data_9B97 # _model_server_result.job_id qLg1UCOWRF5z7zDb4rVYCg _model_server_result.datetime_utc '2024-11-23 02:25:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9b97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":711}' # _entry.id 9B97 # _exptl.entry_id 9B97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.942 _cell.angle_gamma 90 _cell.entry_id 9B97 _cell.length_a 202.36 _cell.length_b 52.49 _cell.length_c 76.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9B97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 404.72 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 144 A ASP 123 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc2 A OD1 ASP 146 A ASP 125 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc3 A OD2 ASP 146 A ASP 125 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc4 A OD1 ASP 148 A ASP 127 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc5 A OD2 ASP 148 A ASP 127 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc6 A O VAL 150 A VAL 129 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc7 A OE2 GLU 152 A GLU 131 1_555 K CA CA . A CA 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc8 A OD1 ASN 175 A ASN 154 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc9 A OD2 ASP 177 A ASP 156 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc10 A OD1 ASP 177 A ASP 156 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc11 A OE2 GLU 179 A GLU 158 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc12 A OE2 GLU 179 A GLU 158 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc13 A OD2 ASP 187 A ASP 166 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc14 A O ASP 187 A ASP 166 1_555 J CA CA . A CA 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc15 A OD1 ASP 190 A ASP 169 1_555 J CA CA . A CA 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc16 A O LYS 192 A LYS 171 1_555 J CA CA . A CA 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc17 A OD1 ASP 198 A ASP 177 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc18 A OD1 ASP 201 A ASP 180 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc19 A OD2 ASP 201 A ASP 180 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc20 A OD2 ASP 201 A ASP 180 1_555 I CA CA . A CA 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc21 A OE1 GLU 375 A GLU 354 1_555 L CA CA . A CA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc22 A OD1 ASP 410 A ASP 389 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc23 A O PHE 429 A PHE 408 1_555 L CA CA . A CA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc24 A O LEU 432 A LEU 411 1_555 L CA CA . A CA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc25 A OE1 GLU 433 A GLU 412 1_555 L CA CA . A CA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc26 H CA CA . A CA 707 1_555 M O HOH . A HOH 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc27 J CA CA . A CA 709 1_555 M O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc28 J CA CA . A CA 709 1_555 M O HOH . A HOH 816 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc29 J CA CA . A CA 709 1_555 M O HOH . A HOH 827 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc30 L CA CA . A CA 711 1_555 M O HOH . A HOH 829 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.153 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9B97 _atom_sites.fract_transf_matrix[1][1] 0.004942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001412 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD A 1 701 701 MPD MPD . C 3 A1AJB A 1 702 1 A1AJB PFE . D 4 ACT A 1 703 1 ACT ACT . E 4 ACT A 1 704 2 ACT ACT . F 4 ACT A 1 705 6 ACT ACT . G 4 ACT A 1 706 7 ACT ACT . H 5 CA A 1 707 9000 CA CA . I 5 CA A 1 708 9001 CA CA . J 5 CA A 1 709 9002 CA CA . K 5 CA A 1 710 9003 CA CA . L 5 CA A 1 711 9004 CA CA . M 6 HOH A 1 801 227 HOH HOH . M 6 HOH A 2 802 413 HOH HOH . M 6 HOH A 3 803 90 HOH HOH . M 6 HOH A 4 804 398 HOH HOH . M 6 HOH A 5 805 443 HOH HOH . M 6 HOH A 6 806 59 HOH HOH . M 6 HOH A 7 807 136 HOH HOH . M 6 HOH A 8 808 281 HOH HOH . M 6 HOH A 9 809 67 HOH HOH . M 6 HOH A 10 810 493 HOH HOH . M 6 HOH A 11 811 121 HOH HOH . M 6 HOH A 12 812 29 HOH HOH . M 6 HOH A 13 813 491 HOH HOH . M 6 HOH A 14 814 420 HOH HOH . M 6 HOH A 15 815 489 HOH HOH . M 6 HOH A 16 816 414 HOH HOH . M 6 HOH A 17 817 216 HOH HOH . M 6 HOH A 18 818 54 HOH HOH . M 6 HOH A 19 819 119 HOH HOH . M 6 HOH A 20 820 13 HOH HOH . M 6 HOH A 21 821 62 HOH HOH . M 6 HOH A 22 822 209 HOH HOH . M 6 HOH A 23 823 210 HOH HOH . M 6 HOH A 24 824 120 HOH HOH . M 6 HOH A 25 825 85 HOH HOH . M 6 HOH A 26 826 488 HOH HOH . M 6 HOH A 27 827 415 HOH HOH . M 6 HOH A 28 828 487 HOH HOH . M 6 HOH A 29 829 449 HOH HOH . M 6 HOH A 30 830 35 HOH HOH . M 6 HOH A 31 831 380 HOH HOH . M 6 HOH A 32 832 41 HOH HOH . M 6 HOH A 33 833 255 HOH HOH . M 6 HOH A 34 834 18 HOH HOH . M 6 HOH A 35 835 271 HOH HOH . M 6 HOH A 36 836 94 HOH HOH . M 6 HOH A 37 837 103 HOH HOH . M 6 HOH A 38 838 490 HOH HOH . M 6 HOH A 39 839 454 HOH HOH . M 6 HOH A 40 840 40 HOH HOH . M 6 HOH A 41 841 276 HOH HOH . M 6 HOH A 42 842 219 HOH HOH . M 6 HOH A 43 843 79 HOH HOH . M 6 HOH A 44 844 7 HOH HOH . M 6 HOH A 45 845 155 HOH HOH . M 6 HOH A 46 846 46 HOH HOH . M 6 HOH A 47 847 52 HOH HOH . M 6 HOH A 48 848 23 HOH HOH . M 6 HOH A 49 849 5 HOH HOH . M 6 HOH A 50 850 473 HOH HOH . M 6 HOH A 51 851 15 HOH HOH . M 6 HOH A 52 852 74 HOH HOH . M 6 HOH A 53 853 81 HOH HOH . M 6 HOH A 54 854 455 HOH HOH . M 6 HOH A 55 855 213 HOH HOH . M 6 HOH A 56 856 95 HOH HOH . M 6 HOH A 57 857 201 HOH HOH . M 6 HOH A 58 858 444 HOH HOH . M 6 HOH A 59 859 71 HOH HOH . M 6 HOH A 60 860 457 HOH HOH . M 6 HOH A 61 861 42 HOH HOH . M 6 HOH A 62 862 440 HOH HOH . M 6 HOH A 63 863 25 HOH HOH . M 6 HOH A 64 864 109 HOH HOH . M 6 HOH A 65 865 51 HOH HOH . M 6 HOH A 66 866 476 HOH HOH . M 6 HOH A 67 867 111 HOH HOH . M 6 HOH A 68 868 492 HOH HOH . M 6 HOH A 69 869 433 HOH HOH . M 6 HOH A 70 870 315 HOH HOH . M 6 HOH A 71 871 470 HOH HOH . M 6 HOH A 72 872 50 HOH HOH . M 6 HOH A 73 873 417 HOH HOH . M 6 HOH A 74 874 96 HOH HOH . M 6 HOH A 75 875 63 HOH HOH . M 6 HOH A 76 876 107 HOH HOH . M 6 HOH A 77 877 462 HOH HOH . M 6 HOH A 78 878 22 HOH HOH . M 6 HOH A 79 879 442 HOH HOH . M 6 HOH A 80 880 272 HOH HOH . M 6 HOH A 81 881 70 HOH HOH . M 6 HOH A 82 882 16 HOH HOH . M 6 HOH A 83 883 479 HOH HOH . M 6 HOH A 84 884 4 HOH HOH . M 6 HOH A 85 885 474 HOH HOH . M 6 HOH A 86 886 27 HOH HOH . M 6 HOH A 87 887 128 HOH HOH . M 6 HOH A 88 888 105 HOH HOH . M 6 HOH A 89 889 458 HOH HOH . M 6 HOH A 90 890 20 HOH HOH . M 6 HOH A 91 891 335 HOH HOH . M 6 HOH A 92 892 113 HOH HOH . M 6 HOH A 93 893 228 HOH HOH . M 6 HOH A 94 894 195 HOH HOH . M 6 HOH A 95 895 60 HOH HOH . M 6 HOH A 96 896 141 HOH HOH . M 6 HOH A 97 897 24 HOH HOH . M 6 HOH A 98 898 9 HOH HOH . M 6 HOH A 99 899 66 HOH HOH . M 6 HOH A 100 900 467 HOH HOH . M 6 HOH A 101 901 104 HOH HOH . M 6 HOH A 102 902 2 HOH HOH . M 6 HOH A 103 903 43 HOH HOH . M 6 HOH A 104 904 212 HOH HOH . M 6 HOH A 105 905 86 HOH HOH . M 6 HOH A 106 906 152 HOH HOH . M 6 HOH A 107 907 88 HOH HOH . M 6 HOH A 108 908 115 HOH HOH . M 6 HOH A 109 909 456 HOH HOH . M 6 HOH A 110 910 57 HOH HOH . M 6 HOH A 111 911 33 HOH HOH . M 6 HOH A 112 912 430 HOH HOH . M 6 HOH A 113 913 475 HOH HOH . M 6 HOH A 114 914 47 HOH HOH . M 6 HOH A 115 915 465 HOH HOH . M 6 HOH A 116 916 306 HOH HOH . M 6 HOH A 117 917 459 HOH HOH . M 6 HOH A 118 918 461 HOH HOH . M 6 HOH A 119 919 38 HOH HOH . M 6 HOH A 120 920 31 HOH HOH . M 6 HOH A 121 921 482 HOH HOH . M 6 HOH A 122 922 68 HOH HOH . M 6 HOH A 123 923 190 HOH HOH . M 6 HOH A 124 924 53 HOH HOH . M 6 HOH A 125 925 416 HOH HOH . M 6 HOH A 126 926 108 HOH HOH . M 6 HOH A 127 927 82 HOH HOH . M 6 HOH A 128 928 452 HOH HOH . M 6 HOH A 129 929 215 HOH HOH . M 6 HOH A 130 930 441 HOH HOH . M 6 HOH A 131 931 205 HOH HOH . M 6 HOH A 132 932 170 HOH HOH . M 6 HOH A 133 933 238 HOH HOH . M 6 HOH A 134 934 259 HOH HOH . M 6 HOH A 135 935 468 HOH HOH . M 6 HOH A 136 936 466 HOH HOH . M 6 HOH A 137 937 372 HOH HOH . M 6 HOH A 138 938 92 HOH HOH . M 6 HOH A 139 939 460 HOH HOH . M 6 HOH A 140 940 377 HOH HOH . M 6 HOH A 141 941 339 HOH HOH . M 6 HOH A 142 942 159 HOH HOH . M 6 HOH A 143 943 486 HOH HOH . M 6 HOH A 144 944 478 HOH HOH . M 6 HOH A 145 945 56 HOH HOH . M 6 HOH A 146 946 484 HOH HOH . M 6 HOH A 147 947 45 HOH HOH . M 6 HOH A 148 948 469 HOH HOH . M 6 HOH A 149 949 471 HOH HOH . M 6 HOH A 150 950 480 HOH HOH . M 6 HOH A 151 951 168 HOH HOH . M 6 HOH A 152 952 453 HOH HOH . M 6 HOH A 153 953 12 HOH HOH . M 6 HOH A 154 954 14 HOH HOH . M 6 HOH A 155 955 125 HOH HOH . M 6 HOH A 156 956 483 HOH HOH . M 6 HOH A 157 957 485 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 219.605 _atom_site.Cartn_y -5.889 _atom_site.Cartn_z 21.79 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.39 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 711 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #