data_9AXO
#
_model_server_result.job_id            FjiiMX5woFHkna6cm3NU-g 
_model_server_result.datetime_utc      '2025-01-12 00:57:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9axo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":306}' 
#
_entry.id    9AXO 
#
_exptl.entry_id    9AXO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9AXO 
_cell.length_a            60.519 
_cell.length_b            60.519 
_cell.length_c            259.857 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9AXO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 147 H CYS 140 1_555 A SG CYS 203 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
covale ? covale1 A C PCA 1 H PCA 1 1_555 A N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 184 n n 
C1 C2 GOL sing 185 n n 
C1 H11 GOL sing 186 n n 
C1 H12 GOL sing 187 n n 
O1 HO1 GOL sing 188 n n 
C2 O2 GOL sing 189 n n 
C2 C3 GOL sing 190 n n 
C2 H2 GOL sing 191 n n 
O2 HO2 GOL sing 192 n n 
C3 O3 GOL sing 193 n n 
C3 H31 GOL sing 194 n n 
C3 H32 GOL sing 195 n n 
O3 HO3 GOL sing 196 n n 
#
_atom_sites.entry_id                     9AXO 
_atom_sites.fract_transf_matrix[1][1]    0.016524 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016524 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003848 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL H 1 301 1 GOL GOL . 
D 3 GOL H 1 302 3 GOL GOL . 
E 3 GOL H 1 303 4 GOL GOL . 
F 3 GOL H 1 304 7 GOL GOL . 
G 3 GOL H 1 305 8 GOL GOL . 
H 3 GOL H 1 306 11 GOL GOL . 
I 3 GOL H 1 307 13 GOL GOL . 
J 3 GOL H 1 308 16 GOL GOL . 
K 3 GOL H 1 309 18 GOL GOL . 
L 3 GOL H 1 310 22 GOL GOL . 
M 4 7V7 L 1 301 301 7V7 7V7 . 
N 3 GOL L 1 302 9 GOL GOL . 
O 3 GOL L 1 303 10 GOL GOL . 
P 3 GOL L 1 304 19 GOL GOL . 
Q 3 GOL L 1 305 23 GOL GOL . 
R 5 HOH H 1 401 123 HOH HOH . 
R 5 HOH H 2 402 97 HOH HOH . 
R 5 HOH H 3 403 74 HOH HOH . 
R 5 HOH H 4 404 25 HOH HOH . 
R 5 HOH H 5 405 85 HOH HOH . 
R 5 HOH H 6 406 21 HOH HOH . 
R 5 HOH H 7 407 86 HOH HOH . 
R 5 HOH H 8 408 7 HOH HOH . 
R 5 HOH H 9 409 98 HOH HOH . 
R 5 HOH H 10 410 101 HOH HOH . 
R 5 HOH H 11 411 1 HOH HOH . 
R 5 HOH H 12 412 36 HOH HOH . 
R 5 HOH H 13 413 2 HOH HOH . 
R 5 HOH H 14 414 100 HOH HOH . 
R 5 HOH H 15 415 70 HOH HOH . 
R 5 HOH H 16 416 54 HOH HOH . 
R 5 HOH H 17 417 89 HOH HOH . 
R 5 HOH H 18 418 72 HOH HOH . 
R 5 HOH H 19 419 5 HOH HOH . 
R 5 HOH H 20 420 31 HOH HOH . 
R 5 HOH H 21 421 94 HOH HOH . 
R 5 HOH H 22 422 34 HOH HOH . 
R 5 HOH H 23 423 51 HOH HOH . 
R 5 HOH H 24 424 26 HOH HOH . 
R 5 HOH H 25 425 95 HOH HOH . 
R 5 HOH H 26 426 113 HOH HOH . 
R 5 HOH H 27 427 39 HOH HOH . 
R 5 HOH H 28 428 27 HOH HOH . 
R 5 HOH H 29 429 102 HOH HOH . 
R 5 HOH H 30 430 24 HOH HOH . 
R 5 HOH H 31 431 75 HOH HOH . 
R 5 HOH H 32 432 114 HOH HOH . 
R 5 HOH H 33 433 58 HOH HOH . 
R 5 HOH H 34 434 57 HOH HOH . 
R 5 HOH H 35 435 56 HOH HOH . 
R 5 HOH H 36 436 59 HOH HOH . 
R 5 HOH H 37 437 9 HOH HOH . 
R 5 HOH H 38 438 10 HOH HOH . 
R 5 HOH H 39 439 43 HOH HOH . 
R 5 HOH H 40 440 45 HOH HOH . 
R 5 HOH H 41 441 15 HOH HOH . 
R 5 HOH H 42 442 8 HOH HOH . 
R 5 HOH H 43 443 22 HOH HOH . 
R 5 HOH H 44 444 65 HOH HOH . 
R 5 HOH H 45 445 96 HOH HOH . 
R 5 HOH H 46 446 104 HOH HOH . 
R 5 HOH H 47 447 92 HOH HOH . 
R 5 HOH H 48 448 103 HOH HOH . 
R 5 HOH H 49 449 32 HOH HOH . 
R 5 HOH H 50 450 41 HOH HOH . 
R 5 HOH H 51 451 129 HOH HOH . 
R 5 HOH H 52 452 14 HOH HOH . 
R 5 HOH H 53 453 109 HOH HOH . 
R 5 HOH H 54 454 90 HOH HOH . 
R 5 HOH H 55 455 76 HOH HOH . 
R 5 HOH H 56 456 52 HOH HOH . 
R 5 HOH H 57 457 23 HOH HOH . 
R 5 HOH H 58 458 121 HOH HOH . 
R 5 HOH H 59 459 42 HOH HOH . 
R 5 HOH H 60 460 63 HOH HOH . 
R 5 HOH H 61 461 48 HOH HOH . 
R 5 HOH H 62 462 29 HOH HOH . 
R 5 HOH H 63 463 61 HOH HOH . 
R 5 HOH H 64 464 125 HOH HOH . 
R 5 HOH H 65 465 120 HOH HOH . 
R 5 HOH H 66 466 33 HOH HOH . 
R 5 HOH H 67 467 11 HOH HOH . 
R 5 HOH H 68 468 50 HOH HOH . 
R 5 HOH H 69 469 62 HOH HOH . 
R 5 HOH H 70 470 105 HOH HOH . 
R 5 HOH H 71 471 83 HOH HOH . 
R 5 HOH H 72 472 128 HOH HOH . 
R 5 HOH H 73 473 4 HOH HOH . 
R 5 HOH H 74 474 30 HOH HOH . 
R 5 HOH H 75 475 84 HOH HOH . 
R 5 HOH H 76 476 12 HOH HOH . 
R 5 HOH H 77 477 91 HOH HOH . 
R 5 HOH H 78 478 112 HOH HOH . 
S 5 HOH L 1 401 118 HOH HOH . 
S 5 HOH L 2 402 119 HOH HOH . 
S 5 HOH L 3 403 87 HOH HOH . 
S 5 HOH L 4 404 80 HOH HOH . 
S 5 HOH L 5 405 77 HOH HOH . 
S 5 HOH L 6 406 110 HOH HOH . 
S 5 HOH L 7 407 35 HOH HOH . 
S 5 HOH L 8 408 47 HOH HOH . 
S 5 HOH L 9 409 28 HOH HOH . 
S 5 HOH L 10 410 16 HOH HOH . 
S 5 HOH L 11 411 3 HOH HOH . 
S 5 HOH L 12 412 69 HOH HOH . 
S 5 HOH L 13 413 17 HOH HOH . 
S 5 HOH L 14 414 64 HOH HOH . 
S 5 HOH L 15 415 38 HOH HOH . 
S 5 HOH L 16 416 67 HOH HOH . 
S 5 HOH L 17 417 126 HOH HOH . 
S 5 HOH L 18 418 117 HOH HOH . 
S 5 HOH L 19 419 71 HOH HOH . 
S 5 HOH L 20 420 111 HOH HOH . 
S 5 HOH L 21 421 124 HOH HOH . 
S 5 HOH L 22 422 106 HOH HOH . 
S 5 HOH L 23 423 116 HOH HOH . 
S 5 HOH L 24 424 81 HOH HOH . 
S 5 HOH L 25 425 55 HOH HOH . 
S 5 HOH L 26 426 46 HOH HOH . 
S 5 HOH L 27 427 6 HOH HOH . 
S 5 HOH L 28 428 53 HOH HOH . 
S 5 HOH L 29 429 66 HOH HOH . 
S 5 HOH L 30 430 79 HOH HOH . 
S 5 HOH L 31 431 108 HOH HOH . 
S 5 HOH L 32 432 44 HOH HOH . 
S 5 HOH L 33 433 20 HOH HOH . 
S 5 HOH L 34 434 107 HOH HOH . 
S 5 HOH L 35 435 37 HOH HOH . 
S 5 HOH L 36 436 93 HOH HOH . 
S 5 HOH L 37 437 88 HOH HOH . 
S 5 HOH L 38 438 99 HOH HOH . 
S 5 HOH L 39 439 40 HOH HOH . 
S 5 HOH L 40 440 18 HOH HOH . 
S 5 HOH L 41 441 127 HOH HOH . 
S 5 HOH L 42 442 122 HOH HOH . 
S 5 HOH L 43 443 82 HOH HOH . 
S 5 HOH L 44 444 49 HOH HOH . 
S 5 HOH L 45 445 73 HOH HOH . 
S 5 HOH L 46 446 131 HOH HOH . 
S 5 HOH L 47 447 130 HOH HOH . 
S 5 HOH L 48 448 115 HOH HOH . 
S 5 HOH L 49 449 68 HOH HOH . 
S 5 HOH L 50 450 60 HOH HOH . 
S 5 HOH L 51 451 13 HOH HOH . 
S 5 HOH L 52 452 78 HOH HOH . 
S 5 HOH L 53 453 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -33.607 5.91 -47.065 1 66.78 ? C1 GOL 306 H 1 
HETATM 2 O O1 GOL . . . H 3 -34.851 5.482 -46.616 1 75.33 ? O1 GOL 306 H 1 
HETATM 3 C C2 GOL . . . H 3 -33.768 7.401 -47.461 1 62.16 ? C2 GOL 306 H 1 
HETATM 4 O O2 GOL . . . H 3 -34.319 8.149 -46.437 1 64.28 ? O2 GOL 306 H 1 
HETATM 5 C C3 GOL . . . H 3 -32.357 7.911 -47.842 1 61.65 ? C3 GOL 306 H 1 
HETATM 6 O O3 GOL . . . H 3 -32.474 9.262 -48.158 1 63.51 ? O3 GOL 306 H 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           353 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#