data_9AUY # _model_server_result.job_id ZGYCpymIJur6kFuiejfvQQ _model_server_result.datetime_utc '2025-01-15 15:55:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9auy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 9AUY # _exptl.entry_id 9AUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 348.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSINIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9AUY _cell.length_a 104.279 _cell.length_b 104.279 _cell.length_c 63.903 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N4 O8 P' _chem_comp.formula_weight 348.206 _chem_comp.id IMP _chem_comp.mon_nstd_flag n _chem_comp.name 'INOSINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P IMP doub 173 n n P O2P IMP sing 174 n n P O3P IMP sing 175 n n P O5' IMP sing 176 n n O2P HOP2 IMP sing 177 n n O3P HOP3 IMP sing 178 n n O5' C5' IMP sing 179 n n C5' C4' IMP sing 180 n n C5' "H5'1" IMP sing 181 n n C5' "H5'2" IMP sing 182 n n C4' O4' IMP sing 183 n n C4' C3' IMP sing 184 n n C4' H4' IMP sing 185 n n O4' C1' IMP sing 186 n n C3' O3' IMP sing 187 n n C3' C2' IMP sing 188 n n C3' H3' IMP sing 189 n n O3' HO3' IMP sing 190 n n C2' O2' IMP sing 191 n n C2' C1' IMP sing 192 n n C2' H2' IMP sing 193 n n O2' HO2' IMP sing 194 n n C1' N9 IMP sing 195 n n C1' H1' IMP sing 196 n n N9 C8 IMP sing 197 n y N9 C4 IMP sing 198 n y C8 N7 IMP doub 199 n y C8 H8 IMP sing 200 n n N7 C5 IMP sing 201 n y C5 C6 IMP sing 202 n n C5 C4 IMP doub 203 n y C6 O6 IMP doub 204 n n C6 N1 IMP sing 205 n n N1 C2 IMP sing 206 n n N1 HN1 IMP sing 207 n n C2 N3 IMP doub 208 n n C2 H2 IMP sing 209 n n N3 C4 IMP sing 210 n n # _atom_sites.entry_id 9AUY _atom_sites.fract_transf_matrix[1][1] 0.00959 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMP A 1 801 801 IMP IMP . C 3 VOA A 1 802 1 VOA DRG . D 4 HOH A 1 901 19 HOH HOH . D 4 HOH A 2 902 44 HOH HOH . D 4 HOH A 3 903 23 HOH HOH . D 4 HOH A 4 904 92 HOH HOH . D 4 HOH A 5 905 65 HOH HOH . D 4 HOH A 6 906 7 HOH HOH . D 4 HOH A 7 907 8 HOH HOH . D 4 HOH A 8 908 49 HOH HOH . D 4 HOH A 9 909 43 HOH HOH . D 4 HOH A 10 910 77 HOH HOH . D 4 HOH A 11 911 3 HOH HOH . D 4 HOH A 12 912 15 HOH HOH . D 4 HOH A 13 913 18 HOH HOH . D 4 HOH A 14 914 5 HOH HOH . D 4 HOH A 15 915 34 HOH HOH . D 4 HOH A 16 916 66 HOH HOH . D 4 HOH A 17 917 64 HOH HOH . D 4 HOH A 18 918 17 HOH HOH . D 4 HOH A 19 919 87 HOH HOH . D 4 HOH A 20 920 20 HOH HOH . D 4 HOH A 21 921 9 HOH HOH . D 4 HOH A 22 922 13 HOH HOH . D 4 HOH A 23 923 48 HOH HOH . D 4 HOH A 24 924 46 HOH HOH . D 4 HOH A 25 925 85 HOH HOH . D 4 HOH A 26 926 56 HOH HOH . D 4 HOH A 27 927 11 HOH HOH . D 4 HOH A 28 928 31 HOH HOH . D 4 HOH A 29 929 36 HOH HOH . D 4 HOH A 30 930 1 HOH HOH . D 4 HOH A 31 931 29 HOH HOH . D 4 HOH A 32 932 76 HOH HOH . D 4 HOH A 33 933 62 HOH HOH . D 4 HOH A 34 934 16 HOH HOH . D 4 HOH A 35 935 68 HOH HOH . D 4 HOH A 36 936 2 HOH HOH . D 4 HOH A 37 937 6 HOH HOH . D 4 HOH A 38 938 84 HOH HOH . D 4 HOH A 39 939 37 HOH HOH . D 4 HOH A 40 940 41 HOH HOH . D 4 HOH A 41 941 55 HOH HOH . D 4 HOH A 42 942 45 HOH HOH . D 4 HOH A 43 943 72 HOH HOH . D 4 HOH A 44 944 27 HOH HOH . D 4 HOH A 45 945 58 HOH HOH . D 4 HOH A 46 946 74 HOH HOH . D 4 HOH A 47 947 69 HOH HOH . D 4 HOH A 48 948 35 HOH HOH . D 4 HOH A 49 949 61 HOH HOH . D 4 HOH A 50 950 60 HOH HOH . D 4 HOH A 51 951 51 HOH HOH . D 4 HOH A 52 952 28 HOH HOH . D 4 HOH A 53 953 22 HOH HOH . D 4 HOH A 54 954 4 HOH HOH . D 4 HOH A 55 955 50 HOH HOH . D 4 HOH A 56 956 21 HOH HOH . D 4 HOH A 57 957 12 HOH HOH . D 4 HOH A 58 958 73 HOH HOH . D 4 HOH A 59 959 33 HOH HOH . D 4 HOH A 60 960 75 HOH HOH . D 4 HOH A 61 961 57 HOH HOH . D 4 HOH A 62 962 67 HOH HOH . D 4 HOH A 63 963 78 HOH HOH . D 4 HOH A 64 964 83 HOH HOH . D 4 HOH A 65 965 89 HOH HOH . D 4 HOH A 66 966 63 HOH HOH . D 4 HOH A 67 967 80 HOH HOH . D 4 HOH A 68 968 53 HOH HOH . D 4 HOH A 69 969 14 HOH HOH . D 4 HOH A 70 970 54 HOH HOH . D 4 HOH A 71 971 39 HOH HOH . D 4 HOH A 72 972 32 HOH HOH . D 4 HOH A 73 973 94 HOH HOH . D 4 HOH A 74 974 82 HOH HOH . D 4 HOH A 75 975 91 HOH HOH . D 4 HOH A 76 976 38 HOH HOH . D 4 HOH A 77 977 93 HOH HOH . D 4 HOH A 78 978 90 HOH HOH . D 4 HOH A 79 979 30 HOH HOH . D 4 HOH A 80 980 79 HOH HOH . D 4 HOH A 81 981 52 HOH HOH . D 4 HOH A 82 982 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P IMP . . . B 2 -21.205 7.594 -12.889 1 43.05 ? P IMP 801 A 1 HETATM 2 O O1P IMP . . . B 2 -19.828 7.213 -13.375 1 46.43 ? O1P IMP 801 A 1 HETATM 3 O O2P IMP . . . B 2 -21.522 9.046 -13.092 1 43.68 ? O2P IMP 801 A 1 HETATM 4 O O3P IMP . . . B 2 -21.388 7.161 -11.448 1 46.24 ? O3P IMP 801 A 1 HETATM 5 O O5' IMP . . . B 2 -22.254 6.735 -13.714 1 42.7 ? O5' IMP 801 A 1 HETATM 6 C C5' IMP . . . B 2 -23.674 6.787 -13.491 1 44.43 ? C5' IMP 801 A 1 HETATM 7 C C4' IMP . . . B 2 -24.392 5.987 -14.551 1 43.53 ? C4' IMP 801 A 1 HETATM 8 O O4' IMP . . . B 2 -24.176 4.575 -14.355 1 42.9 ? O4' IMP 801 A 1 HETATM 9 C C3' IMP . . . B 2 -25.908 6.106 -14.55 1 45.13 ? C3' IMP 801 A 1 HETATM 10 O O3' IMP . . . B 2 -26.333 7.345 -15.102 1 45.75 ? O3' IMP 801 A 1 HETATM 11 C C2' IMP . . . B 2 -26.331 4.863 -15.342 1 46.54 ? C2' IMP 801 A 1 HETATM 12 O O2' IMP . . . B 2 -26.333 4.995 -16.755 1 50 ? O2' IMP 801 A 1 HETATM 13 C C1' IMP . . . B 2 -25.243 3.851 -14.951 1 44.2 ? C1' IMP 801 A 1 HETATM 14 N N9 IMP . . . B 2 -25.707 2.844 -13.989 1 47.49 ? N9 IMP 801 A 1 HETATM 15 C C8 IMP . . . B 2 -26.58 3.032 -12.947 1 46.56 ? C8 IMP 801 A 1 HETATM 16 N N7 IMP . . . B 2 -26.731 1.97 -12.199 1 49.74 ? N7 IMP 801 A 1 HETATM 17 C C5 IMP . . . B 2 -25.926 1.014 -12.795 1 48.12 ? C5 IMP 801 A 1 HETATM 18 C C6 IMP . . . B 2 -25.702 -0.371 -12.466 1 49.54 ? C6 IMP 801 A 1 HETATM 19 O O6 IMP . . . B 2 -26.006 -0.947 -11.424 1 50.34 ? O6 IMP 801 A 1 HETATM 20 N N1 IMP . . . B 2 -24.923 -1.002 -13.42 1 49.87 ? N1 IMP 801 A 1 HETATM 21 C C2 IMP . . . B 2 -24.356 -0.382 -14.478 1 49.31 ? C2 IMP 801 A 1 HETATM 22 N N3 IMP . . . B 2 -24.465 0.903 -14.759 1 47.24 ? N3 IMP 801 A 1 HETATM 23 C C4 IMP . . . B 2 -25.293 1.543 -13.906 1 46.68 ? C4 IMP 801 A 1 HETATM 24 H HOP2 IMP . . . B 2 -22.25 9.393 -13.671 1 43.83 ? HOP2 IMP 801 A 1 HETATM 25 H HOP3 IMP . . . B 2 -21.601 6.197 -11.34 1 45.39 ? HOP3 IMP 801 A 1 HETATM 26 H "H5'1" IMP . . . B 2 -24.004 7.821 -13.57 1 44.79 ? "H5'1" IMP 801 A 1 HETATM 27 H "H5'2" IMP . . . B 2 -23.846 6.426 -12.478 1 45.24 ? "H5'2" IMP 801 A 1 HETATM 28 H H4' IMP . . . B 2 -23.997 6.259 -15.529 1 42.44 ? H4' IMP 801 A 1 HETATM 29 H H3' IMP . . . B 2 -26.326 6.09 -13.547 1 44.88 ? H3' IMP 801 A 1 HETATM 30 H HO3' IMP . . . B 2 -27.066 7.259 -15.765 1 45.79 ? HO3' IMP 801 A 1 HETATM 31 H H2' IMP . . . B 2 -27.328 4.545 -15.045 1 46.88 ? H2' IMP 801 A 1 HETATM 32 H HO2' IMP . . . B 2 -25.449 5.382 -16.986 1 49.61 ? HO2' IMP 801 A 1 HETATM 33 H H1' IMP . . . B 2 -24.827 3.323 -15.808 1 44.12 ? H1' IMP 801 A 1 HETATM 34 H H8 IMP . . . B 2 -27.105 3.971 -12.783 1 46.08 ? H8 IMP 801 A 1 HETATM 35 H HN1 IMP . . . B 2 -24.828 -2.01 -13.39 1 49.49 ? HN1 IMP 801 A 1 HETATM 36 H H2 IMP . . . B 2 -23.833 -0.996 -15.208 1 49.45 ? H2 IMP 801 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 36 #