data_9AUD
#
_model_server_result.job_id            TOzV6gppzHoNE_x4icEwZQ 
_model_server_result.datetime_utc      '2025-03-08 23:52:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9aud 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    9AUD 
#
_exptl.entry_id    9AUD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9AUD 
_cell.length_a            196.344 
_cell.length_b            196.344 
_cell.length_c            77.104 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9AUD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    'R 3' 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 G N N 
? 6 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 109 C CYS 109 1_555 A SG CYS 165 C CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 B SG CYS 45 D CYS 12 1_555 B SG CYS 109 D CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 B SG CYS 148 D CYS 115 1_555 B SG CYS 204 D CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 C SG CYS 24 A CYS 23 1_555 C SG CYS 91 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 C SG CYS 164 A CYS 177 1_555 D SG CYS 169 B CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 D SG CYS 24 B CYS 23 1_555 D SG CYS 92 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf7 D SG CYS 143 B CYS 155 1_555 D SG CYS 208 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 120 C ASN 120 1_555 G C1 NAG . C NAG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? 
covale ? covale2 B ND2 ASN 49 D ASN 16 1_555 I C1 NAG . D NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 246 n n 
C1 O1 NAG sing 247 n n 
C1 O5 NAG sing 248 n n 
C1 H1 NAG sing 249 n n 
C2 C3 NAG sing 250 n n 
C2 N2 NAG sing 251 n n 
C2 H2 NAG sing 252 n n 
C3 C4 NAG sing 253 n n 
C3 O3 NAG sing 254 n n 
C3 H3 NAG sing 255 n n 
C4 C5 NAG sing 256 n n 
C4 O4 NAG sing 257 n n 
C4 H4 NAG sing 258 n n 
C5 C6 NAG sing 259 n n 
C5 O5 NAG sing 260 n n 
C5 H5 NAG sing 261 n n 
C6 O6 NAG sing 262 n n 
C6 H61 NAG sing 263 n n 
C6 H62 NAG sing 264 n n 
C7 C8 NAG sing 265 n n 
C7 N2 NAG sing 266 n n 
C7 O7 NAG doub 267 n n 
C8 H81 NAG sing 268 n n 
C8 H82 NAG sing 269 n n 
C8 H83 NAG sing 270 n n 
N2 HN2 NAG sing 271 n n 
O1 HO1 NAG sing 272 n n 
O3 HO3 NAG sing 273 n n 
O4 HO4 NAG sing 274 n n 
O6 HO6 NAG sing 275 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     9AUD 
_atom_sites.fract_transf_matrix[1][1]    0.005093 
_atom_sites.fract_transf_matrix[1][2]    0.002941 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005881 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012969 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 EDO C 1 201 201 EDO EDO . 
F 5 EDO C 1 202 301 EDO EDO . 
G 6 NAG C 1 203 401 NAG NAG . 
H 5 EDO C 1 204 501 EDO EDO . 
I 6 NAG D 1 301 301 NAG NAG . 
J 5 EDO D 1 302 301 EDO EDO . 
K 5 EDO B 1 401 401 EDO EDO . 
L 5 EDO B 1 402 501 EDO EDO . 
M 7 HOH C 1 301 6 HOH HOH . 
M 7 HOH C 2 302 17 HOH HOH . 
M 7 HOH C 3 303 1 HOH HOH . 
M 7 HOH C 4 304 11 HOH HOH . 
M 7 HOH C 5 305 8 HOH HOH . 
M 7 HOH C 6 306 24 HOH HOH . 
M 7 HOH C 7 307 30 HOH HOH . 
M 7 HOH C 8 308 26 HOH HOH . 
M 7 HOH C 9 309 28 HOH HOH . 
M 7 HOH C 10 310 16 HOH HOH . 
M 7 HOH C 11 311 19 HOH HOH . 
M 7 HOH C 12 312 47 HOH HOH . 
M 7 HOH C 13 313 59 HOH HOH . 
M 7 HOH C 14 314 38 HOH HOH . 
M 7 HOH C 15 315 52 HOH HOH . 
M 7 HOH C 16 316 57 HOH HOH . 
M 7 HOH C 17 317 29 HOH HOH . 
M 7 HOH C 18 318 48 HOH HOH . 
M 7 HOH C 19 319 33 HOH HOH . 
M 7 HOH C 20 320 43 HOH HOH . 
M 7 HOH C 21 321 44 HOH HOH . 
M 7 HOH C 22 322 39 HOH HOH . 
M 7 HOH C 23 323 53 HOH HOH . 
M 7 HOH C 24 324 31 HOH HOH . 
N 7 HOH D 1 401 2 HOH HOH . 
N 7 HOH D 2 402 12 HOH HOH . 
N 7 HOH D 3 403 55 HOH HOH . 
N 7 HOH D 4 404 58 HOH HOH . 
N 7 HOH D 5 405 54 HOH HOH . 
N 7 HOH D 6 406 56 HOH HOH . 
N 7 HOH D 7 407 35 HOH HOH . 
N 7 HOH D 8 408 14 HOH HOH . 
N 7 HOH D 9 409 15 HOH HOH . 
O 7 HOH A 1 301 37 HOH HOH . 
O 7 HOH A 2 302 10 HOH HOH . 
O 7 HOH A 3 303 18 HOH HOH . 
O 7 HOH A 4 304 36 HOH HOH . 
O 7 HOH A 5 305 27 HOH HOH . 
O 7 HOH A 6 306 60 HOH HOH . 
P 7 HOH B 1 501 23 HOH HOH . 
P 7 HOH B 2 502 42 HOH HOH . 
P 7 HOH B 3 503 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . I 6 47.796 23.858 32.276 1 125.35 ? C1 NAG 301 D 1 
HETATM 2 C C2 NAG . . . I 6 46.759 23.498 31.188 1 122.75 ? C2 NAG 301 D 1 
HETATM 3 C C3 NAG . . . I 6 46.219 22.075 31.382 1 124.17 ? C3 NAG 301 D 1 
HETATM 4 C C4 NAG . . . I 6 47.362 21.08 31.527 1 125.91 ? C4 NAG 301 D 1 
HETATM 5 C C5 NAG . . . I 6 48.317 21.533 32.628 1 126.7 ? C5 NAG 301 D 1 
HETATM 6 C C6 NAG . . . I 6 49.521 20.632 32.774 1 133.03 ? C6 NAG 301 D 1 
HETATM 7 C C7 NAG . . . I 6 44.738 24.837 31.948 1 130.02 ? C7 NAG 301 D 1 
HETATM 8 C C8 NAG . . . I 6 44.765 24.178 33.304 1 124.16 ? C8 NAG 301 D 1 
HETATM 9 N N2 NAG . . . I 6 45.68 24.477 31.05 1 130.83 ? N2 NAG 301 D 1 
HETATM 10 O O3 NAG . . . I 6 45.399 21.719 30.275 1 122.17 ? O3 NAG 301 D 1 
HETATM 11 O O4 NAG . . . I 6 46.848 19.794 31.855 1 127.07 ? O4 NAG 301 D 1 
HETATM 12 O O5 NAG . . . I 6 48.815 22.845 32.329 1 122.6 ? O5 NAG 301 D 1 
HETATM 13 O O6 NAG . . . I 6 50.575 21.284 33.47 1 121.98 ? O6 NAG 301 D 1 
HETATM 14 O O7 NAG . . . I 6 43.89 25.681 31.671 1 103.35 ? O7 NAG 301 D 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#