data_9AU1 # _model_server_result.job_id 8KHPAs3NDL_zCV_lD_tOtg _model_server_result.datetime_utc '2024-11-01 08:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9au1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":601}' # _entry.id 9AU1 # _exptl.entry_id 9AU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9AU1 _cell.length_a 73.726 _cell.length_b 112.525 _cell.length_c 170.314 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 M CYS 22 1_555 A SG CYS 96 M CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf2 A SG CYS 154 M CYS 154 1_555 A SG CYS 210 M CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 230 M CYS 230 1_555 B SG CYS 212 N CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 B SG CYS 23 N CYS 23 1_555 B SG CYS 89 N CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf5 B SG CYS 134 N CYS 134 1_555 B SG CYS 194 N CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf7 C SG CYS 149 H CYS 149 1_555 C SG CYS 205 H CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 D SG CYS 22 L CYS 22 1_555 D SG CYS 90 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf9 D SG CYS 138 L CYS 138 1_555 D SG CYS 197 L CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf10 E SG CYS 28 R CYS 336 1_555 E SG CYS 53 R CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf11 E SG CYS 71 R CYS 379 1_555 E SG CYS 124 R CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf12 E SG CYS 83 R CYS 391 1_555 E SG CYS 217 R CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf13 E SG CYS 172 R CYS 480 1_555 E SG CYS 180 R CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 D C PCA 1 L PCA 1 1_555 D N SER 2 L SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 E ND2 ASN 35 R ASN 343 1_555 K C1 NAG . R NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 90 n n C1 C2 EDO sing 91 n n C1 H11 EDO sing 92 n n C1 H12 EDO sing 93 n n O1 HO1 EDO sing 94 n n C2 O2 EDO sing 95 n n C2 H21 EDO sing 96 n n C2 H22 EDO sing 97 n n O2 HO2 EDO sing 98 n n # _atom_sites.entry_id 9AU1 _atom_sites.fract_transf_matrix[1][1] 0.013564 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 K N 1 301 1 K K . G 7 EDO H 1 301 301 EDO EDO . H 8 ACY L 1 301 301 ACY ACT . I 9 EPE L 1 302 530 EPE EPE . J 7 EDO R 1 601 302 EDO EDO . K 10 NAG R 1 602 529 NAG NAG . L 11 HOH M 1 301 48 HOH HOH . L 11 HOH M 2 302 12 HOH HOH . L 11 HOH M 3 303 54 HOH HOH . L 11 HOH M 4 304 38 HOH HOH . L 11 HOH M 5 305 71 HOH HOH . L 11 HOH M 6 306 18 HOH HOH . L 11 HOH M 7 307 17 HOH HOH . L 11 HOH M 8 308 37 HOH HOH . L 11 HOH M 9 309 45 HOH HOH . L 11 HOH M 10 310 77 HOH HOH . L 11 HOH M 11 311 75 HOH HOH . L 11 HOH M 12 312 69 HOH HOH . L 11 HOH M 13 313 44 HOH HOH . L 11 HOH M 14 314 2 HOH HOH . L 11 HOH M 15 315 13 HOH HOH . L 11 HOH M 16 316 76 HOH HOH . L 11 HOH M 17 317 10 HOH HOH . L 11 HOH M 18 318 46 HOH HOH . L 11 HOH M 19 319 33 HOH HOH . L 11 HOH M 20 320 70 HOH HOH . L 11 HOH M 21 321 74 HOH HOH . L 11 HOH M 22 322 8 HOH HOH . L 11 HOH M 23 323 73 HOH HOH . L 11 HOH M 24 324 34 HOH HOH . L 11 HOH M 25 325 78 HOH HOH . M 11 HOH N 1 401 55 HOH HOH . M 11 HOH N 2 402 81 HOH HOH . M 11 HOH N 3 403 79 HOH HOH . M 11 HOH N 4 404 9 HOH HOH . M 11 HOH N 5 405 14 HOH HOH . M 11 HOH N 6 406 15 HOH HOH . M 11 HOH N 7 407 80 HOH HOH . M 11 HOH N 8 408 49 HOH HOH . M 11 HOH N 9 409 16 HOH HOH . M 11 HOH N 10 410 36 HOH HOH . M 11 HOH N 11 411 58 HOH HOH . M 11 HOH N 12 412 7 HOH HOH . M 11 HOH N 13 413 1 HOH HOH . M 11 HOH N 14 414 22 HOH HOH . M 11 HOH N 15 415 82 HOH HOH . N 11 HOH H 1 401 66 HOH HOH . N 11 HOH H 2 402 42 HOH HOH . N 11 HOH H 3 403 40 HOH HOH . N 11 HOH H 4 404 3 HOH HOH . N 11 HOH H 5 405 61 HOH HOH . N 11 HOH H 6 406 65 HOH HOH . N 11 HOH H 7 407 64 HOH HOH . N 11 HOH H 8 408 63 HOH HOH . N 11 HOH H 9 409 56 HOH HOH . N 11 HOH H 10 410 62 HOH HOH . N 11 HOH H 11 411 32 HOH HOH . N 11 HOH H 12 412 72 HOH HOH . O 11 HOH L 1 401 67 HOH HOH . O 11 HOH L 2 402 5 HOH HOH . O 11 HOH L 3 403 6 HOH HOH . O 11 HOH L 4 404 57 HOH HOH . O 11 HOH L 5 405 59 HOH HOH . O 11 HOH L 6 406 68 HOH HOH . O 11 HOH L 7 407 29 HOH HOH . O 11 HOH L 8 408 19 HOH HOH . O 11 HOH L 9 409 20 HOH HOH . P 11 HOH R 1 701 60 HOH HOH . P 11 HOH R 2 702 51 HOH HOH . P 11 HOH R 3 703 24 HOH HOH . P 11 HOH R 4 704 26 HOH HOH . P 11 HOH R 5 705 28 HOH HOH . P 11 HOH R 6 706 23 HOH HOH . P 11 HOH R 7 707 30 HOH HOH . P 11 HOH R 8 708 39 HOH HOH . P 11 HOH R 9 709 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 7 -8.056 -46.016 56.098 1 94.31 ? C1 EDO 601 R 1 HETATM 2 O O1 EDO . . . J 7 -7.229 -46.878 55.301 1 93.31 ? O1 EDO 601 R 1 HETATM 3 C C2 EDO . . . J 7 -7.361 -44.674 56.315 1 93.79 ? C2 EDO 601 R 1 HETATM 4 O O2 EDO . . . J 7 -8.317 -43.682 56.703 1 96.55 ? O2 EDO 601 R 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 386 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #