data_9B3X # _model_server_result.job_id DK-T2-ImPq7PdlAACQmN0A _model_server_result.datetime_utc '2025-03-03 03:06:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9b3x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":801}' # _entry.id 9B3X # _exptl.entry_id 9B3X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 522.632 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9B3X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9B3X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C25 H49 N O8 P -1' _chem_comp.formula_weight 522.632 _chem_comp.id PEX _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 PEX sing 269 n n O2 P1 PEX doub 270 n n P1 O3 PEX sing 271 n n P1 O8 PEX sing 272 n n O3 C1 PEX sing 273 n n C1 C2 PEX sing 274 n n C1 H1 PEX sing 275 n n C1 H2 PEX sing 276 n n C2 C3 PEX sing 277 n n C2 O6 PEX sing 278 n n C2 H3 PEX sing 279 n n C3 O4 PEX sing 280 n n C3 H4 PEX sing 281 n n C3 H5 PEX sing 282 n n O4 C4 PEX sing 283 n n C4 O5 PEX doub 284 n n C4 C5 PEX sing 285 n n C5 C6 PEX sing 286 n n C5 H6 PEX sing 287 n n C5 H7 PEX sing 288 n n C6 C7 PEX sing 289 n n C6 H8 PEX sing 290 n n C6 H9 PEX sing 291 n n C7 C8 PEX sing 292 n n C7 H10 PEX sing 293 n n C7 H11 PEX sing 294 n n C8 C9 PEX sing 295 n n C8 H12 PEX sing 296 n n C8 H13 PEX sing 297 n n C9 C10 PEX sing 298 n n C9 H14 PEX sing 299 n n C9 H15 PEX sing 300 n n C10 C11 PEX sing 301 n n C10 H16 PEX sing 302 n n C10 H17 PEX sing 303 n n C11 C12 PEX sing 304 n n C11 H18 PEX sing 305 n n C11 H19 PEX sing 306 n n C12 C13 PEX sing 307 n n C12 H20 PEX sing 308 n n C12 H21 PEX sing 309 n n C13 H22 PEX sing 310 n n C13 H23 PEX sing 311 n n C13 H24 PEX sing 312 n n O6 C14 PEX sing 313 n n C14 O7 PEX doub 314 n n C14 C15 PEX sing 315 n n C15 C16 PEX sing 316 n n C15 H25 PEX sing 317 n n C15 H26 PEX sing 318 n n C16 C17 PEX sing 319 n n C16 H27 PEX sing 320 n n C16 H28 PEX sing 321 n n C17 C18 PEX sing 322 n n C17 H29 PEX sing 323 n n C17 H30 PEX sing 324 n n C18 C19 PEX sing 325 n n C18 H31 PEX sing 326 n n C18 H32 PEX sing 327 n n C19 C20 PEX sing 328 n n C19 H33 PEX sing 329 n n C19 H34 PEX sing 330 n n C20 C21 PEX sing 331 n n C20 H35 PEX sing 332 n n C20 H36 PEX sing 333 n n C21 C22 PEX sing 334 n n C21 H37 PEX sing 335 n n C21 H38 PEX sing 336 n n C22 C23 PEX sing 337 n n C22 H39 PEX sing 338 n n C22 H40 PEX sing 339 n n C23 H41 PEX sing 340 n n C23 H42 PEX sing 341 n n C23 H43 PEX sing 342 n n O8 C24 PEX sing 343 n n C24 C25 PEX sing 344 n n C24 H44 PEX sing 345 n n C24 H45 PEX sing 346 n n C25 N1 PEX sing 347 n n C25 H46 PEX sing 348 n n C25 H47 PEX sing 349 n n N1 H48 PEX sing 350 n n N1 H49 PEX sing 351 n n # _atom_sites.entry_id 9B3X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PEX A 1 801 1004 PEX PEX . F 3 FZ4 A 1 802 1005 FZ4 FZ4 . G 2 PEX B 1 801 1004 PEX PEX . H 3 FZ4 B 1 802 1005 FZ4 FZ4 . I 2 PEX C 1 801 1004 PEX PEX . J 3 FZ4 C 1 802 1005 FZ4 FZ4 . K 2 PEX D 1 801 1004 PEX PEX . L 3 FZ4 D 1 802 1005 FZ4 FZ4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PEX . . . G 2 101.826 151.612 147 1 69.47 ? O1 PEX 801 B 1 HETATM 2 O O2 PEX . . . G 2 99.569 152.038 145.819 1 73.39 ? O2 PEX 801 B 1 HETATM 3 P P1 PEX . . . G 2 100.327 151.524 147.006 1 84.2 ? P1 PEX 801 B 1 HETATM 4 O O3 PEX . . . G 2 99.74 152.169 148.401 1 70.21 ? O3 PEX 801 B 1 HETATM 5 C C1 PEX . . . G 2 99.472 153.553 148.428 1 63.84 ? C1 PEX 801 B 1 HETATM 6 C C2 PEX . . . G 2 98.769 153.996 149.702 1 60.48 ? C2 PEX 801 B 1 HETATM 7 C C3 PEX . . . G 2 99.523 153.698 150.978 1 58.87 ? C3 PEX 801 B 1 HETATM 8 O O4 PEX . . . G 2 98.669 153.886 152.099 1 72.9 ? O4 PEX 801 B 1 HETATM 9 C C4 PEX . . . G 2 99.177 153.656 153.302 1 67.34 ? C4 PEX 801 B 1 HETATM 10 O O5 PEX . . . G 2 100.286 153.213 153.481 1 70.54 ? O5 PEX 801 B 1 HETATM 11 C C5 PEX . . . G 2 98.205 154.016 154.391 1 57.11 ? C5 PEX 801 B 1 HETATM 12 C C6 PEX . . . G 2 98.063 155.516 154.6 1 63.14 ? C6 PEX 801 B 1 HETATM 13 C C7 PEX . . . G 2 97.153 155.851 155.775 1 66.48 ? C7 PEX 801 B 1 HETATM 14 C C8 PEX . . . G 2 97.253 157.312 156.191 1 69.19 ? C8 PEX 801 B 1 HETATM 15 C C9 PEX . . . G 2 98.618 157.687 156.752 1 67.42 ? C9 PEX 801 B 1 HETATM 16 C C10 PEX . . . G 2 98.856 159.192 156.788 1 68.29 ? C10 PEX 801 B 1 HETATM 17 C C11 PEX . . . G 2 98.874 159.831 155.406 1 69.54 ? C11 PEX 801 B 1 HETATM 18 C C12 PEX . . . G 2 99.078 161.341 155.441 1 68.37 ? C12 PEX 801 B 1 HETATM 19 C C13 PEX . . . G 2 99.23 161.949 154.055 1 65.58 ? C13 PEX 801 B 1 HETATM 20 O O6 PEX . . . G 2 98.474 155.399 149.694 1 69.16 ? O6 PEX 801 B 1 HETATM 21 C C14 PEX . . . G 2 97.276 155.813 149.285 1 69.77 ? C14 PEX 801 B 1 HETATM 22 O O7 PEX . . . G 2 96.46 155.089 148.774 1 71.14 ? O7 PEX 801 B 1 HETATM 23 C C15 PEX . . . G 2 97.081 157.283 149.545 1 65.93 ? C15 PEX 801 B 1 HETATM 24 C C16 PEX . . . G 2 96.903 157.631 151.014 1 65.96 ? C16 PEX 801 B 1 HETATM 25 C C17 PEX . . . G 2 95.435 157.735 151.412 1 68.61 ? C17 PEX 801 B 1 HETATM 26 C C18 PEX . . . G 2 94.742 158.959 150.826 1 68.12 ? C18 PEX 801 B 1 HETATM 27 C C19 PEX . . . G 2 93.463 159.335 151.562 1 70.99 ? C19 PEX 801 B 1 HETATM 28 C C20 PEX . . . G 2 92.587 158.136 151.902 1 73.45 ? C20 PEX 801 B 1 HETATM 29 C C21 PEX . . . G 2 91.181 158.518 152.347 1 73.14 ? C21 PEX 801 B 1 HETATM 30 C C22 PEX . . . G 2 90.31 157.315 152.686 1 71.89 ? C22 PEX 801 B 1 HETATM 31 C C23 PEX . . . G 2 88.83 157.656 152.77 1 69.93 ? C23 PEX 801 B 1 HETATM 32 O O8 PEX . . . G 2 99.857 150.005 147.397 1 66.7 ? O8 PEX 801 B 1 HETATM 33 C C24 PEX . . . G 2 100.081 148.994 146.431 1 60.28 ? C24 PEX 801 B 1 HETATM 34 C C25 PEX . . . G 2 101.441 148.363 146.619 1 56.53 ? C25 PEX 801 B 1 HETATM 35 N N1 PEX . . . G 2 101.665 147.255 145.706 1 50.06 ? N1 PEX 801 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #