data_9B98 # _model_server_result.job_id 6nizz3pXhF7HWCdonHQT-w _model_server_result.datetime_utc '2024-10-16 10:28:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9b98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 9B98 # _exptl.entry_id 9B98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.709 _cell.angle_gamma 90 _cell.entry_id 9B98 _cell.length_a 201.71 _cell.length_b 52.78 _cell.length_c 76.59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9B98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 403.42 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 144 A ASP 123 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc2 A OD1 ASP 146 A ASP 125 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc3 A OD2 ASP 146 A ASP 125 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc4 A OD1 ASP 148 A ASP 127 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc5 A O VAL 150 A VAL 129 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc6 A OE2 GLU 152 A GLU 131 1_555 G CA CA . A CA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc7 A OD1 ASN 175 A ASN 154 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc8 A OD2 ASP 177 A ASP 156 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc9 A OD1 ASP 177 A ASP 156 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc10 A OE1 GLU 179 A GLU 158 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? metalc ? metalc11 A OE2 GLU 179 A GLU 158 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc12 A OE2 GLU 179 A GLU 158 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc13 A OD2 ASP 187 A ASP 166 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc14 A O ASP 187 A ASP 166 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc15 A OD1 ASP 190 A ASP 169 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc16 A O LYS 192 A LYS 171 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 A OD1 ASP 198 A ASP 177 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc18 A OD1 ASP 201 A ASP 180 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc19 A OD2 ASP 201 A ASP 180 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc20 A OD2 ASP 201 A ASP 180 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc21 A OE1 GLN 371 A GLN 350 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc22 A OE1 GLU 375 A GLU 354 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc23 A OD1 ASP 410 A ASP 389 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc24 A O PHE 429 A PHE 408 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc25 A O LEU 432 A LEU 411 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc26 A OE1 GLU 433 A GLU 412 1_555 H CA CA . A CA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc27 D CA CA . A CA 703 1_555 J O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc28 F CA CA . A CA 705 1_555 J O HOH . A HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.004 ? metalc ? metalc29 F CA CA . A CA 705 1_555 J O HOH . A HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc30 F CA CA . A CA 705 1_555 J O HOH . A HOH 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc31 F CA CA . A CA 705 1_555 J O HOH . A HOH 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc32 G CA CA . A CA 706 1_555 J O HOH . A HOH 863 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc33 H CA CA . A CA 707 1_555 J O HOH . A HOH 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9B98 _atom_sites.fract_transf_matrix[1][1] 0.004958 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001394 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 701 1 ACT ACT . C 2 ACT A 1 702 2 ACT ACT . D 3 CA A 1 703 9000 CA CA . E 3 CA A 1 704 9001 CA CA . F 3 CA A 1 705 9002 CA CA . G 3 CA A 1 706 9003 CA CA . H 3 CA A 1 707 9004 CA CA . I 4 A1AJC A 1 708 701 A1AJC PFE . J 5 HOH A 1 801 504 HOH HOH . J 5 HOH A 2 802 444 HOH HOH . J 5 HOH A 3 803 558 HOH HOH . J 5 HOH A 4 804 500 HOH HOH . J 5 HOH A 5 805 519 HOH HOH . J 5 HOH A 6 806 465 HOH HOH . J 5 HOH A 7 807 502 HOH HOH . J 5 HOH A 8 808 457 HOH HOH . J 5 HOH A 9 809 523 HOH HOH . J 5 HOH A 10 810 581 HOH HOH . J 5 HOH A 11 811 533 HOH HOH . J 5 HOH A 12 812 463 HOH HOH . J 5 HOH A 13 813 483 HOH HOH . J 5 HOH A 14 814 459 HOH HOH . J 5 HOH A 15 815 466 HOH HOH . J 5 HOH A 16 816 480 HOH HOH . J 5 HOH A 17 817 467 HOH HOH . J 5 HOH A 18 818 534 HOH HOH . J 5 HOH A 19 819 578 HOH HOH . J 5 HOH A 20 820 479 HOH HOH . J 5 HOH A 21 821 491 HOH HOH . J 5 HOH A 22 822 458 HOH HOH . J 5 HOH A 23 823 522 HOH HOH . J 5 HOH A 24 824 556 HOH HOH . J 5 HOH A 25 825 499 HOH HOH . J 5 HOH A 26 826 563 HOH HOH . J 5 HOH A 27 827 553 HOH HOH . J 5 HOH A 28 828 477 HOH HOH . J 5 HOH A 29 829 511 HOH HOH . J 5 HOH A 30 830 442 HOH HOH . J 5 HOH A 31 831 573 HOH HOH . J 5 HOH A 32 832 452 HOH HOH . J 5 HOH A 33 833 128 HOH HOH . J 5 HOH A 34 834 561 HOH HOH . J 5 HOH A 35 835 525 HOH HOH . J 5 HOH A 36 836 498 HOH HOH . J 5 HOH A 37 837 76 HOH HOH . J 5 HOH A 38 838 536 HOH HOH . J 5 HOH A 39 839 494 HOH HOH . J 5 HOH A 40 840 541 HOH HOH . J 5 HOH A 41 841 526 HOH HOH . J 5 HOH A 42 842 134 HOH HOH . J 5 HOH A 43 843 535 HOH HOH . J 5 HOH A 44 844 461 HOH HOH . J 5 HOH A 45 845 486 HOH HOH . J 5 HOH A 46 846 521 HOH HOH . J 5 HOH A 47 847 528 HOH HOH . J 5 HOH A 48 848 539 HOH HOH . J 5 HOH A 49 849 453 HOH HOH . J 5 HOH A 50 850 476 HOH HOH . J 5 HOH A 51 851 366 HOH HOH . J 5 HOH A 52 852 571 HOH HOH . J 5 HOH A 53 853 487 HOH HOH . J 5 HOH A 54 854 562 HOH HOH . J 5 HOH A 55 855 546 HOH HOH . J 5 HOH A 56 856 454 HOH HOH . J 5 HOH A 57 857 542 HOH HOH . J 5 HOH A 58 858 565 HOH HOH . J 5 HOH A 59 859 572 HOH HOH . J 5 HOH A 60 860 93 HOH HOH . J 5 HOH A 61 861 567 HOH HOH . J 5 HOH A 62 862 121 HOH HOH . J 5 HOH A 63 863 470 HOH HOH . J 5 HOH A 64 864 7 HOH HOH . J 5 HOH A 65 865 276 HOH HOH . J 5 HOH A 66 866 516 HOH HOH . J 5 HOH A 67 867 206 HOH HOH . J 5 HOH A 68 868 492 HOH HOH . J 5 HOH A 69 869 509 HOH HOH . J 5 HOH A 70 870 555 HOH HOH . J 5 HOH A 71 871 462 HOH HOH . J 5 HOH A 72 872 460 HOH HOH . J 5 HOH A 73 873 473 HOH HOH . J 5 HOH A 74 874 510 HOH HOH . J 5 HOH A 75 875 247 HOH HOH . J 5 HOH A 76 876 547 HOH HOH . J 5 HOH A 77 877 471 HOH HOH . J 5 HOH A 78 878 564 HOH HOH . J 5 HOH A 79 879 503 HOH HOH . J 5 HOH A 80 880 159 HOH HOH . J 5 HOH A 81 881 472 HOH HOH . J 5 HOH A 82 882 468 HOH HOH . J 5 HOH A 83 883 456 HOH HOH . J 5 HOH A 84 884 482 HOH HOH . J 5 HOH A 85 885 96 HOH HOH . J 5 HOH A 86 886 566 HOH HOH . J 5 HOH A 87 887 554 HOH HOH . J 5 HOH A 88 888 550 HOH HOH . J 5 HOH A 89 889 416 HOH HOH . J 5 HOH A 90 890 505 HOH HOH . J 5 HOH A 91 891 485 HOH HOH . J 5 HOH A 92 892 569 HOH HOH . J 5 HOH A 93 893 527 HOH HOH . J 5 HOH A 94 894 455 HOH HOH . J 5 HOH A 95 895 489 HOH HOH . J 5 HOH A 96 896 529 HOH HOH . J 5 HOH A 97 897 228 HOH HOH . J 5 HOH A 98 898 506 HOH HOH . J 5 HOH A 99 899 57 HOH HOH . J 5 HOH A 100 900 497 HOH HOH . J 5 HOH A 101 901 517 HOH HOH . J 5 HOH A 102 902 469 HOH HOH . J 5 HOH A 103 903 538 HOH HOH . J 5 HOH A 104 904 507 HOH HOH . J 5 HOH A 105 905 255 HOH HOH . J 5 HOH A 106 906 531 HOH HOH . J 5 HOH A 107 907 549 HOH HOH . J 5 HOH A 108 908 496 HOH HOH . J 5 HOH A 109 909 543 HOH HOH . J 5 HOH A 110 910 478 HOH HOH . J 5 HOH A 111 911 195 HOH HOH . J 5 HOH A 112 912 548 HOH HOH . J 5 HOH A 113 913 540 HOH HOH . J 5 HOH A 114 914 501 HOH HOH . J 5 HOH A 115 915 490 HOH HOH . J 5 HOH A 116 916 484 HOH HOH . J 5 HOH A 117 917 474 HOH HOH . J 5 HOH A 118 918 544 HOH HOH . J 5 HOH A 119 919 560 HOH HOH . J 5 HOH A 120 920 475 HOH HOH . J 5 HOH A 121 921 190 HOH HOH . J 5 HOH A 122 922 108 HOH HOH . J 5 HOH A 123 923 441 HOH HOH . J 5 HOH A 124 924 545 HOH HOH . J 5 HOH A 125 925 552 HOH HOH . J 5 HOH A 126 926 559 HOH HOH . J 5 HOH A 127 927 557 HOH HOH . J 5 HOH A 128 928 225 HOH HOH . J 5 HOH A 129 929 551 HOH HOH . J 5 HOH A 130 930 577 HOH HOH . J 5 HOH A 131 931 568 HOH HOH . J 5 HOH A 132 932 579 HOH HOH . J 5 HOH A 133 933 520 HOH HOH . J 5 HOH A 134 934 513 HOH HOH . J 5 HOH A 135 935 530 HOH HOH . J 5 HOH A 136 936 580 HOH HOH . J 5 HOH A 137 937 488 HOH HOH . J 5 HOH A 138 938 574 HOH HOH . J 5 HOH A 139 939 576 HOH HOH . J 5 HOH A 140 940 518 HOH HOH . J 5 HOH A 141 941 14 HOH HOH . J 5 HOH A 142 942 168 HOH HOH . J 5 HOH A 143 943 493 HOH HOH . J 5 HOH A 144 944 508 HOH HOH . J 5 HOH A 145 945 570 HOH HOH . J 5 HOH A 146 946 575 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 190.283 _atom_site.Cartn_y -12.957 _atom_site.Cartn_z 24.59 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.77 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 705 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #