data_9AXA # _model_server_result.job_id tb5a27JxmxNwFiepH68eOg _model_server_result.datetime_utc '2024-11-07 23:28:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9axa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 9AXA # _exptl.entry_id 9AXA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 488.464 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9AXA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 535 A ALA 620 1_555 A N SEP 536 A SEP 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 536 A SEP 621 1_555 A N GLU 537 A GLU 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 C C ALA 535 C ALA 620 1_555 C N SEP 536 C SEP 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 C C SEP 536 C SEP 621 1_555 C N GLU 537 C GLU 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C22 H18 F2 N4 O5 S' _chem_comp.formula_weight 488.464 _chem_comp.id A1AHE _chem_comp.mon_nstd_flag . _chem_comp.name "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 A1AHE sing 1 n n N02 S03 A1AHE sing 2 n n O05 S03 A1AHE doub 3 n n S03 O04 A1AHE doub 4 n n S03 N06 A1AHE sing 5 n n N06 C07 A1AHE sing 6 n n N08 C07 A1AHE doub 7 n y N08 C09 A1AHE sing 8 n y C15 C14 A1AHE sing 9 n n C07 C33 A1AHE sing 10 n y C09 C10 A1AHE doub 11 n y C17 C18 A1AHE doub 12 n y C17 C16 A1AHE sing 13 n y C33 F34 A1AHE sing 14 n n C33 C11 A1AHE doub 15 n y C10 C11 A1AHE sing 16 n y C18 C19 A1AHE sing 17 n y C14 C16 A1AHE sing 18 n n C14 C13 A1AHE doub 19 n n C11 C12 A1AHE sing 20 n n C16 C29 A1AHE doub 21 n y C12 C13 A1AHE sing 22 n n C23 N22 A1AHE doub 23 n y C23 C24 A1AHE sing 24 n y N22 C21 A1AHE sing 25 n y C13 C31 A1AHE sing 26 n n C19 O20 A1AHE sing 27 n n C19 C28 A1AHE doub 28 n y C24 C25 A1AHE doub 29 n y C21 O20 A1AHE sing 30 n n C21 C26 A1AHE doub 31 n y C29 C28 A1AHE sing 32 n y C29 O30 A1AHE sing 33 n n C25 C26 A1AHE sing 34 n y C26 F27 A1AHE sing 35 n n C31 O30 A1AHE sing 36 n n C31 O32 A1AHE doub 37 n n C10 H1 A1AHE sing 38 n n C15 H3 A1AHE sing 39 n n C15 H4 A1AHE sing 40 n n C15 H5 A1AHE sing 41 n n C17 H6 A1AHE sing 42 n n C18 H7 A1AHE sing 43 n n C23 H8 A1AHE sing 44 n n C24 H9 A1AHE sing 45 n n C25 H10 A1AHE sing 46 n n C28 H11 A1AHE sing 47 n n C01 H12 A1AHE sing 48 n n C01 H13 A1AHE sing 49 n n C01 H14 A1AHE sing 50 n n C09 H15 A1AHE sing 51 n n C12 H16 A1AHE sing 52 n n C12 H17 A1AHE sing 53 n n N02 H19 A1AHE sing 54 n n N06 H20 A1AHE sing 55 n n # _atom_sites.entry_id 9AXA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 A1AHE B 1 401 2 A1AHE 628 . H 4 A1AHE D 1 401 1 A1AHE 628 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1AHE . . . H 4 184.028 137.812 180.231 1 167.71 ? C10 A1AHE 401 D 1 HETATM 2 C C11 A1AHE . . . H 4 184.246 139.139 179.853 1 167.71 ? C11 A1AHE 401 D 1 HETATM 3 C C14 A1AHE . . . H 4 188.013 139.475 179.94 1 167.71 ? C14 A1AHE 401 D 1 HETATM 4 C C15 A1AHE . . . H 4 188.084 139.834 178.501 1 167.71 ? C15 A1AHE 401 D 1 HETATM 5 C C16 A1AHE . . . H 4 189.265 139.01 180.527 1 167.71 ? C16 A1AHE 401 D 1 HETATM 6 C C17 A1AHE . . . H 4 190.522 139.072 179.915 1 167.71 ? C17 A1AHE 401 D 1 HETATM 7 C C18 A1AHE . . . H 4 191.673 138.605 180.514 1 167.71 ? C18 A1AHE 401 D 1 HETATM 8 C C19 A1AHE . . . H 4 191.64 138.043 181.796 1 167.71 ? C19 A1AHE 401 D 1 HETATM 9 C C23 A1AHE . . . H 4 192.653 134.218 181.192 1 167.71 ? C23 A1AHE 401 D 1 HETATM 10 C C24 A1AHE . . . H 4 193.928 133.684 181.389 1 167.71 ? C24 A1AHE 401 D 1 HETATM 11 C C25 A1AHE . . . H 4 194.897 134.512 181.931 1 167.71 ? C25 A1AHE 401 D 1 HETATM 12 C C26 A1AHE . . . H 4 194.551 135.833 182.25 1 167.71 ? C26 A1AHE 401 D 1 HETATM 13 C C28 A1AHE . . . H 4 190.42 137.955 182.457 1 167.71 ? C28 A1AHE 401 D 1 HETATM 14 C C29 A1AHE . . . H 4 189.265 138.445 181.796 1 167.71 ? C29 A1AHE 401 D 1 HETATM 15 C C01 A1AHE . . . H 4 178.604 137.889 175.603 1 167.71 ? C01 A1AHE 401 D 1 HETATM 16 C C07 A1AHE . . . H 4 182.007 139.031 178.793 1 167.71 ? C07 A1AHE 401 D 1 HETATM 17 C C09 A1AHE . . . H 4 182.829 137.167 179.881 1 167.71 ? C09 A1AHE 401 D 1 HETATM 18 C C12 A1AHE . . . H 4 185.513 139.89 180.218 1 167.71 ? C12 A1AHE 401 D 1 HETATM 19 C C13 A1AHE . . . H 4 186.822 139.2 180.53 1 167.71 ? C13 A1AHE 401 D 1 HETATM 20 C C21 A1AHE . . . H 4 193.233 136.303 182.021 1 167.71 ? C21 A1AHE 401 D 1 HETATM 21 C C31 A1AHE . . . H 4 186.913 138.671 181.885 1 167.71 ? C31 A1AHE 401 D 1 HETATM 22 C C33 A1AHE . . . H 4 183.198 139.722 179.126 1 167.71 ? C33 A1AHE 401 D 1 HETATM 23 F F27 A1AHE . . . H 4 195.493 136.611 182.767 1 167.71 ? F27 A1AHE 401 D 1 HETATM 24 F F34 A1AHE . . . H 4 183.32 140.977 178.729 1 167.71 ? F34 A1AHE 401 D 1 HETATM 25 N N02 A1AHE . . . H 4 179.361 137.836 176.871 1 167.71 ? N02 A1AHE 401 D 1 HETATM 26 N N06 A1AHE . . . H 4 180.951 139.609 178.049 1 167.71 ? N06 A1AHE 401 D 1 HETATM 27 N N08 A1AHE . . . H 4 181.831 137.733 179.172 1 167.71 ? N08 A1AHE 401 D 1 HETATM 28 N N22 A1AHE . . . H 4 192.292 135.484 181.487 1 167.71 ? N22 A1AHE 401 D 1 HETATM 29 O O04 A1AHE . . . H 4 178.975 138.485 179.201 1 167.71 ? O04 A1AHE 401 D 1 HETATM 30 O O05 A1AHE . . . H 4 178.614 140.141 177.43 1 167.71 ? O05 A1AHE 401 D 1 HETATM 31 O O20 A1AHE . . . H 4 192.849 137.598 182.319 1 167.71 ? O20 A1AHE 401 D 1 HETATM 32 O O30 A1AHE . . . H 4 188.111 138.339 182.48 1 167.71 ? O30 A1AHE 401 D 1 HETATM 33 O O32 A1AHE . . . H 4 185.986 138.492 182.647 1 167.71 ? O32 A1AHE 401 D 1 HETATM 34 S S03 A1AHE . . . H 4 179.358 139.083 177.978 1 167.71 ? S03 A1AHE 401 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #