data_9AZZ # _model_server_result.job_id StO1dCIftkWYqAsJoCMnUQ _model_server_result.datetime_utc '2024-12-21 17:43:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9azz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 9AZZ # _exptl.entry_id 9AZZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.96 _cell.angle_gamma 90 _cell.entry_id 9AZZ _cell.length_a 80.647 _cell.length_b 53.021 _cell.length_c 80.802 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9AZZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,F,H 2 1 C,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 9AZZ _atom_sites.fract_transf_matrix[1][1] 0.0124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006308 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013885 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL A 1 201 202 GOL GOL . E 2 GOL B 1 201 201 GOL GOL . F 3 PG4 B 1 202 1 PG4 PG4 . G 4 HOH A 1 301 113 HOH HOH . G 4 HOH A 2 302 66 HOH HOH . G 4 HOH A 3 303 4 HOH HOH . G 4 HOH A 4 304 73 HOH HOH . G 4 HOH A 5 305 70 HOH HOH . G 4 HOH A 6 306 107 HOH HOH . G 4 HOH A 7 307 24 HOH HOH . G 4 HOH A 8 308 85 HOH HOH . G 4 HOH A 9 309 46 HOH HOH . G 4 HOH A 10 310 103 HOH HOH . G 4 HOH A 11 311 6 HOH HOH . G 4 HOH A 12 312 69 HOH HOH . G 4 HOH A 13 313 57 HOH HOH . G 4 HOH A 14 314 78 HOH HOH . G 4 HOH A 15 315 3 HOH HOH . G 4 HOH A 16 316 21 HOH HOH . G 4 HOH A 17 317 102 HOH HOH . G 4 HOH A 18 318 71 HOH HOH . G 4 HOH A 19 319 43 HOH HOH . G 4 HOH A 20 320 40 HOH HOH . G 4 HOH A 21 321 8 HOH HOH . G 4 HOH A 22 322 50 HOH HOH . G 4 HOH A 23 323 15 HOH HOH . G 4 HOH A 24 324 92 HOH HOH . G 4 HOH A 25 325 99 HOH HOH . G 4 HOH A 26 326 104 HOH HOH . G 4 HOH A 27 327 75 HOH HOH . G 4 HOH A 28 328 82 HOH HOH . G 4 HOH A 29 329 38 HOH HOH . G 4 HOH A 30 330 110 HOH HOH . G 4 HOH A 31 331 11 HOH HOH . G 4 HOH A 32 332 41 HOH HOH . G 4 HOH A 33 333 2 HOH HOH . G 4 HOH A 34 334 95 HOH HOH . G 4 HOH A 35 335 14 HOH HOH . G 4 HOH A 36 336 106 HOH HOH . G 4 HOH A 37 337 44 HOH HOH . G 4 HOH A 38 338 96 HOH HOH . G 4 HOH A 39 339 62 HOH HOH . G 4 HOH A 40 340 36 HOH HOH . G 4 HOH A 41 341 17 HOH HOH . G 4 HOH A 42 342 100 HOH HOH . G 4 HOH A 43 343 77 HOH HOH . G 4 HOH A 44 344 54 HOH HOH . G 4 HOH A 45 345 84 HOH HOH . G 4 HOH A 46 346 115 HOH HOH . G 4 HOH A 47 347 116 HOH HOH . G 4 HOH A 48 348 32 HOH HOH . G 4 HOH A 49 349 91 HOH HOH . H 4 HOH B 1 301 51 HOH HOH . H 4 HOH B 2 302 117 HOH HOH . H 4 HOH B 3 303 83 HOH HOH . H 4 HOH B 4 304 19 HOH HOH . H 4 HOH B 5 305 67 HOH HOH . H 4 HOH B 6 306 98 HOH HOH . H 4 HOH B 7 307 52 HOH HOH . H 4 HOH B 8 308 34 HOH HOH . H 4 HOH B 9 309 31 HOH HOH . H 4 HOH B 10 310 5 HOH HOH . H 4 HOH B 11 311 35 HOH HOH . H 4 HOH B 12 312 118 HOH HOH . H 4 HOH B 13 313 45 HOH HOH . H 4 HOH B 14 314 33 HOH HOH . H 4 HOH B 15 315 29 HOH HOH . H 4 HOH B 16 316 111 HOH HOH . H 4 HOH B 17 317 10 HOH HOH . H 4 HOH B 18 318 30 HOH HOH . H 4 HOH B 19 319 108 HOH HOH . H 4 HOH B 20 320 53 HOH HOH . H 4 HOH B 21 321 61 HOH HOH . H 4 HOH B 22 322 48 HOH HOH . H 4 HOH B 23 323 12 HOH HOH . H 4 HOH B 24 324 23 HOH HOH . H 4 HOH B 25 325 25 HOH HOH . H 4 HOH B 26 326 18 HOH HOH . H 4 HOH B 27 327 105 HOH HOH . H 4 HOH B 28 328 112 HOH HOH . H 4 HOH B 29 329 68 HOH HOH . H 4 HOH B 30 330 109 HOH HOH . H 4 HOH B 31 331 79 HOH HOH . H 4 HOH B 32 332 37 HOH HOH . H 4 HOH B 33 333 97 HOH HOH . H 4 HOH B 34 334 47 HOH HOH . H 4 HOH B 35 335 93 HOH HOH . H 4 HOH B 36 336 1 HOH HOH . H 4 HOH B 37 337 80 HOH HOH . H 4 HOH B 38 338 86 HOH HOH . H 4 HOH B 39 339 89 HOH HOH . H 4 HOH B 40 340 81 HOH HOH . H 4 HOH B 41 341 90 HOH HOH . H 4 HOH B 42 342 87 HOH HOH . H 4 HOH B 43 343 101 HOH HOH . H 4 HOH B 44 344 94 HOH HOH . I 4 HOH C 1 201 114 HOH HOH . I 4 HOH C 2 202 72 HOH HOH . I 4 HOH C 3 203 76 HOH HOH . I 4 HOH C 4 204 74 HOH HOH . I 4 HOH C 5 205 56 HOH HOH . I 4 HOH C 6 206 58 HOH HOH . I 4 HOH C 7 207 65 HOH HOH . I 4 HOH C 8 208 7 HOH HOH . I 4 HOH C 9 209 13 HOH HOH . I 4 HOH C 10 210 39 HOH HOH . I 4 HOH C 11 211 16 HOH HOH . I 4 HOH C 12 212 27 HOH HOH . I 4 HOH C 13 213 20 HOH HOH . I 4 HOH C 14 214 63 HOH HOH . I 4 HOH C 15 215 9 HOH HOH . I 4 HOH C 16 216 26 HOH HOH . I 4 HOH C 17 217 49 HOH HOH . I 4 HOH C 18 218 22 HOH HOH . I 4 HOH C 19 219 64 HOH HOH . I 4 HOH C 20 220 55 HOH HOH . I 4 HOH C 21 221 28 HOH HOH . I 4 HOH C 22 222 59 HOH HOH . I 4 HOH C 23 223 60 HOH HOH . I 4 HOH C 24 224 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 35.527 28.377 26.642 1 46.33 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . D 2 36.334 28.842 25.591 1 39.7 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . D 2 36.24 28.578 27.954 1 49.31 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . D 2 35.41 28.142 29.016 1 58.26 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . D 2 37.532 27.767 28 1 47.83 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . D 2 38.209 27.936 26.784 1 49.46 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #