data_9AZL
#
_model_server_result.job_id            Y32HN95aISWToJ1DhX8QYQ 
_model_server_result.datetime_utc      '2024-12-27 02:16:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9azl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":803}' 
#
_entry.id    9AZL 
#
_exptl.entry_id    9AZL 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9AZL 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9AZL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLN 590 A GLN 567 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? 
metalc ? metalc2 C O3B ADP . A ADP 801 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc3 B OG1 THR 549 B THR 526 1_555 F MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc4 B OE1 GLN 590 B GLN 567 1_555 F MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc5 E O3B ADP . B ADP 801 1_555 F MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 302 n n 
N C13 POV sing 303 n n 
N C14 POV sing 304 n n 
N C15 POV sing 305 n n 
P O11 POV sing 306 n n 
P O12 POV sing 307 n n 
P O13 POV sing 308 n n 
P O14 POV doub 309 n n 
C1 C2 POV sing 310 n n 
C1 O11 POV sing 311 n n 
C1 H1 POV sing 312 n n 
C1 H1A POV sing 313 n n 
C2 C3 POV sing 314 n n 
C2 O21 POV sing 315 n n 
C2 H2 POV sing 316 n n 
C3 O31 POV sing 317 n n 
C3 H3 POV sing 318 n n 
C3 H3A POV sing 319 n n 
C210 C211 POV sing 320 n n 
C210 C29 POV doub 321 z n 
C210 H210 POV sing 322 n n 
C310 C311 POV sing 323 n n 
C310 C39 POV sing 324 n n 
C310 H310 POV sing 325 n n 
C310 H31A POV sing 326 n n 
C11 C12 POV sing 327 n n 
C11 O12 POV sing 328 n n 
C11 H11 POV sing 329 n n 
C11 H11A POV sing 330 n n 
C211 C212 POV sing 331 n n 
C211 H211 POV sing 332 n n 
C211 H21A POV sing 333 n n 
C311 C312 POV sing 334 n n 
C311 H311 POV sing 335 n n 
C311 H31B POV sing 336 n n 
C12 H12 POV sing 337 n n 
C12 H12A POV sing 338 n n 
C212 C213 POV sing 339 n n 
C212 H212 POV sing 340 n n 
C212 H21B POV sing 341 n n 
C312 C313 POV sing 342 n n 
C312 H312 POV sing 343 n n 
C312 H31C POV sing 344 n n 
C13 H13 POV sing 345 n n 
C13 H13A POV sing 346 n n 
C13 H13B POV sing 347 n n 
C213 C214 POV sing 348 n n 
C213 H213 POV sing 349 n n 
C213 H21C POV sing 350 n n 
C313 C314 POV sing 351 n n 
C313 H313 POV sing 352 n n 
C313 H31D POV sing 353 n n 
C14 H14 POV sing 354 n n 
C14 H14A POV sing 355 n n 
C14 H14B POV sing 356 n n 
C214 C215 POV sing 357 n n 
C214 H214 POV sing 358 n n 
C214 H21D POV sing 359 n n 
C314 C315 POV sing 360 n n 
C314 H314 POV sing 361 n n 
C314 H31E POV sing 362 n n 
C15 H15 POV sing 363 n n 
C15 H15A POV sing 364 n n 
C15 H15B POV sing 365 n n 
C215 C216 POV sing 366 n n 
C215 H215 POV sing 367 n n 
C215 H21E POV sing 368 n n 
C315 C316 POV sing 369 n n 
C315 H315 POV sing 370 n n 
C315 H31F POV sing 371 n n 
C216 C217 POV sing 372 n n 
C216 H216 POV sing 373 n n 
C216 H21F POV sing 374 n n 
C316 H316 POV sing 375 n n 
C316 H31G POV sing 376 n n 
C316 H31H POV sing 377 n n 
C217 C218 POV sing 378 n n 
C217 H217 POV sing 379 n n 
C217 H21G POV sing 380 n n 
C218 H218 POV sing 381 n n 
C218 H21H POV sing 382 n n 
C218 H21J POV sing 383 n n 
C21 O21 POV sing 384 n n 
C21 C22 POV sing 385 n n 
C21 O22 POV doub 386 n n 
C22 C23 POV sing 387 n n 
C22 H22 POV sing 388 n n 
C22 H22A POV sing 389 n n 
C23 C24 POV sing 390 n n 
C23 H23 POV sing 391 n n 
C23 H23A POV sing 392 n n 
C24 C25 POV sing 393 n n 
C24 H24 POV sing 394 n n 
C24 H24A POV sing 395 n n 
C25 C26 POV sing 396 n n 
C25 H25 POV sing 397 n n 
C25 H25A POV sing 398 n n 
C26 C27 POV sing 399 n n 
C26 H26 POV sing 400 n n 
C26 H26A POV sing 401 n n 
C27 C28 POV sing 402 n n 
C27 H27 POV sing 403 n n 
C27 H27A POV sing 404 n n 
C28 C29 POV sing 405 n n 
C28 H28 POV sing 406 n n 
C28 H28A POV sing 407 n n 
C29 H29 POV sing 408 n n 
C31 O31 POV sing 409 n n 
C31 C32 POV sing 410 n n 
C31 O32 POV doub 411 n n 
C32 C33 POV sing 412 n n 
C32 H32 POV sing 413 n n 
C32 H32A POV sing 414 n n 
C33 C34 POV sing 415 n n 
C33 H33 POV sing 416 n n 
C33 H33A POV sing 417 n n 
C34 C35 POV sing 418 n n 
C34 H34 POV sing 419 n n 
C34 H34A POV sing 420 n n 
C35 C36 POV sing 421 n n 
C35 H35 POV sing 422 n n 
C35 H35A POV sing 423 n n 
C36 C37 POV sing 424 n n 
C36 H36 POV sing 425 n n 
C36 H36A POV sing 426 n n 
C37 C38 POV sing 427 n n 
C37 H37 POV sing 428 n n 
C37 H37A POV sing 429 n n 
C38 C39 POV sing 430 n n 
C38 H38 POV sing 431 n n 
C38 H38A POV sing 432 n n 
C39 H39 POV sing 433 n n 
C39 H39A POV sing 434 n n 
#
_atom_sites.entry_id                     9AZL 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP A 1 801 801 ADP ADP . 
D 3 MG A 1 802 802 MG MG . 
E 2 ADP B 1 801 801 ADP ADP . 
F 3 MG B 1 802 802 MG MG . 
G 4 POV B 1 803 803 POV EPC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . G 4 106.144 96.09 161.753 1 119.78 ? N POV 803 B 1 
HETATM 2 P P POV . . . G 4 108.905 98.874 160.669 1 133.17 ? P POV 803 B 1 
HETATM 3 C C1 POV . . . G 4 108.622 98.087 158.169 1 111.57 ? C1 POV 803 B 1 
HETATM 4 C C2 POV . . . G 4 108.024 99.431 157.712 1 114.79 ? C2 POV 803 B 1 
HETATM 5 C C3 POV . . . G 4 106.551 99.361 157.265 1 116.65 ? C3 POV 803 B 1 
HETATM 6 C C210 POV . . . G 4 103.242 102.392 148.073 1 108.63 ? C210 POV 803 B 1 
HETATM 7 C C310 POV . . . G 4 102.982 105.785 152.219 1 105.44 ? C310 POV 803 B 1 
HETATM 8 C C11 POV . . . G 4 106.649 98.545 162 1 111.11 ? C11 POV 803 B 1 
HETATM 9 O O11 POV . . . G 4 109.517 98.36 159.222 1 117.16 ? O11 POV 803 B 1 
HETATM 10 C C211 POV . . . G 4 103.755 102.942 146.727 1 107.02 ? C211 POV 803 B 1 
HETATM 11 C C311 POV . . . G 4 102.138 104.627 151.708 1 108.03 ? C311 POV 803 B 1 
HETATM 12 C C12 POV . . . G 4 105.611 97.405 162.03 1 115.28 ? C12 POV 803 B 1 
HETATM 13 O O12 POV . . . G 4 107.277 98.6 160.727 1 117.04 ? O12 POV 803 B 1 
HETATM 14 C C212 POV . . . G 4 105.115 102.33 146.33 1 104.59 ? C212 POV 803 B 1 
HETATM 15 C C312 POV . . . G 4 102.117 104.589 150.182 1 109.39 ? C312 POV 803 B 1 
HETATM 16 C C13 POV . . . G 4 106.561 95.95 160.385 1 114.91 ? C13 POV 803 B 1 
HETATM 17 O O13 POV . . . G 4 109.615 98.135 161.785 1 109.61 ? O13 POV 803 B 1 
HETATM 18 C C213 POV . . . G 4 105.599 102.819 144.948 1 103.86 ? C213 POV 803 B 1 
HETATM 19 C C313 POV . . . G 4 101.179 105.61 149.558 1 110.36 ? C313 POV 803 B 1 
HETATM 20 C C14 POV . . . G 4 105.086 95.156 161.982 1 112.65 ? C14 POV 803 B 1 
HETATM 21 O O14 POV . . . G 4 109.131 100.364 160.822 1 116.48 ? O14 POV 803 B 1 
HETATM 22 C C214 POV . . . G 4 105.906 104.327 144.936 1 106.55 ? C214 POV 803 B 1 
HETATM 23 C C314 POV . . . G 4 101.065 105.311 148.066 1 110.16 ? C314 POV 803 B 1 
HETATM 24 C C15 POV . . . G 4 107.22 95.77 162.649 1 110.68 ? C15 POV 803 B 1 
HETATM 25 C C215 POV . . . G 4 105.53 104.929 143.575 1 103.61 ? C215 POV 803 B 1 
HETATM 26 C C315 POV . . . G 4 101.081 106.558 147.165 1 110.73 ? C315 POV 803 B 1 
HETATM 27 C C216 POV . . . G 4 104.157 105.586 143.61 1 106.05 ? C216 POV 803 B 1 
HETATM 28 C C316 POV . . . G 4 101.916 106.348 145.894 1 105.81 ? C316 POV 803 B 1 
HETATM 29 C C217 POV . . . G 4 103.89 106.213 142.25 1 107.53 ? C217 POV 803 B 1 
HETATM 30 C C218 POV . . . G 4 102.416 106.505 142.033 1 104.88 ? C218 POV 803 B 1 
HETATM 31 C C21 POV . . . G 4 108.21 101.089 156.078 1 109.92 ? C21 POV 803 B 1 
HETATM 32 O O21 POV . . . G 4 108.803 99.965 156.673 1 110.69 ? O21 POV 803 B 1 
HETATM 33 C C22 POV . . . G 4 107.627 100.941 154.677 1 107.09 ? C22 POV 803 B 1 
HETATM 34 O O22 POV . . . G 4 108.149 102.12 156.649 1 108.48 ? O22 POV 803 B 1 
HETATM 35 C C23 POV . . . G 4 106.154 101.291 154.637 1 105.56 ? C23 POV 803 B 1 
HETATM 36 C C24 POV . . . G 4 105.708 101.524 153.204 1 106.66 ? C24 POV 803 B 1 
HETATM 37 C C25 POV . . . G 4 106.152 100.346 152.324 1 109.45 ? C25 POV 803 B 1 
HETATM 38 C C26 POV . . . G 4 105.685 100.499 150.873 1 108.28 ? C26 POV 803 B 1 
HETATM 39 C C27 POV . . . G 4 104.155 100.396 150.753 1 112.07 ? C27 POV 803 B 1 
HETATM 40 C C28 POV . . . G 4 103.597 101.796 150.481 1 109.93 ? C28 POV 803 B 1 
HETATM 41 C C29 POV . . . G 4 104.081 102.326 149.119 1 108.83 ? C29 POV 803 B 1 
HETATM 42 C C31 POV . . . G 4 104.742 99.339 158.757 1 115.13 ? C31 POV 803 B 1 
HETATM 43 O O31 POV . . . G 4 105.817 98.613 158.206 1 115.79 ? O31 POV 803 B 1 
HETATM 44 C C32 POV . . . G 4 103.618 99.854 157.843 1 113.28 ? C32 POV 803 B 1 
HETATM 45 O O32 POV . . . G 4 104.699 99.555 159.917 1 115.23 ? O32 POV 803 B 1 
HETATM 46 C C33 POV . . . G 4 103.282 101.324 158.122 1 112.44 ? C33 POV 803 B 1 
HETATM 47 C C34 POV . . . G 4 103.562 102.247 156.926 1 110.66 ? C34 POV 803 B 1 
HETATM 48 C C35 POV . . . G 4 104.462 103.408 157.335 1 110.31 ? C35 POV 803 B 1 
HETATM 49 C C36 POV . . . G 4 104.221 104.639 156.486 1 110.38 ? C36 POV 803 B 1 
HETATM 50 C C37 POV . . . G 4 104.736 104.425 155.07 1 109.73 ? C37 POV 803 B 1 
HETATM 51 C C38 POV . . . G 4 104.503 105.69 154.251 1 104.1 ? C38 POV 803 B 1 
HETATM 52 C C39 POV . . . G 4 104.362 105.399 152.753 1 105.35 ? C39 POV 803 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           52 
#