data_9AYH # _model_server_result.job_id hm8TOfYaxRfCpSlqPRMI5g _model_server_result.datetime_utc '2024-11-14 16:59:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ayh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2401}' # _entry.id 9AYH # _exptl.entry_id 9AYH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 378.388 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(4-cyclopropylphenyl)-N-{(1R)-1-[5-(2,2,2-trifluoroethoxy)pyridin-2-yl]ethyl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9AYH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AYH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 166 A CYS 123 1_555 A SG CYS 702 A CYS 939 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 303 A CYS 260 1_555 A SG CYS 345 A CYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 334 A CYS 291 1_555 A SG CYS 390 A CYS 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 1222 A CYS 1459 1_555 A SG CYS 1236 A CYS 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 1539 A CYS 1776 1_555 A SG CYS 1545 A CYS 1782 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 1584 A CYS 1821 1_555 A SG CYS 1591 A CYS 1828 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE2 GLU 421 A GLU 378 1_555 E CA CA . A CA 2404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc2 A OE1 GLU 737 A GLU 974 1_555 E CA CA . A CA 2404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc3 A OD1 ASP 1267 A ASP 1504 1_555 E CA CA . A CA 2404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? # _chem_comp.formula 'C20 H21 F3 N2 O2' _chem_comp.formula_weight 378.388 _chem_comp.id A1AHH _chem_comp.mon_nstd_flag . _chem_comp.name 2-(4-cyclopropylphenyl)-N-{(1R)-1-[5-(2,2,2-trifluoroethoxy)pyridin-2-yl]ethyl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C15 A1AHH doub 1 n y C13 C11 A1AHH sing 2 n y C15 C16 A1AHH sing 3 n y C08 C11 A1AHH sing 4 n n C08 C10 A1AHH sing 5 n n C08 C09 A1AHH sing 6 n n C11 C12 A1AHH doub 7 n y C16 C17 A1AHH sing 8 n n C16 C14 A1AHH doub 9 n y C10 C09 A1AHH sing 10 n n C17 C18 A1AHH sing 11 n n C12 C14 A1AHH sing 12 n y O04 C18 A1AHH doub 13 n n C18 N06 A1AHH sing 14 n n F01 C27 A1AHH sing 15 n n N06 C19 A1AHH sing 16 n n F03 C27 A1AHH sing 17 n n C27 C26 A1AHH sing 18 n n C27 F02 A1AHH sing 19 n n C26 O05 A1AHH sing 20 n n C19 C20 A1AHH sing 21 n n C19 C21 A1AHH sing 22 n n C20 N07 A1AHH doub 23 n y C20 C22 A1AHH sing 24 n y N07 C25 A1AHH sing 25 n y C22 C23 A1AHH doub 26 n y C25 C24 A1AHH doub 27 n y C23 C24 A1AHH sing 28 n y C24 O05 A1AHH sing 29 n n C10 H1 A1AHH sing 30 n n C10 H2 A1AHH sing 31 n n C13 H3 A1AHH sing 32 n n C15 H4 A1AHH sing 33 n n C17 H5 A1AHH sing 34 n n C17 H6 A1AHH sing 35 n n C21 H7 A1AHH sing 36 n n C21 H8 A1AHH sing 37 n n C21 H9 A1AHH sing 38 n n C22 H10 A1AHH sing 39 n n C26 H11 A1AHH sing 40 n n C26 H12 A1AHH sing 41 n n C08 H13 A1AHH sing 42 n n C09 H14 A1AHH sing 43 n n C09 H15 A1AHH sing 44 n n C12 H16 A1AHH sing 45 n n C14 H17 A1AHH sing 46 n n C19 H18 A1AHH sing 47 n n C23 H19 A1AHH sing 48 n n C25 H20 A1AHH sing 49 n n N06 H21 A1AHH sing 50 n n # _atom_sites.entry_id 9AYH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1AHH A 1 2401 1901 A1AHH LIG . C 3 NAG A 1 2402 1 NAG NAG . D 3 NAG A 1 2403 2 NAG NAG . E 4 CA A 1 2404 3 CA CA . F 5 LPE A 1 2405 10 LPE LPE . G 6 Y01 A 1 2406 11 Y01 Y01 . H 7 JL3 A 1 2407 12 JL3 3PE . I 6 Y01 A 1 2408 13 Y01 Y01 . J 7 JL3 A 1 2409 14 JL3 3PE . K 7 JL3 A 1 2410 15 JL3 3PE . L 7 JL3 A 1 2411 16 JL3 3PE . M 6 Y01 A 1 2412 17 Y01 Y01 . N 6 Y01 A 1 2413 18 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1AHH . . . B 2 131.834 133.179 135.731 1 47.93 ? C10 A1AHH 2401 A 1 HETATM 2 C C13 A1AHH . . . B 2 132.801 129.8 134.689 1 45.86 ? C13 A1AHH 2401 A 1 HETATM 3 C C15 A1AHH . . . B 2 133.367 128.391 134.911 1 42.23 ? C15 A1AHH 2401 A 1 HETATM 4 C C17 A1AHH . . . B 2 135.246 126.791 135.923 1 39.85 ? C17 A1AHH 2401 A 1 HETATM 5 C C20 A1AHH . . . B 2 134.769 124.575 139.735 1 36.33 ? C20 A1AHH 2401 A 1 HETATM 6 C C21 A1AHH . . . B 2 134.503 126.77 140.918 1 50.83 ? C21 A1AHH 2401 A 1 HETATM 7 C C22 A1AHH . . . B 2 136.292 124.396 139.776 1 39.17 ? C22 A1AHH 2401 A 1 HETATM 8 C C24 A1AHH . . . B 2 135.982 121.828 139.904 1 41.86 ? C24 A1AHH 2401 A 1 HETATM 9 C C26 A1AHH . . . B 2 137.644 120.357 139.116 1 46.99 ? C26 A1AHH 2401 A 1 HETATM 10 C C08 A1AHH . . . B 2 132.977 132.437 135.031 1 43.25 ? C08 A1AHH 2401 A 1 HETATM 11 C C09 A1AHH . . . B 2 133.255 133.735 135.795 1 45.07 ? C09 A1AHH 2401 A 1 HETATM 12 C C11 A1AHH . . . B 2 133.542 131.021 135.254 1 46.28 ? C11 A1AHH 2401 A 1 HETATM 13 C C12 A1AHH . . . B 2 134.849 130.835 136.038 1 48.2 ? C12 A1AHH 2401 A 1 HETATM 14 C C14 A1AHH . . . B 2 135.415 129.426 136.261 1 41.12 ? C14 A1AHH 2401 A 1 HETATM 15 C C16 A1AHH . . . B 2 134.672 128.206 135.697 1 35.73 ? C16 A1AHH 2401 A 1 HETATM 16 C C18 A1AHH . . . B 2 134.556 126.138 137.14 1 45.13 ? C18 A1AHH 2401 A 1 HETATM 17 C C19 A1AHH . . . B 2 134.201 125.99 139.636 1 47.73 ? C19 A1AHH 2401 A 1 HETATM 18 C C23 A1AHH . . . B 2 136.884 123.023 139.862 1 46.65 ? C23 A1AHH 2401 A 1 HETATM 19 C C25 A1AHH . . . B 2 134.457 122.01 139.857 1 43.39 ? C25 A1AHH 2401 A 1 HETATM 20 C C27 A1AHH . . . B 2 137.764 118.866 138.764 1 50.6 ? C27 A1AHH 2401 A 1 HETATM 21 F F01 A1AHH . . . B 2 137.109 118.625 137.589 1 48.84 ? F01 A1AHH 2401 A 1 HETATM 22 F F02 A1AHH . . . B 2 137.192 118.127 139.76 1 53.53 ? F02 A1AHH 2401 A 1 HETATM 23 F F03 A1AHH . . . B 2 139.083 118.53 138.638 1 48.8 ? F03 A1AHH 2401 A 1 HETATM 24 N N06 A1AHH . . . B 2 134.85 126.619 138.498 1 54.7 ? N06 A1AHH 2401 A 1 HETATM 25 N N07 A1AHH . . . B 2 133.871 123.384 139.77 1 45.19 ? N07 A1AHH 2401 A 1 HETATM 26 O O04 A1AHH . . . B 2 133.781 125.252 136.979 1 44.99 ? O04 A1AHH 2401 A 1 HETATM 27 O O05 A1AHH . . . B 2 136.544 120.537 139.982 1 39.85 ? O05 A1AHH 2401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #