data_9B14
#
_model_server_result.job_id            4sTtpRiFH3rc-w-UHmMVLg 
_model_server_result.datetime_utc      '2025-03-02 23:52:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9b14 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":401}' 
#
_entry.id    9B14 
#
_exptl.entry_id    9B14 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              131.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9B14 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9B14 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 L N N 
? 2 O N N 
? 2 R N N 
? 2 U N N 
? 2 X N N 
? 2 AA N N 
? 2 DA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 J O3B ADP . A ADP 402 1_555 K MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc2 J O2A ADP . A ADP 402 1_555 K MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
metalc ? metalc3 M O3B ADP . B ADP 402 1_555 N MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc4 M O2A ADP . B ADP 402 1_555 N MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc5 P O3B ADP . C ADP 402 1_555 Q MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? 
metalc ? metalc6 P O2A ADP . C ADP 402 1_555 Q MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? 
metalc ? metalc7 S O3B ADP . D ADP 402 1_555 T MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc8 S O2A ADP . D ADP 402 1_555 T MG MG . D MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc9 V O3B ADP . E ADP 402 1_555 W MG MG . E MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc10 V O2A ADP . E ADP 402 1_555 W MG MG . E MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc11 Y O3B ADP . F ADP 402 1_555 Z MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc12 Y O2A ADP . F ADP 402 1_555 Z MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc13 BA O3B ADP . G ADP 402 1_555 CA MG MG . G MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? 
metalc ? metalc14 BA O2A ADP . G ADP 402 1_555 CA MG MG . G MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc15 EA O3B ADP . H ADP 402 1_555 FA MG MG . H MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? 
metalc ? metalc16 EA O2A ADP . H ADP 402 1_555 FA MG MG . H MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
#
_chem_comp.formula           'C4 H9 N3 O2' 
_chem_comp.formula_weight    131.133 
_chem_comp.id                CRN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     CREATINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O9 C7 CRN sing 114 n n 
O9 HO9 CRN sing 115 n n 
C7 O8 CRN doub 116 n n 
C7 C5 CRN sing 117 n n 
C5 N1 CRN sing 118 n n 
C5 H51 CRN sing 119 n n 
C5 H52 CRN sing 120 n n 
N1 C4 CRN sing 121 n n 
N1 C2 CRN sing 122 n n 
C4 H41 CRN sing 123 n n 
C4 H42 CRN sing 124 n n 
C4 H43 CRN sing 125 n n 
C2 N6 CRN doub 126 n n 
C2 N3 CRN sing 127 n n 
N6 HN6 CRN sing 128 n n 
N3 HN31 CRN sing 129 n n 
N3 HN32 CRN sing 130 n n 
#
_atom_sites.entry_id                     9B14 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 CRN A 1 401 401 CRN CRN . 
J 3 ADP A 1 402 402 ADP ADP . 
K 4 MG A 1 403 1 MG MG . 
L 2 CRN B 1 401 401 CRN CRN . 
M 3 ADP B 1 402 402 ADP ADP . 
N 4 MG B 1 403 2 MG MG . 
O 2 CRN C 1 401 401 CRN CRN . 
P 3 ADP C 1 402 402 ADP ADP . 
Q 4 MG C 1 403 3 MG MG . 
R 2 CRN D 1 401 401 CRN CRN . 
S 3 ADP D 1 402 402 ADP ADP . 
T 4 MG D 1 403 4 MG MG . 
U 2 CRN E 1 401 401 CRN CRN . 
V 3 ADP E 1 402 402 ADP ADP . 
W 4 MG E 1 403 5 MG MG . 
X 2 CRN F 1 401 401 CRN CRN . 
Y 3 ADP F 1 402 402 ADP ADP . 
Z 4 MG F 1 403 6 MG MG . 
AA 2 CRN G 1 401 401 CRN CRN . 
BA 3 ADP G 1 402 402 ADP ADP . 
CA 4 MG G 1 403 7 MG MG . 
DA 2 CRN H 1 401 404 CRN CRN . 
EA 3 ADP H 1 402 402 ADP ADP . 
FA 4 MG H 1 403 8 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O9 CRN . . . U 2 139.412 175.56 118.978 1 125.28 ? O9 CRN 401 E 1 
HETATM 2 C C7 CRN . . . U 2 138.386 175.434 119.677 1 122.47 ? C7 CRN 401 E 1 
HETATM 3 O O8 CRN . . . U 2 137.256 175.077 119.302 1 115.82 ? O8 CRN 401 E 1 
HETATM 4 C C5 CRN . . . U 2 138.572 175.761 121.169 1 122.36 ? C5 CRN 401 E 1 
HETATM 5 N N1 CRN . . . U 2 139.725 176.583 121.462 1 124.88 ? N1 CRN 401 E 1 
HETATM 6 C C4 CRN . . . U 2 139.512 178.001 121.656 1 122.5 ? C4 CRN 401 E 1 
HETATM 7 C C2 CRN . . . U 2 140.976 176.015 121.541 1 116.17 ? C2 CRN 401 E 1 
HETATM 8 N N6 CRN . . . U 2 141.988 176.765 121.8 1 119.8 ? N6 CRN 401 E 1 
HETATM 9 N N3 CRN . . . U 2 141.09 174.66 121.34 1 107.71 ? N3 CRN 401 E 1 
HETATM 10 H H51 CRN . . . U 2 138.594 174.942 121.687 1 116.96 ? H51 CRN 401 E 1 
HETATM 11 H H52 CRN . . . U 2 137.784 176.24 121.467 1 118.94 ? H52 CRN 401 E 1 
HETATM 12 H H41 CRN . . . U 2 140.109 178.318 122.351 1 121.7 ? H41 CRN 401 E 1 
HETATM 13 H H42 CRN . . . U 2 138.613 178.186 121.969 1 122.95 ? H42 CRN 401 E 1 
HETATM 14 H H43 CRN . . . U 2 139.678 178.529 120.86 1 121.06 ? H43 CRN 401 E 1 
HETATM 15 H HN31 CRN . . . U 2 140.373 174.167 121.165 1 109.61 ? HN31 CRN 401 E 1 
HETATM 16 H HN32 CRN . . . U 2 141.867 174.226 121.379 1 107.34 ? HN32 CRN 401 E 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    65 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#