data_9AYA # _model_server_result.job_id XvYFCppSNkslWdmgT58_yw _model_server_result.datetime_utc '2024-11-05 00:38:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9aya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 9AYA # _exptl.entry_id 9AYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 488.464 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.59 _cell.angle_gamma 90 _cell.entry_id 9AYA _cell.length_a 149.725 _cell.length_b 58.202 _cell.length_c 162.347 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 74.8625 29.101 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASN 160 B ASN 195 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 B OD2 ASP 173 B ASP 208 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc3 F O1B ANP . B ANP 402 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc4 F O2A ANP . B ANP 402 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc5 G MG MG . B MG 403 1_555 L O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc6 D OD1 ASN 160 D ASN 195 1_555 J MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc7 D OD2 ASP 173 D ASP 208 1_555 J MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc8 I O1B ANP . D ANP 402 1_555 J MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc9 I O2A ANP . D ANP 402 1_555 J MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc10 J MG MG . D MG 403 1_555 N O HOH . D HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc11 J MG MG . D MG 403 1_555 N O HOH . D HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? # _chem_comp.formula 'C22 H18 F2 N4 O5 S' _chem_comp.formula_weight 488.464 _chem_comp.id A1AHE _chem_comp.mon_nstd_flag . _chem_comp.name "N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 A1AHE sing 1 n n N02 S03 A1AHE sing 2 n n O05 S03 A1AHE doub 3 n n S03 O04 A1AHE doub 4 n n S03 N06 A1AHE sing 5 n n N06 C07 A1AHE sing 6 n n N08 C07 A1AHE doub 7 n y N08 C09 A1AHE sing 8 n y C15 C14 A1AHE sing 9 n n C07 C33 A1AHE sing 10 n y C09 C10 A1AHE doub 11 n y C17 C18 A1AHE doub 12 n y C17 C16 A1AHE sing 13 n y C33 F34 A1AHE sing 14 n n C33 C11 A1AHE doub 15 n y C10 C11 A1AHE sing 16 n y C18 C19 A1AHE sing 17 n y C14 C16 A1AHE sing 18 n n C14 C13 A1AHE doub 19 n n C11 C12 A1AHE sing 20 n n C16 C29 A1AHE doub 21 n y C12 C13 A1AHE sing 22 n n C23 N22 A1AHE doub 23 n y C23 C24 A1AHE sing 24 n y N22 C21 A1AHE sing 25 n y C13 C31 A1AHE sing 26 n n C19 O20 A1AHE sing 27 n n C19 C28 A1AHE doub 28 n y C24 C25 A1AHE doub 29 n y C21 O20 A1AHE sing 30 n n C21 C26 A1AHE doub 31 n y C29 C28 A1AHE sing 32 n y C29 O30 A1AHE sing 33 n n C25 C26 A1AHE sing 34 n y C26 F27 A1AHE sing 35 n n C31 O30 A1AHE sing 36 n n C31 O32 A1AHE doub 37 n n C10 H1 A1AHE sing 38 n n C15 H3 A1AHE sing 39 n n C15 H4 A1AHE sing 40 n n C15 H5 A1AHE sing 41 n n C17 H6 A1AHE sing 42 n n C18 H7 A1AHE sing 43 n n C23 H8 A1AHE sing 44 n n C24 H9 A1AHE sing 45 n n C25 H10 A1AHE sing 46 n n C28 H11 A1AHE sing 47 n n C01 H12 A1AHE sing 48 n n C01 H13 A1AHE sing 49 n n C01 H14 A1AHE sing 50 n n C09 H15 A1AHE sing 51 n n C12 H16 A1AHE sing 52 n n C12 H17 A1AHE sing 53 n n N02 H19 A1AHE sing 54 n n N06 H20 A1AHE sing 55 n n # _atom_sites.entry_id 9AYA _atom_sites.fract_transf_matrix[1][1] 0.006679 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000654 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006189 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 A1AHE B 1 401 401 A1AHE 628 . F 4 ANP B 1 402 1 ANP ANP . G 5 MG B 1 403 1 MG MG . H 3 A1AHE D 1 401 401 A1AHE 628 . I 4 ANP D 1 402 2 ANP ANP . J 5 MG D 1 403 2 MG MG . K 6 HOH A 1 701 7 HOH HOH . K 6 HOH A 2 702 49 HOH HOH . K 6 HOH A 3 703 11 HOH HOH . K 6 HOH A 4 704 13 HOH HOH . K 6 HOH A 5 705 35 HOH HOH . K 6 HOH A 6 706 28 HOH HOH . K 6 HOH A 7 707 21 HOH HOH . K 6 HOH A 8 708 47 HOH HOH . K 6 HOH A 9 709 45 HOH HOH . K 6 HOH A 10 710 43 HOH HOH . K 6 HOH A 11 711 37 HOH HOH . K 6 HOH A 12 712 27 HOH HOH . K 6 HOH A 13 713 38 HOH HOH . L 6 HOH B 1 501 14 HOH HOH . L 6 HOH B 2 502 1 HOH HOH . L 6 HOH B 3 503 17 HOH HOH . L 6 HOH B 4 504 19 HOH HOH . L 6 HOH B 5 505 20 HOH HOH . L 6 HOH B 6 506 18 HOH HOH . L 6 HOH B 7 507 8 HOH HOH . L 6 HOH B 8 508 9 HOH HOH . L 6 HOH B 9 509 24 HOH HOH . M 6 HOH C 1 701 31 HOH HOH . M 6 HOH C 2 702 10 HOH HOH . M 6 HOH C 3 703 29 HOH HOH . M 6 HOH C 4 704 12 HOH HOH . M 6 HOH C 5 705 34 HOH HOH . M 6 HOH C 6 706 30 HOH HOH . M 6 HOH C 7 707 22 HOH HOH . M 6 HOH C 8 708 33 HOH HOH . M 6 HOH C 9 709 44 HOH HOH . M 6 HOH C 10 710 32 HOH HOH . M 6 HOH C 11 711 48 HOH HOH . M 6 HOH C 12 712 36 HOH HOH . N 6 HOH D 1 501 6 HOH HOH . N 6 HOH D 2 502 2 HOH HOH . N 6 HOH D 3 503 3 HOH HOH . N 6 HOH D 4 504 15 HOH HOH . N 6 HOH D 5 505 42 HOH HOH . N 6 HOH D 6 506 25 HOH HOH . N 6 HOH D 7 507 23 HOH HOH . N 6 HOH D 8 508 16 HOH HOH . N 6 HOH D 9 509 41 HOH HOH . N 6 HOH D 10 510 5 HOH HOH . N 6 HOH D 11 511 46 HOH HOH . N 6 HOH D 12 512 40 HOH HOH . N 6 HOH D 13 513 39 HOH HOH . N 6 HOH D 14 514 4 HOH HOH . N 6 HOH D 15 515 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1AHE . . . H 3 -36.253 -11.592 11.02 1 34.23 ? C10 A1AHE 401 D 1 HETATM 2 C C11 A1AHE . . . H 3 -37.528 -11.881 11.522 1 36.27 ? C11 A1AHE 401 D 1 HETATM 3 C C14 A1AHE . . . H 3 -36.279 -14.924 12.149 1 37.82 ? C14 A1AHE 401 D 1 HETATM 4 C C15 A1AHE . . . H 3 -36.254 -14.424 13.545 1 29.58 ? C15 A1AHE 401 D 1 HETATM 5 C C16 A1AHE . . . H 3 -35.361 -16.016 11.82 1 40.9 ? C16 A1AHE 401 D 1 HETATM 6 C C17 A1AHE . . . H 3 -34.439 -16.606 12.704 1 34.2 ? C17 A1AHE 401 D 1 HETATM 7 C C18 A1AHE . . . H 3 -33.604 -17.638 12.33 1 38.9 ? C18 A1AHE 401 D 1 HETATM 8 C C19 A1AHE . . . H 3 -33.631 -18.147 11.028 1 37.8 ? C19 A1AHE 401 D 1 HETATM 9 C C23 A1AHE . . . H 3 -30.118 -17.399 9.229 1 40.36 ? C23 A1AHE 401 D 1 HETATM 10 C C24 A1AHE . . . H 3 -29.205 -18.389 8.852 1 38.64 ? C24 A1AHE 401 D 1 HETATM 11 C C25 A1AHE . . . H 3 -29.523 -19.705 9.127 1 35.54 ? C25 A1AHE 401 D 1 HETATM 12 C C26 A1AHE . . . H 3 -30.741 -19.965 9.768 1 37.66 ? C26 A1AHE 401 D 1 HETATM 13 C C28 A1AHE . . . H 3 -34.516 -17.61 10.101 1 40.31 ? C28 A1AHE 401 D 1 HETATM 14 C C29 A1AHE . . . H 3 -35.363 -16.554 10.523 1 37.31 ? C29 A1AHE 401 D 1 HETATM 15 C C01 A1AHE . . . H 3 -36.057 -6.825 14.336 1 36.93 ? C01 A1AHE 401 D 1 HETATM 16 C C07 A1AHE . . . H 3 -37.622 -9.507 12.192 1 29.98 ? C07 A1AHE 401 D 1 HETATM 17 C C09 A1AHE . . . H 3 -35.737 -10.295 11.122 1 33.54 ? C09 A1AHE 401 D 1 HETATM 18 C C12 A1AHE . . . H 3 -38.108 -13.28 11.408 1 36.48 ? C12 A1AHE 401 D 1 HETATM 19 C C13 A1AHE . . . H 3 -37.183 -14.466 11.239 1 40.48 ? C13 A1AHE 401 D 1 HETATM 20 C C21 A1AHE . . . H 3 -31.604 -18.919 10.116 1 43.05 ? C21 A1AHE 401 D 1 HETATM 21 C C31 A1AHE . . . H 3 -37.048 -14.994 9.881 1 46.39 ? C31 A1AHE 401 D 1 HETATM 22 C C33 A1AHE . . . H 3 -38.19 -10.79 12.115 1 34.76 ? C33 A1AHE 401 D 1 HETATM 23 F F27 A1AHE . . . H 3 -31.06 -21.226 10.042 1 44.53 ? F27 A1AHE 401 D 1 HETATM 24 F F34 A1AHE . . . H 3 -39.397 -10.951 12.621 1 45.71 ? F34 A1AHE 401 D 1 HETATM 25 N N02 A1AHE . . . H 3 -36.416 -6.537 12.926 1 40.76 ? N02 A1AHE 401 D 1 HETATM 26 N N06 A1AHE . . . H 3 -38.266 -8.404 12.768 1 38.56 ? N06 A1AHE 401 D 1 HETATM 27 N N08 A1AHE . . . H 3 -36.384 -9.261 11.688 1 31.9 ? N08 A1AHE 401 D 1 HETATM 28 N N22 A1AHE . . . H 3 -31.296 -17.628 9.85 1 45.29 ? N22 A1AHE 401 D 1 HETATM 29 O O04 A1AHE . . . H 3 -37.835 -6.729 10.938 1 42.29 ? O04 A1AHE 401 D 1 HETATM 30 O O05 A1AHE . . . H 3 -38.832 -5.989 13.063 1 45.06 ? O05 A1AHE 401 D 1 HETATM 31 O O20 A1AHE . . . H 3 -32.775 -19.183 10.748 1 45.98 ? O20 A1AHE 401 D 1 HETATM 32 O O30 A1AHE . . . H 3 -36.202 -16.064 9.582 1 36.9 ? O30 A1AHE 401 D 1 HETATM 33 O O32 A1AHE . . . H 3 -37.62 -14.587 8.881 1 44.05 ? O32 A1AHE 401 D 1 HETATM 34 S S03 A1AHE . . . H 3 -37.95 -6.817 12.343 1 36.85 ? S03 A1AHE 401 D 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #