A COA sing 195 n n N9A C1B COA sing 196 n n C1B C2B COA sing 197 n n C1B O4B COA sing 198 n n C1B H1B COA sing 199 n n C2B O2B COA sing 200 n n C2B C3B COA sing 201 n n C2B H2B COA sing 202 n n O2B HO2A COA sing 203 n n C3B O3B COA sing 204 n n C3B C4B COA sing 205 n n C3B H3B COA sing 206 n n O3B P3B COA sing 207 n n P3B O7A COA doub 208 n n P3B O8A COA sing 209 n n P3B O9A COA sing 210 n n O8A HOA8 COA sing 211 n n O9A HOA9 COA sing 212 n n C4B O4B COA sing 213 n n C4B C5B COA sing 214 n n C4B H4B COA sing 215 n n C5B O5B COA sing 216 n n C5B H51A COA sing 217 n n C5B H52A COA sing 218 n n O5B P1A COA sing 219 n n P1A O1A COA doub 220 n n P1A O2A COA sing 221 n n P1A O3A COA sing 222 n n O2A HOA2 COA sing 223 n n O3A P2A COA sing 224 n n P2A O4A COA doub 225 n n P2A O5A COA sing 226 n n P2A O6A COA sing 227 n n O5A HOA5 COA sing 228 n n O6A CCP COA sing 229 n n CBP CCP COA sing 230 n n CBP CDP COA sing 231 n n CBP CEP COA sing 232 n n CBP CAP COA sing 233 n n CCP H121 COA sing 234 n n CCP H122 COA sing 235 n n CDP H131 COA sing 236 n n CDP H132 COA sing 237 n n CDP H133 COA sing 238 n n CEP H141 COA sing 239 n n CEP H142 COA sing 240 n n CEP H143 COA sing 241 n n CAP OAP COA sing 242 n n CAP C9P COA sing 243 n n CAP H10 COA sing 244 n n OAP HO1 COA sing 245 n n C9P O9P COA doub 246 n n C9P N8P COA sing 247 n n N8P C7P COA sing 248 n n N8P HN8 COA sing 249 n n C7P C6P COA sing 250 n n C7P H71 COA sing 251 n n C7P H72 COA sing 252 n n C6P C5P COA sing 253 n n C6P H61 COA sing 254 n n C6P H62 COA sing 255 n n C5P O5P COA doub 256 n n C5P N4P COA sing 257 n n N4P C3P COA sing 258 n n N4P HN4 COA sing 259 n n C3P C2P COA sing 260 n n C3P H31 COA sing 261 n n C3P H32 COA sing 262 n n C2P S1P COA sing 263 n n C2P H21 COA sing 264 n n C2P H22 COA sing 265 n n S1P HS1 COA sing 266 n n # _atom_sites.entry_id 8ZW1 _atom_sites.fract_transf_matrix[1][1] 0.017384 _atom_sites.fract_transf_matrix[1][2] 0.00954 _atom_sites.fract_transf_matrix[1][3] 0.005989 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019078 _atom_sites.fract_transf_matrix[2][3] 0.006653 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA A 1 501 502 COA COA . D 3 CIT A 1 502 503 CIT CIT . E 4 OAA B 1 501 503 OAA OAA . F 5 ACO B 1 502 504 ACO ACO . G 6 HOH A 1 601 112 HOH HOH . G 6 HOH A 2 602 99 HOH HOH . G 6 HOH A 3 603 22 HOH HOH . G 6 HOH A 4 604 43 HOH HOH . G 6 HOH A 5 605 27 HOH HOH . G 6 HOH A 6 606 94 HOH HOH . G 6 HOH A 7 607 65 HOH HOH . G 6 HOH A 8 608 19 HOH HOH . G 6 HOH A 9 609 1 HOH HOH . G 6 HOH A 10 610 151 HOH HOH . G 6 HOH A 11 611 3 HOH HOH . G 6 HOH A 12 612 29 HOH HOH . G 6 HOH A 13 613 37 HOH HOH . G 6 HOH A 14 614 103 HOH HOH . G 6 HOH A 15 615 63 HOH HOH . G 6 HOH A 16 616 112 HOH HOH . G 6 HOH A 17 617 48 HOH HOH . G 6 HOH A 18 618 16 HOH HOH . G 6 HOH A 19 619 54 HOH HOH . G 6 HOH A 20 620 13 HOH HOH . G 6 HOH A 21 621 10 HOH HOH . G 6 HOH A 22 622 5 HOH HOH . G 6 HOH A 23 623 45 HOH HOH . G 6 HOH A 24 624 118 HOH HOH . G 6 HOH A 25 625 81 HOH HOH . G 6 HOH A 26 626 49 HOH HOH . G 6 HOH A 27 627 106 HOH HOH . G 6 HOH A 28 628 114 HOH HOH . G 6 HOH A 29 629 100 HOH HOH . G 6 HOH A 30 630 47 HOH HOH . G 6 HOH A 31 631 2 HOH HOH . G 6 HOH A 32 632 40 HOH HOH . G 6 HOH A 33 633 2 HOH HOH . G 6 HOH A 34 634 102 HOH HOH . G 6 HOH A 35 635 84 HOH HOH . G 6 HOH A 36 636 59 HOH HOH . G 6 HOH A 37 637 35 HOH HOH . G 6 HOH A 38 638 49 HOH HOH . G 6 HOH A 39 639 45 HOH HOH . G 6 HOH A 40 640 115 HOH HOH . G 6 HOH A 41 641 44 HOH HOH . G 6 HOH A 42 642 91 HOH HOH . G 6 HOH A 43 643 53 HOH HOH . G 6 HOH A 44 644 97 HOH HOH . G 6 HOH A 45 645 69 HOH HOH . G 6 HOH A 46 646 113 HOH HOH . G 6 HOH A 47 647 87 HOH HOH . G 6 HOH A 48 648 76 HOH HOH . G 6 HOH A 49 649 42 HOH HOH . G 6 HOH A 50 650 99 HOH HOH . G 6 HOH A 51 651 41 HOH HOH . G 6 HOH A 52 652 159 HOH HOH . G 6 HOH A 53 653 63 HOH HOH . G 6 HOH A 54 654 7 HOH HOH . G 6 HOH A 55 655 101 HOH HOH . G 6 HOH A 56 656 65 HOH HOH . G 6 HOH A 57 657 83 HOH HOH . G 6 HOH A 58 658 75 HOH HOH . G 6 HOH A 59 659 36 HOH HOH . G 6 HOH A 60 660 108 HOH HOH . G 6 HOH A 61 661 145 HOH HOH . G 6 HOH A 62 662 56 HOH HOH . G 6 HOH A 63 663 58 HOH HOH . G 6 HOH A 64 664 110 HOH HOH . G 6 HOH A 65 665 86 HOH HOH . G 6 HOH A 66 666 117 HOH HOH . G 6 HOH A 67 667 160 HOH HOH . G 6 HOH A 68 668 56 HOH HOH . H 6 HOH B 1 601 50 HOH HOH . H 6 HOH B 2 602 18 HOH HOH . H 6 HOH B 3 603 1 HOH HOH . H 6 HOH B 4 604 6 HOH HOH . H 6 HOH B 5 605 70 HOH HOH . H 6 HOH B 6 606 24 HOH HOH . H 6 HOH B 7 607 22 HOH HOH . H 6 HOH B 8 608 7 HOH HOH . H 6 HOH B 9 609 61 HOH HOH . H 6 HOH B 10 610 89 HOH HOH . H 6 HOH B 11 611 39 HOH HOH . H 6 HOH B 12 612 52 HOH HOH . H 6 HOH B 13 613 89 HOH HOH . H 6 HOH B 14 614 98 HOH HOH . H 6 HOH B 15 615 12 HOH HOH . H 6 HOH B 16 616 30 HOH HOH . H 6 HOH B 17 617 52 HOH HOH . H 6 HOH B 18 618 93 HOH HOH . H 6 HOH B 19 619 42 HOH HOH . H 6 HOH B 20 620 16 HOH HOH . H 6 HOH B 21 621 12 HOH HOH . H 6 HOH B 22 622 2 HOH HOH . H 6 HOH B 23 623 36 HOH HOH . H 6 HOH B 24 624 100 HOH HOH . H 6 HOH B 25 625 11 HOH HOH . H 6 HOH B 26 626 3 HOH HOH . H 6 HOH B 27 627 57 HOH HOH . H 6 HOH B 28 628 155 HOH HOH . H 6 HOH B 29 629 79 HOH HOH . H 6 HOH B 30 630 33 HOH HOH . H 6 HOH B 31 631 26 HOH HOH . H 6 HOH B 32 632 57 HOH HOH . H 6 HOH B 33 633 51 HOH HOH . H 6 HOH B 34 634 12 HOH HOH . H 6 HOH B 35 635 28 HOH HOH . H 6 HOH B 36 636 31 HOH HOH . H 6 HOH B 37 637 6 HOH HOH . H 6 HOH B 38 638 6 HOH HOH . H 6 HOH B 39 639 59 HOH HOH . H 6 HOH B 40 640 15 HOH HOH . H 6 HOH B 41 641 32 HOH HOH . H 6 HOH B 42 642 66 HOH HOH . H 6 HOH B 43 643 142 HOH HOH . H 6 HOH B 44 644 23 HOH HOH . H 6 HOH B 45 645 25 HOH HOH . H 6 HOH B 46 646 73 HOH HOH . H 6 HOH B 47 647 66 HOH HOH . H 6 HOH B 48 648 27 HOH HOH . H 6 HOH B 49 649 72 HOH HOH . H 6 HOH B 50 650 41 HOH HOH . H 6 HOH B 51 651 18 HOH HOH . H 6 HOH B 52 652 68 HOH HOH . H 6 HOH B 53 653 74 HOH HOH . H 6 HOH B 54 654 101 HOH HOH . H 6 HOH B 55 655 10 HOH HOH . H 6 HOH B 56 656 43 HOH HOH . H 6 HOH B 57 657 98 HOH HOH . H 6 HOH B 58 658 43 HOH HOH . H 6 HOH B 59 659 34 HOH HOH . H 6 HOH B 60 660 77 HOH HOH . H 6 HOH B 61 661 35 HOH HOH . H 6 HOH B 62 662 44 HOH HOH . H 6 HOH B 63 663 33 HOH HOH . H 6 HOH B 64 664 17 HOH HOH . H 6 HOH B 65 665 20 HOH HOH . H 6 HOH B 66 666 37 HOH HOH . H 6 HOH B 67 667 24 HOH HOH . H 6 HOH B 68 668 92 HOH HOH . H 6 HOH B 69 669 14 HOH HOH . H 6 HOH B 70 670 82 HOH HOH . H 6 HOH B 71 671 104 HOH HOH . H 6 HOH B 72 672 9 HOH HOH . H 6 HOH B 73 673 119 HOH HOH . H 6 HOH B 74 674 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 2 0.279 15.165 -18.18 1 73.99 ? N1A COA 501 A 1 HETATM 2 C C2A COA . . . C 2 -0.668 15.872 -17.546 1 73.34 ? C2A COA 501 A 1 HETATM 3 N N3A COA . . . C 2 -0.55 16.715 -16.523 1 69.77 ? N3A COA 501 A 1 HETATM 4 C C4A COA . . . C 2 0.731 16.81 -16.134 1 71.82 ? C4A COA 501 A 1 HETATM 5 C C5A COA . . . C 2 1.813 16.151 -16.683 1 71.45 ? C5A COA 501 A 1 HETATM 6 C C6A COA . . . C 2 1.563 15.287 -17.767 1 70.96 ? C6A COA 501 A 1 HETATM 7 N N6A COA . . . C 2 2.506 14.589 -18.393 1 72.42 ? N6A COA 501 A 1 HETATM 8 N N7A COA . . . C 2 2.977 16.506 -16.013 1 72.14 ? N7A COA 501 A 1 HETATM 9 C C8A COA . . . C 2 2.582 17.352 -15.089 1 72.48 ? C8A COA 501 A 1 HETATM 10 N N9A COA . . . C 2 1.228 17.578 -15.115 1 70.68 ? N9A COA 501 A 1 HETATM 11 C C1B COA . . . C 2 0.45 18.446 -14.229 1 71.69 ? C1B COA 501 A 1 HETATM 12 C C2B COA . . . C 2 0.504 18.052 -12.755 1 74.08 ? C2B COA 501 A 1 HETATM 13 O O2B COA . . . C 2 -0.43 17.057 -12.394 1 77.51 ? O2B COA 501 A 1 HETATM 14 C C3B COA . . . C 2 0.167 19.377 -12.074 1 70.37 ? C3B COA 501 A 1 HETATM 15 O O3B COA . . . C 2 -1.243 19.543 -11.959 1 73.75 ? O3B COA 501 A 1 HETATM 16 P P3B COA . . . C 2 -1.655 20.347 -10.615 1 79.33 ? P3B COA 501 A 1 HETATM 17 O O7A COA . . . C 2 -1.77 19.31 -9.51 1 76.82 ? O7A COA 501 A 1 HETATM 18 O O8A COA . . . C 2 -2.992 21.006 -10.925 1 79.99 ? O8A COA 501 A 1 HETATM 19 O O9A COA . . . C 2 -0.567 21.372 -10.329 1 75.12 ? O9A COA 501 A 1 HETATM 20 C C4B COA . . . C 2 0.768 20.417 -13.017 1 71.32 ? C4B COA 501 A 1 HETATM 21 O O4B COA . . . C 2 0.994 19.742 -14.284 1 69.95 ? O4B COA 501 A 1 HETATM 22 C C5B COA . . . C 2 2.062 21.025 -12.534 1 72.88 ? C5B COA 501 A 1 HETATM 23 O O5B COA . . . C 2 2.926 19.975 -12.027 1 70.82 ? O5B COA 501 A 1 HETATM 24 P P1A COA . . . C 2 4.441 19.917 -12.544 1 66.4 ? P1A COA 501 A 1 HETATM 25 O O1A COA . . . C 2 4.961 21.304 -12.717 1 68.68 ? O1A COA 501 A 1 HETATM 26 O O2A COA . . . C 2 4.54 18.981 -13.698 1 71.45 ? O2A COA 501 A 1 HETATM 27 O O3A COA . . . C 2 5.16 19.262 -11.266 1 65.62 ? O3A COA 501 A 1 HETATM 28 P P2A COA . . . C 2 5.383 17.817 -10.6 1 58 ? P2A COA 501 A 1 HETATM 29 O O4A COA . . . C 2 6.8 17.745 -10.132 1 57.85 ? O4A COA 501 A 1 HETATM 30 O O5A COA . . . C 2 4.273 17.55 -9.638 1 59.77 ? O5A COA 501 A 1 HETATM 31 O O6A COA . . . C 2 5.219 16.805 -11.833 1 54.39 ? O6A COA 501 A 1 HETATM 32 C CBP COA . . . C 2 5.787 14.535 -12.542 1 50.38 ? CBP COA 501 A 1 HETATM 33 C CCP COA . . . C 2 6.326 15.912 -12.157 1 52.82 ? CCP COA 501 A 1 HETATM 34 C CDP COA . . . C 2 6.95 13.694 -13.079 1 52.14 ? CDP COA 501 A 1 HETATM 35 C CEP COA . . . C 2 5.21 13.847 -11.297 1 50.88 ? CEP COA 501 A 1 HETATM 36 C CAP COA . . . C 2 4.703 14.684 -13.619 1 46.9 ? CAP COA 501 A 1 HETATM 37 O OAP COA . . . C 2 5.279 15.39 -14.701 1 46.8 ? OAP COA 501 A 1 HETATM 38 C C9P COA . . . C 2 4.1 13.381 -14.119 1 45.09 ? C9P COA 501 A 1 HETATM 39 O O9P COA . . . C 2 3.182 12.864 -13.489 1 45.07 ? O9P COA 501 A 1 HETATM 40 N N8P COA . . . C 2 4.587 12.864 -15.241 1 44.11 ? N8P COA 501 A 1 HETATM 41 C C7P COA . . . C 2 4.195 11.555 -15.752 1 42.78 ? C7P COA 501 A 1 HETATM 42 C C6P COA . . . C 2 4.86 10.417 -14.994 1 42.98 ? C6P COA 501 A 1 HETATM 43 C C5P COA . . . C 2 6.305 10.19 -15.402 1 45.96 ? C5P COA 501 A 1 HETATM 44 O O5P COA . . . C 2 6.6 10.002 -16.582 1 48.84 ? O5P COA 501 A 1 HETATM 45 N N4P COA . . . C 2 7.236 10.204 -14.435 1 43.57 ? N4P COA 501 A 1 HETATM 46 C C3P COA . . . C 2 8.647 9.912 -14.652 1 44.42 ? C3P COA 501 A 1 HETATM 47 C C2P COA . . . C 2 9.573 10.978 -14.089 1 46.51 ? C2P COA 501 A 1 HETATM 48 S S1P COA . . . C 2 9.687 11.029 -12.279 1 51.72 ? S1P COA 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #