data_9AYP # _model_server_result.job_id 2Yhgy6fAgBd0H4SzHJCobA _model_server_result.datetime_utc '2025-06-30 12:44:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ayp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":203}' # _entry.id 9AYP # _exptl.entry_id 9AYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9AYP _cell.length_a 51.578 _cell.length_b 52.145 _cell.length_c 54.575 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 45 B HIS 65 1_555 C CO CO . B CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc2 A ND1 HIS 45 B HIS 65 1_555 F CO CO . B CO 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc3 A OE1 GLU 58 B GLU 78 1_555 D CO CO . B CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc4 A OE1 GLU 61 B GLU 81 1_555 D CO CO . B CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc5 A NE2 HIS 68 B HIS 88 1_555 E CO CO . B CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc6 A NE2 HIS 68 B HIS 88 1_555 G CO CO . B CO 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc7 A NE2 HIS 68 B HIS 88 1_555 H CO CO . B CO 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc8 A OD1 ASP 79 B ASP 99 1_555 J CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc9 D CO CO . B CO 202 1_555 L O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc10 D CO CO . B CO 202 1_555 L O HOH . B HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc11 D CO CO . B CO 202 1_555 L O HOH . B HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc12 D CO CO . B CO 202 4_546 B ND1 HIS 68 A HIS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc13 E CO CO . B CO 203 1_555 M O HOH . A HOH 303 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc14 E CO CO . B CO 203 1_555 M O HOH . A HOH 338 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc15 G CO CO . B CO 205 3_555 B OE2 GLU 61 A GLU 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc16 G CO CO . B CO 205 1_555 M O HOH . A HOH 303 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc17 H CO CO . B CO 206 1_555 M O HOH . A HOH 303 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc18 L O HOH . B HOH 305 1_555 J CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc19 L O HOH . B HOH 317 1_555 J CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc20 B O TRP 12 A TRP 32 1_555 K MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc21 B OD2 ASP 14 A ASP 34 1_555 K MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc22 B NE2 HIS 45 A HIS 65 1_555 I CO CO . A CO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc23 B OD1 ASP 79 A ASP 99 1_555 J CO CO . A CO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc24 I CO CO . A CO 201 1_555 M O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc25 I CO CO . A CO 201 1_555 M O HOH . A HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc26 I CO CO . A CO 201 1_555 M O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc27 I CO CO . A CO 201 1_555 M O HOH . A HOH 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc28 J CO CO . A CO 202 1_555 M O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc29 J CO CO . A CO 202 1_555 M O HOH . A HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9AYP _atom_sites.fract_transf_matrix[1][1] 0.019388 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO B 1 201 1 CO CO . D 2 CO B 1 202 2 CO CO . E 2 CO B 1 203 4 CO CO . F 2 CO B 1 204 6 CO CO . G 2 CO B 1 205 7 CO CO . H 2 CO B 1 206 8 CO CO . I 2 CO A 1 201 3 CO CO . J 2 CO A 1 202 5 CO CO . K 3 MG A 1 203 1 MG MG . L 4 HOH B 1 301 104 HOH HOH . L 4 HOH B 2 302 42 HOH HOH . L 4 HOH B 3 303 109 HOH HOH . L 4 HOH B 4 304 216 HOH HOH . L 4 HOH B 5 305 70 HOH HOH . L 4 HOH B 6 306 44 HOH HOH . L 4 HOH B 7 307 97 HOH HOH . L 4 HOH B 8 308 34 HOH HOH . L 4 HOH B 9 309 82 HOH HOH . L 4 HOH B 10 310 107 HOH HOH . L 4 HOH B 11 311 17 HOH HOH . L 4 HOH B 12 312 45 HOH HOH . L 4 HOH B 13 313 119 HOH HOH . L 4 HOH B 14 314 7 HOH HOH . L 4 HOH B 15 315 4 HOH HOH . L 4 HOH B 16 316 26 HOH HOH . L 4 HOH B 17 317 122 HOH HOH . L 4 HOH B 18 318 58 HOH HOH . L 4 HOH B 19 319 116 HOH HOH . L 4 HOH B 20 320 207 HOH HOH . L 4 HOH B 21 321 14 HOH HOH . L 4 HOH B 22 322 67 HOH HOH . L 4 HOH B 23 323 204 HOH HOH . L 4 HOH B 24 324 39 HOH HOH . L 4 HOH B 25 325 16 HOH HOH . L 4 HOH B 26 326 80 HOH HOH . L 4 HOH B 27 327 113 HOH HOH . L 4 HOH B 28 328 92 HOH HOH . L 4 HOH B 29 329 210 HOH HOH . L 4 HOH B 30 330 212 HOH HOH . L 4 HOH B 31 331 30 HOH HOH . L 4 HOH B 32 332 8 HOH HOH . L 4 HOH B 33 333 29 HOH HOH . L 4 HOH B 34 334 133 HOH HOH . L 4 HOH B 35 335 20 HOH HOH . L 4 HOH B 36 336 37 HOH HOH . L 4 HOH B 37 337 144 HOH HOH . L 4 HOH B 38 338 85 HOH HOH . L 4 HOH B 39 339 135 HOH HOH . L 4 HOH B 40 340 59 HOH HOH . L 4 HOH B 41 341 28 HOH HOH . L 4 HOH B 42 342 106 HOH HOH . L 4 HOH B 43 343 150 HOH HOH . L 4 HOH B 44 344 40 HOH HOH . L 4 HOH B 45 345 43 HOH HOH . L 4 HOH B 46 346 89 HOH HOH . L 4 HOH B 47 347 25 HOH HOH . L 4 HOH B 48 348 158 HOH HOH . L 4 HOH B 49 349 49 HOH HOH . L 4 HOH B 50 350 64 HOH HOH . L 4 HOH B 51 351 205 HOH HOH . L 4 HOH B 52 352 32 HOH HOH . L 4 HOH B 53 353 63 HOH HOH . L 4 HOH B 54 354 203 HOH HOH . L 4 HOH B 55 355 95 HOH HOH . L 4 HOH B 56 356 200 HOH HOH . L 4 HOH B 57 357 131 HOH HOH . L 4 HOH B 58 358 168 HOH HOH . L 4 HOH B 59 359 199 HOH HOH . L 4 HOH B 60 360 196 HOH HOH . L 4 HOH B 61 361 21 HOH HOH . L 4 HOH B 62 362 99 HOH HOH . L 4 HOH B 63 363 180 HOH HOH . L 4 HOH B 64 364 211 HOH HOH . L 4 HOH B 65 365 191 HOH HOH . L 4 HOH B 66 366 36 HOH HOH . L 4 HOH B 67 367 103 HOH HOH . L 4 HOH B 68 368 198 HOH HOH . L 4 HOH B 69 369 76 HOH HOH . L 4 HOH B 70 370 51 HOH HOH . L 4 HOH B 71 371 143 HOH HOH . L 4 HOH B 72 372 206 HOH HOH . L 4 HOH B 73 373 209 HOH HOH . L 4 HOH B 74 374 201 HOH HOH . L 4 HOH B 75 375 41 HOH HOH . L 4 HOH B 76 376 108 HOH HOH . M 4 HOH A 1 301 112 HOH HOH . M 4 HOH A 2 302 121 HOH HOH . M 4 HOH A 3 303 164 HOH HOH . M 4 HOH A 4 304 31 HOH HOH . M 4 HOH A 5 305 215 HOH HOH . M 4 HOH A 6 306 118 HOH HOH . M 4 HOH A 7 307 172 HOH HOH . M 4 HOH A 8 308 140 HOH HOH . M 4 HOH A 9 309 72 HOH HOH . M 4 HOH A 10 310 214 HOH HOH . M 4 HOH A 11 311 12 HOH HOH . M 4 HOH A 12 312 33 HOH HOH . M 4 HOH A 13 313 125 HOH HOH . M 4 HOH A 14 314 38 HOH HOH . M 4 HOH A 15 315 91 HOH HOH . M 4 HOH A 16 316 69 HOH HOH . M 4 HOH A 17 317 3 HOH HOH . M 4 HOH A 18 318 24 HOH HOH . M 4 HOH A 19 319 22 HOH HOH . M 4 HOH A 20 320 6 HOH HOH . M 4 HOH A 21 321 117 HOH HOH . M 4 HOH A 22 322 18 HOH HOH . M 4 HOH A 23 323 120 HOH HOH . M 4 HOH A 24 324 208 HOH HOH . M 4 HOH A 25 325 54 HOH HOH . M 4 HOH A 26 326 56 HOH HOH . M 4 HOH A 27 327 19 HOH HOH . M 4 HOH A 28 328 79 HOH HOH . M 4 HOH A 29 329 9 HOH HOH . M 4 HOH A 30 330 10 HOH HOH . M 4 HOH A 31 331 48 HOH HOH . M 4 HOH A 32 332 96 HOH HOH . M 4 HOH A 33 333 115 HOH HOH . M 4 HOH A 34 334 46 HOH HOH . M 4 HOH A 35 335 65 HOH HOH . M 4 HOH A 36 336 2 HOH HOH . M 4 HOH A 37 337 84 HOH HOH . M 4 HOH A 38 338 23 HOH HOH . M 4 HOH A 39 339 11 HOH HOH . M 4 HOH A 40 340 1 HOH HOH . M 4 HOH A 41 341 139 HOH HOH . M 4 HOH A 42 342 75 HOH HOH . M 4 HOH A 43 343 57 HOH HOH . M 4 HOH A 44 344 130 HOH HOH . M 4 HOH A 45 345 15 HOH HOH . M 4 HOH A 46 346 195 HOH HOH . M 4 HOH A 47 347 134 HOH HOH . M 4 HOH A 48 348 87 HOH HOH . M 4 HOH A 49 349 88 HOH HOH . M 4 HOH A 50 350 160 HOH HOH . M 4 HOH A 51 351 102 HOH HOH . M 4 HOH A 52 352 27 HOH HOH . M 4 HOH A 53 353 60 HOH HOH . M 4 HOH A 54 354 98 HOH HOH . M 4 HOH A 55 355 101 HOH HOH . M 4 HOH A 56 356 129 HOH HOH . M 4 HOH A 57 357 50 HOH HOH . M 4 HOH A 58 358 13 HOH HOH . M 4 HOH A 59 359 78 HOH HOH . M 4 HOH A 60 360 213 HOH HOH . M 4 HOH A 61 361 157 HOH HOH . M 4 HOH A 62 362 114 HOH HOH . M 4 HOH A 63 363 185 HOH HOH . M 4 HOH A 64 364 126 HOH HOH . M 4 HOH A 65 365 35 HOH HOH . M 4 HOH A 66 366 52 HOH HOH . M 4 HOH A 67 367 187 HOH HOH . M 4 HOH A 68 368 178 HOH HOH . M 4 HOH A 69 369 68 HOH HOH . M 4 HOH A 70 370 53 HOH HOH . M 4 HOH A 71 371 159 HOH HOH . M 4 HOH A 72 372 124 HOH HOH . M 4 HOH A 73 373 47 HOH HOH . M 4 HOH A 74 374 127 HOH HOH . M 4 HOH A 75 375 136 HOH HOH . M 4 HOH A 76 376 93 HOH HOH . M 4 HOH A 77 377 94 HOH HOH . M 4 HOH A 78 378 66 HOH HOH . M 4 HOH A 79 379 77 HOH HOH . M 4 HOH A 80 380 123 HOH HOH . M 4 HOH A 81 381 132 HOH HOH . M 4 HOH A 82 382 86 HOH HOH . M 4 HOH A 83 383 148 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 1.765 _atom_site.Cartn_y -4.259 _atom_site.Cartn_z 35.024 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #