data_9B74
#
_model_server_result.job_id            XgYLq6ywITR_x0muiasCYg 
_model_server_result.datetime_utc      '2024-11-16 19:30:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9b74 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    9B74 
#
_exptl.entry_id    9B74 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9B74 
_cell.length_a            123.325 
_cell.length_b            123.325 
_cell.length_c            90.714 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9B74 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 95 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf2 A SG CYS 147 H CYS 140 1_555 A SG CYS 203 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 A SG CYS 223 H CYS 216 1_555 B SG CYS 214 L CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf4 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
disulf ? disulf5 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc1 A O LEU 45 H LEU 45 1_555 G NA NA . H NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
metalc ? metalc2 G NA NA . H NA 305 1_555 V O HOH . L HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? 
metalc ? metalc3 B OG SER 26 L SER 26 1_555 S NA NA . L NA 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? 
metalc ? metalc4 B O LEU 201 L LEU 201 1_555 T NA NA . L NA 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.145 ? 
metalc ? metalc5 O OXT ACT . L ACT 306 1_555 R NA NA . L NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.066 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     9B74 
_atom_sites.fract_transf_matrix[1][1]    0.008109 
_atom_sites.fract_transf_matrix[1][2]    0.004682 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009363 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011024 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO H 1 301 301 EDO EDO . 
D 3 EDO H 1 302 303 EDO EDO . 
E 3 EDO H 1 303 305 EDO EDO . 
F 3 EDO H 1 304 307 EDO EDO . 
G 4 NA H 1 305 3 NA NA . 
H 4 NA H 1 306 5 NA NA . 
I 4 NA H 1 307 10 NA NA . 
J 3 EDO L 1 301 301 EDO EDO . 
K 3 EDO L 1 302 303 EDO EDO . 
L 3 EDO L 1 303 304 EDO EDO . 
M 3 EDO L 1 304 305 EDO EDO . 
N 5 ACT L 1 305 307 ACT ACT . 
O 5 ACT L 1 306 308 ACT ACT . 
P 5 ACT L 1 307 309 ACT ACT . 
Q 4 NA L 1 308 2 NA NA . 
R 4 NA L 1 309 7 NA NA . 
S 4 NA L 1 310 8 NA NA . 
T 4 NA L 1 311 11 NA NA . 
U 6 HOH H 1 401 37 HOH HOH . 
U 6 HOH H 2 402 70 HOH HOH . 
U 6 HOH H 3 403 52 HOH HOH . 
U 6 HOH H 4 404 74 HOH HOH . 
U 6 HOH H 5 405 31 HOH HOH . 
U 6 HOH H 6 406 2 HOH HOH . 
U 6 HOH H 7 407 14 HOH HOH . 
U 6 HOH H 8 408 141 HOH HOH . 
U 6 HOH H 9 409 26 HOH HOH . 
U 6 HOH H 10 410 219 HOH HOH . 
U 6 HOH H 11 411 149 HOH HOH . 
U 6 HOH H 12 412 7 HOH HOH . 
U 6 HOH H 13 413 144 HOH HOH . 
U 6 HOH H 14 414 189 HOH HOH . 
U 6 HOH H 15 415 27 HOH HOH . 
U 6 HOH H 16 416 158 HOH HOH . 
U 6 HOH H 17 417 32 HOH HOH . 
U 6 HOH H 18 418 3 HOH HOH . 
U 6 HOH H 19 419 1 HOH HOH . 
U 6 HOH H 20 420 157 HOH HOH . 
U 6 HOH H 21 421 80 HOH HOH . 
U 6 HOH H 22 422 34 HOH HOH . 
U 6 HOH H 23 423 73 HOH HOH . 
U 6 HOH H 24 424 153 HOH HOH . 
U 6 HOH H 25 425 166 HOH HOH . 
U 6 HOH H 26 426 49 HOH HOH . 
U 6 HOH H 27 427 146 HOH HOH . 
U 6 HOH H 28 428 50 HOH HOH . 
U 6 HOH H 29 429 8 HOH HOH . 
U 6 HOH H 30 430 63 HOH HOH . 
U 6 HOH H 31 431 78 HOH HOH . 
U 6 HOH H 32 432 76 HOH HOH . 
U 6 HOH H 33 433 148 HOH HOH . 
U 6 HOH H 34 434 116 HOH HOH . 
U 6 HOH H 35 435 21 HOH HOH . 
U 6 HOH H 36 436 118 HOH HOH . 
U 6 HOH H 37 437 102 HOH HOH . 
U 6 HOH H 38 438 223 HOH HOH . 
U 6 HOH H 39 439 29 HOH HOH . 
U 6 HOH H 40 440 137 HOH HOH . 
U 6 HOH H 41 441 119 HOH HOH . 
U 6 HOH H 42 442 13 HOH HOH . 
U 6 HOH H 43 443 57 HOH HOH . 
U 6 HOH H 44 444 218 HOH HOH . 
U 6 HOH H 45 445 150 HOH HOH . 
U 6 HOH H 46 446 187 HOH HOH . 
U 6 HOH H 47 447 45 HOH HOH . 
U 6 HOH H 48 448 66 HOH HOH . 
U 6 HOH H 49 449 81 HOH HOH . 
U 6 HOH H 50 450 40 HOH HOH . 
U 6 HOH H 51 451 123 HOH HOH . 
U 6 HOH H 52 452 83 HOH HOH . 
U 6 HOH H 53 453 18 HOH HOH . 
U 6 HOH H 54 454 221 HOH HOH . 
U 6 HOH H 55 455 61 HOH HOH . 
U 6 HOH H 56 456 129 HOH HOH . 
U 6 HOH H 57 457 147 HOH HOH . 
U 6 HOH H 58 458 135 HOH HOH . 
U 6 HOH H 59 459 136 HOH HOH . 
U 6 HOH H 60 460 110 HOH HOH . 
U 6 HOH H 61 461 128 HOH HOH . 
U 6 HOH H 62 462 65 HOH HOH . 
U 6 HOH H 63 463 127 HOH HOH . 
U 6 HOH H 64 464 43 HOH HOH . 
U 6 HOH H 65 465 77 HOH HOH . 
U 6 HOH H 66 466 85 HOH HOH . 
U 6 HOH H 67 467 182 HOH HOH . 
U 6 HOH H 68 468 106 HOH HOH . 
U 6 HOH H 69 469 22 HOH HOH . 
U 6 HOH H 70 470 154 HOH HOH . 
U 6 HOH H 71 471 62 HOH HOH . 
U 6 HOH H 72 472 10 HOH HOH . 
U 6 HOH H 73 473 71 HOH HOH . 
U 6 HOH H 74 474 89 HOH HOH . 
U 6 HOH H 75 475 206 HOH HOH . 
U 6 HOH H 76 476 125 HOH HOH . 
U 6 HOH H 77 477 47 HOH HOH . 
U 6 HOH H 78 478 172 HOH HOH . 
U 6 HOH H 79 479 197 HOH HOH . 
U 6 HOH H 80 480 164 HOH HOH . 
U 6 HOH H 81 481 58 HOH HOH . 
U 6 HOH H 82 482 36 HOH HOH . 
U 6 HOH H 83 483 213 HOH HOH . 
U 6 HOH H 84 484 114 HOH HOH . 
U 6 HOH H 85 485 170 HOH HOH . 
U 6 HOH H 86 486 186 HOH HOH . 
U 6 HOH H 87 487 168 HOH HOH . 
U 6 HOH H 88 488 220 HOH HOH . 
U 6 HOH H 89 489 169 HOH HOH . 
U 6 HOH H 90 490 205 HOH HOH . 
U 6 HOH H 91 491 140 HOH HOH . 
U 6 HOH H 92 492 67 HOH HOH . 
U 6 HOH H 93 493 212 HOH HOH . 
U 6 HOH H 94 494 179 HOH HOH . 
U 6 HOH H 95 495 156 HOH HOH . 
U 6 HOH H 96 496 174 HOH HOH . 
U 6 HOH H 97 497 176 HOH HOH . 
V 6 HOH L 1 401 222 HOH HOH . 
V 6 HOH L 2 402 38 HOH HOH . 
V 6 HOH L 3 403 183 HOH HOH . 
V 6 HOH L 4 404 79 HOH HOH . 
V 6 HOH L 5 405 11 HOH HOH . 
V 6 HOH L 6 406 44 HOH HOH . 
V 6 HOH L 7 407 30 HOH HOH . 
V 6 HOH L 8 408 91 HOH HOH . 
V 6 HOH L 9 409 39 HOH HOH . 
V 6 HOH L 10 410 93 HOH HOH . 
V 6 HOH L 11 411 33 HOH HOH . 
V 6 HOH L 12 412 191 HOH HOH . 
V 6 HOH L 13 413 104 HOH HOH . 
V 6 HOH L 14 414 23 HOH HOH . 
V 6 HOH L 15 415 98 HOH HOH . 
V 6 HOH L 16 416 35 HOH HOH . 
V 6 HOH L 17 417 162 HOH HOH . 
V 6 HOH L 18 418 60 HOH HOH . 
V 6 HOH L 19 419 17 HOH HOH . 
V 6 HOH L 20 420 103 HOH HOH . 
V 6 HOH L 21 421 64 HOH HOH . 
V 6 HOH L 22 422 159 HOH HOH . 
V 6 HOH L 23 423 99 HOH HOH . 
V 6 HOH L 24 424 20 HOH HOH . 
V 6 HOH L 25 425 96 HOH HOH . 
V 6 HOH L 26 426 9 HOH HOH . 
V 6 HOH L 27 427 120 HOH HOH . 
V 6 HOH L 28 428 111 HOH HOH . 
V 6 HOH L 29 429 117 HOH HOH . 
V 6 HOH L 30 430 25 HOH HOH . 
V 6 HOH L 31 431 4 HOH HOH . 
V 6 HOH L 32 432 109 HOH HOH . 
V 6 HOH L 33 433 202 HOH HOH . 
V 6 HOH L 34 434 167 HOH HOH . 
V 6 HOH L 35 435 59 HOH HOH . 
V 6 HOH L 36 436 15 HOH HOH . 
V 6 HOH L 37 437 115 HOH HOH . 
V 6 HOH L 38 438 48 HOH HOH . 
V 6 HOH L 39 439 6 HOH HOH . 
V 6 HOH L 40 440 24 HOH HOH . 
V 6 HOH L 41 441 113 HOH HOH . 
V 6 HOH L 42 442 28 HOH HOH . 
V 6 HOH L 43 443 124 HOH HOH . 
V 6 HOH L 44 444 5 HOH HOH . 
V 6 HOH L 45 445 87 HOH HOH . 
V 6 HOH L 46 446 16 HOH HOH . 
V 6 HOH L 47 447 75 HOH HOH . 
V 6 HOH L 48 448 178 HOH HOH . 
V 6 HOH L 49 449 101 HOH HOH . 
V 6 HOH L 50 450 19 HOH HOH . 
V 6 HOH L 51 451 207 HOH HOH . 
V 6 HOH L 52 452 155 HOH HOH . 
V 6 HOH L 53 453 138 HOH HOH . 
V 6 HOH L 54 454 171 HOH HOH . 
V 6 HOH L 55 455 86 HOH HOH . 
V 6 HOH L 56 456 100 HOH HOH . 
V 6 HOH L 57 457 12 HOH HOH . 
V 6 HOH L 58 458 126 HOH HOH . 
V 6 HOH L 59 459 188 HOH HOH . 
V 6 HOH L 60 460 131 HOH HOH . 
V 6 HOH L 61 461 145 HOH HOH . 
V 6 HOH L 62 462 55 HOH HOH . 
V 6 HOH L 63 463 51 HOH HOH . 
V 6 HOH L 64 464 142 HOH HOH . 
V 6 HOH L 65 465 177 HOH HOH . 
V 6 HOH L 66 466 130 HOH HOH . 
V 6 HOH L 67 467 90 HOH HOH . 
V 6 HOH L 68 468 216 HOH HOH . 
V 6 HOH L 69 469 105 HOH HOH . 
V 6 HOH L 70 470 192 HOH HOH . 
V 6 HOH L 71 471 165 HOH HOH . 
V 6 HOH L 72 472 69 HOH HOH . 
V 6 HOH L 73 473 122 HOH HOH . 
V 6 HOH L 74 474 112 HOH HOH . 
V 6 HOH L 75 475 95 HOH HOH . 
V 6 HOH L 76 476 185 HOH HOH . 
V 6 HOH L 77 477 173 HOH HOH . 
V 6 HOH L 78 478 108 HOH HOH . 
V 6 HOH L 79 479 190 HOH HOH . 
V 6 HOH L 80 480 92 HOH HOH . 
V 6 HOH L 81 481 97 HOH HOH . 
V 6 HOH L 82 482 88 HOH HOH . 
V 6 HOH L 83 483 132 HOH HOH . 
V 6 HOH L 84 484 53 HOH HOH . 
V 6 HOH L 85 485 224 HOH HOH . 
V 6 HOH L 86 486 46 HOH HOH . 
V 6 HOH L 87 487 133 HOH HOH . 
V 6 HOH L 88 488 107 HOH HOH . 
V 6 HOH L 89 489 41 HOH HOH . 
V 6 HOH L 90 490 143 HOH HOH . 
V 6 HOH L 91 491 134 HOH HOH . 
V 6 HOH L 92 492 42 HOH HOH . 
V 6 HOH L 93 493 217 HOH HOH . 
V 6 HOH L 94 494 72 HOH HOH . 
V 6 HOH L 95 495 181 HOH HOH . 
V 6 HOH L 96 496 84 HOH HOH . 
V 6 HOH L 97 497 68 HOH HOH . 
V 6 HOH L 98 498 54 HOH HOH . 
V 6 HOH L 99 499 214 HOH HOH . 
V 6 HOH L 100 500 184 HOH HOH . 
V 6 HOH L 101 501 210 HOH HOH . 
V 6 HOH L 102 502 180 HOH HOH . 
V 6 HOH L 103 503 160 HOH HOH . 
V 6 HOH L 104 504 163 HOH HOH . 
V 6 HOH L 105 505 82 HOH HOH . 
V 6 HOH L 106 506 151 HOH HOH . 
V 6 HOH L 107 507 152 HOH HOH . 
V 6 HOH L 108 508 121 HOH HOH . 
V 6 HOH L 109 509 175 HOH HOH . 
V 6 HOH L 110 510 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 -49.297 39.688 -8.535 1 38.87 ? C1 EDO 301 H 1 
HETATM 2 O O1 EDO . . . C 3 -50.099 39.677 -7.343 1 42.07 ? O1 EDO 301 H 1 
HETATM 3 C C2 EDO . . . C 3 -47.816 39.784 -8.177 1 36.13 ? C2 EDO 301 H 1 
HETATM 4 O O2 EDO . . . C 3 -47.538 41.013 -7.472 1 37.34 ? O2 EDO 301 H 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#