data_9AXH
#
_model_server_result.job_id            RdmoJZ5qO7YT_SQUupRyVg 
_model_server_result.datetime_utc      '2024-11-07 21:44:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9axh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    9AXH 
#
_exptl.entry_id    9AXH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              488.464 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.25 
_cell.angle_gamma         90 
_cell.entry_id            9AXH 
_cell.length_a            249.87 
_cell.length_b            67.08 
_cell.length_c            74.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9AXH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 160 A ASN 195 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc2 A OD2 ASP 173 A ASP 208 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc3 F O1B ANP . A ANP 402 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc4 F O1A ANP . A ANP 402 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc5 G MG MG . A MG 403 1_555 R O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? 
metalc ? metalc6 G MG MG . A MG 403 1_555 R O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? 
metalc ? metalc7 B OD1 ASN 160 B ASN 195 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc8 B OD2 ASP 173 B ASP 208 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc9 I O2B ANP . B ANP 402 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
metalc ? metalc10 I O1A ANP . B ANP 402 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc11 J MG MG . B MG 403 1_555 S O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc12 J MG MG . B MG 403 1_555 S O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? 
metalc ? metalc13 C OD1 ASN 139 C ASN 738 1_555 L MG MG . C MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc14 C OD2 ASP 151 C ASP 750 1_555 L MG MG . C MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc15 K O1B ANP . C ANP 901 1_555 L MG MG . C MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc16 K O1A ANP . C ANP 901 1_555 L MG MG . C MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc17 L MG MG . C MG 902 1_555 T O HOH . C HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc18 L MG MG . C MG 902 1_555 T O HOH . C HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc19 D OD1 ASN 139 D ASN 738 1_555 P MG MG . D MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc20 D OD2 ASP 151 D ASP 750 1_555 P MG MG . D MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc21 O O2B ANP . D ANP 901 1_555 P MG MG . D MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc22 O O1A ANP . D ANP 901 1_555 P MG MG . D MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc23 P MG MG . D MG 902 1_555 U O HOH . D HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc24 P MG MG . D MG 902 1_555 U O HOH . D HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
#
_chem_comp.formula           'C22 H18 F2 N4 O5 S' 
_chem_comp.formula_weight    488.464 
_chem_comp.id                A1AHE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 N02 A1AHE sing 1 n n 
N02 S03 A1AHE sing 2 n n 
O05 S03 A1AHE doub 3 n n 
S03 O04 A1AHE doub 4 n n 
S03 N06 A1AHE sing 5 n n 
N06 C07 A1AHE sing 6 n n 
N08 C07 A1AHE doub 7 n y 
N08 C09 A1AHE sing 8 n y 
C15 C14 A1AHE sing 9 n n 
C07 C33 A1AHE sing 10 n y 
C09 C10 A1AHE doub 11 n y 
C17 C18 A1AHE doub 12 n y 
C17 C16 A1AHE sing 13 n y 
C33 F34 A1AHE sing 14 n n 
C33 C11 A1AHE doub 15 n y 
C10 C11 A1AHE sing 16 n y 
C18 C19 A1AHE sing 17 n y 
C14 C16 A1AHE sing 18 n n 
C14 C13 A1AHE doub 19 n n 
C11 C12 A1AHE sing 20 n n 
C16 C29 A1AHE doub 21 n y 
C12 C13 A1AHE sing 22 n n 
C23 N22 A1AHE doub 23 n y 
C23 C24 A1AHE sing 24 n y 
N22 C21 A1AHE sing 25 n y 
C13 C31 A1AHE sing 26 n n 
C19 O20 A1AHE sing 27 n n 
C19 C28 A1AHE doub 28 n y 
C24 C25 A1AHE doub 29 n y 
C21 O20 A1AHE sing 30 n n 
C21 C26 A1AHE doub 31 n y 
C29 C28 A1AHE sing 32 n y 
C29 O30 A1AHE sing 33 n n 
C25 C26 A1AHE sing 34 n y 
C26 F27 A1AHE sing 35 n n 
C31 O30 A1AHE sing 36 n n 
C31 O32 A1AHE doub 37 n n 
C10 H1 A1AHE sing 38 n n 
C15 H3 A1AHE sing 39 n n 
C15 H4 A1AHE sing 40 n n 
C15 H5 A1AHE sing 41 n n 
C17 H6 A1AHE sing 42 n n 
C18 H7 A1AHE sing 43 n n 
C23 H8 A1AHE sing 44 n n 
C24 H9 A1AHE sing 45 n n 
C25 H10 A1AHE sing 46 n n 
C28 H11 A1AHE sing 47 n n 
C01 H12 A1AHE sing 48 n n 
C01 H13 A1AHE sing 49 n n 
C01 H14 A1AHE sing 50 n n 
C09 H15 A1AHE sing 51 n n 
C12 H16 A1AHE sing 52 n n 
C12 H17 A1AHE sing 53 n n 
N02 H19 A1AHE sing 54 n n 
N06 H20 A1AHE sing 55 n n 
#
_atom_sites.entry_id                     9AXH 
_atom_sites.fract_transf_matrix[1][1]    0.004002 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000017 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013441 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 A1AHE A 1 401 401 A1AHE 628 . 
F 4 ANP A 1 402 1 ANP ANP . 
G 5 MG A 1 403 1 MG MG . 
H 3 A1AHE B 1 401 401 A1AHE 628 . 
I 4 ANP B 1 402 2 ANP ANP . 
J 5 MG B 1 403 2 MG MG . 
K 4 ANP C 1 901 3 ANP ANP . 
L 5 MG C 1 902 3 MG MG . 
M 6 EDO C 1 903 1 EDO EDO . 
N 7 CL C 1 904 1 CL CL . 
O 4 ANP D 1 901 4 ANP ANP . 
P 5 MG D 1 902 4 MG MG . 
Q 7 CL D 1 903 2 CL CL . 
R 8 HOH A 1 501 10 HOH HOH . 
R 8 HOH A 2 502 9 HOH HOH . 
S 8 HOH B 1 501 4 HOH HOH . 
S 8 HOH B 2 502 3 HOH HOH . 
S 8 HOH B 3 503 5 HOH HOH . 
S 8 HOH B 4 504 6 HOH HOH . 
T 8 HOH C 1 1001 2 HOH HOH . 
T 8 HOH C 2 1002 1 HOH HOH . 
U 8 HOH D 1 1001 7 HOH HOH . 
U 8 HOH D 2 1002 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 A1AHE . . . H 3 25.889 11.43 9.525 1 74.63 ? C10 A1AHE 401 B 1 
HETATM 2 C C11 A1AHE . . . H 3 26.713 11.226 8.406 1 71.12 ? C11 A1AHE 401 B 1 
HETATM 3 C C14 A1AHE . . . H 3 23.942 10.662 6.611 1 73.36 ? C14 A1AHE 401 B 1 
HETATM 4 C C15 A1AHE . . . H 3 24.201 12.094 6.299 1 68.5 ? C15 A1AHE 401 B 1 
HETATM 5 C C16 A1AHE . . . H 3 22.546 10.2 6.5 1 73.59 ? C16 A1AHE 401 B 1 
HETATM 6 C C17 A1AHE . . . H 3 21.478 10.889 5.859 1 71.24 ? C17 A1AHE 401 B 1 
HETATM 7 C C18 A1AHE . . . H 3 20.19 10.379 5.799 1 71.4 ? C18 A1AHE 401 B 1 
HETATM 8 C C19 A1AHE . . . H 3 19.883 9.137 6.38 1 72.49 ? C19 A1AHE 401 B 1 
HETATM 9 C C23 A1AHE . . . H 3 17.471 9.607 9.467 1 68.88 ? C23 A1AHE 401 B 1 
HETATM 10 C C24 A1AHE . . . H 3 16.204 9.033 9.593 1 68.29 ? C24 A1AHE 401 B 1 
HETATM 11 C C25 A1AHE . . . H 3 15.713 8.293 8.527 1 68.07 ? C25 A1AHE 401 B 1 
HETATM 12 C C26 A1AHE . . . H 3 16.524 8.172 7.392 1 67.74 ? C26 A1AHE 401 B 1 
HETATM 13 C C28 A1AHE . . . H 3 20.886 8.423 7.017 1 75.42 ? C28 A1AHE 401 B 1 
HETATM 14 C C29 A1AHE . . . H 3 22.196 8.971 7.063 1 66.49 ? C29 A1AHE 401 B 1 
HETATM 15 C C01 A1AHE . . . H 3 28.363 16.737 10.423 1 69.43 ? C01 A1AHE 401 B 1 
HETATM 16 C C07 A1AHE . . . H 3 28.16 12.977 9.349 1 72.95 ? C07 A1AHE 401 B 1 
HETATM 17 C C09 A1AHE . . . H 3 26.235 12.38 10.495 1 70.76 ? C09 A1AHE 401 B 1 
HETATM 18 C C12 A1AHE . . . H 3 26.35 10.215 7.36 1 69.16 ? C12 A1AHE 401 B 1 
HETATM 19 C C13 A1AHE . . . H 3 24.9 9.874 7.168 1 79.54 ? C13 A1AHE 401 B 1 
HETATM 20 C C21 A1AHE . . . H 3 17.791 8.786 7.356 1 64.21 ? C21 A1AHE 401 B 1 
HETATM 21 C C31 A1AHE . . . H 3 24.442 8.646 7.812 1 77.24 ? C31 A1AHE 401 B 1 
HETATM 22 C C33 A1AHE . . . H 3 27.852 12.032 8.348 1 74.07 ? C33 A1AHE 401 B 1 
HETATM 23 F F27 A1AHE . . . H 3 16.068 7.466 6.361 1 71.56 ? F27 A1AHE 401 B 1 
HETATM 24 F F34 A1AHE . . . H 3 28.687 11.907 7.317 1 81.26 ? F34 A1AHE 401 B 1 
HETATM 25 N N02 A1AHE . . . H 3 28.844 15.584 11.234 1 82 ? N02 A1AHE 401 B 1 
HETATM 26 N N06 A1AHE . . . H 3 29.296 13.797 9.318 1 73.58 ? N06 A1AHE 401 B 1 
HETATM 27 N N08 A1AHE . . . H 3 27.336 13.146 10.437 1 76.26 ? N08 A1AHE 401 B 1 
HETATM 28 N N22 A1AHE . . . H 3 18.261 9.501 8.385 1 65.83 ? N22 A1AHE 401 B 1 
HETATM 29 O O04 A1AHE . . . H 3 30.051 13.487 11.656 1 77.28 ? O04 A1AHE 401 B 1 
HETATM 30 O O05 A1AHE . . . H 3 31.101 15.211 10.233 1 81.87 ? O05 A1AHE 401 B 1 
HETATM 31 O O20 A1AHE . . . H 3 18.584 8.689 6.273 1 69.86 ? O20 A1AHE 401 B 1 
HETATM 32 O O30 A1AHE . . . H 3 23.129 8.214 7.706 1 67.98 ? O30 A1AHE 401 B 1 
HETATM 33 O O32 A1AHE . . . H 3 25.118 7.885 8.487 1 70.22 ? O32 A1AHE 401 B 1 
HETATM 34 S S03 A1AHE . . . H 3 29.972 14.479 10.655 1 75.59 ? S03 A1AHE 401 B 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           34 
#