data_9BAV
#
_model_server_result.job_id            30xxahCfmVKA5C5ZLF8Vug 
_model_server_result.datetime_utc      '2025-08-29 01:23:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9bav 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":602}' 
#
_entry.id    9BAV 
#
_exptl.entry_id    9BAV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9BAV 
_cell.length_a            66.229 
_cell.length_b            92.87 
_cell.length_c            176.478 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9BAV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 J N N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 A1APB A1APD C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 A1APC A1APB C1 O1 . O3 HO3 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n C A1APD 1 C 1 A1APD B 601 LN4 
2 n C A1APB 2 C 2 A1APB B 601 LN4 
2 n C A1APC 3 C 3 A1APC B 601 LN4 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O4 A1APD . C A1APD 1 1_555 C C1 A1APB . C A1APB 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.412 ? 
covale ? covale2 C O3 A1APB . C A1APB 2 1_555 C C1 A1APC . C A1APC 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.416 ? 
metalc ? metalc1 A OD1 ASP 41 A ASP 44 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc2 A OD1 ASP 42 A ASP 45 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc3 A OD1 ASP 330 A ASP 333 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? 
metalc ? metalc4 A OD2 ASP 330 A ASP 333 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 A OD1 ASN 331 A ASN 334 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? 
metalc ? metalc6 D O8 G6S . A G6S 601 1_555 E CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc7 B OD1 ASP 41 B ASP 44 1_555 J CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc8 B OD1 ASP 42 B ASP 45 1_555 J CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc9 B OD1 ASP 330 B ASP 333 1_555 J CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? 
metalc ? metalc10 B OD2 ASP 330 B ASP 333 1_555 J CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? 
metalc ? metalc11 B OD1 ASN 331 B ASN 334 1_555 J CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
metalc ? metalc12 J CA CA . B CA 602 1_555 C O1S A1APC . C A1APC 3 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.683 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     9BAV 
_atom_sites.fract_transf_matrix[1][1]    0.015099 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010768 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005666 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 G6S A 1 601 601 G6S G6S . 
E 4 CA A 1 602 3 CA CA . 
F 5 SO4 A 1 603 1 SO4 SO4 . 
G 6 CL A 1 604 2 CL CL . 
H 6 CL A 1 605 3 CL CL . 
I 7 A1APC B 1 601 602 A1APC LN4 . 
J 4 CA B 1 602 2 CA CA . 
K 8 EDO B 1 603 1 EDO EDO . 
L 8 EDO B 1 604 2 EDO EDO . 
M 6 CL B 1 605 1 CL CL . 
N 9 HOH A 1 701 89 HOH HOH . 
N 9 HOH A 2 702 11 HOH HOH . 
N 9 HOH A 3 703 8 HOH HOH . 
N 9 HOH A 4 704 100 HOH HOH . 
N 9 HOH A 5 705 9 HOH HOH . 
N 9 HOH A 6 706 60 HOH HOH . 
N 9 HOH A 7 707 40 HOH HOH . 
N 9 HOH A 8 708 26 HOH HOH . 
N 9 HOH A 9 709 58 HOH HOH . 
N 9 HOH A 10 710 23 HOH HOH . 
N 9 HOH A 11 711 52 HOH HOH . 
N 9 HOH A 12 712 31 HOH HOH . 
N 9 HOH A 13 713 102 HOH HOH . 
N 9 HOH A 14 714 64 HOH HOH . 
N 9 HOH A 15 715 85 HOH HOH . 
N 9 HOH A 16 716 13 HOH HOH . 
N 9 HOH A 17 717 17 HOH HOH . 
N 9 HOH A 18 718 36 HOH HOH . 
N 9 HOH A 19 719 12 HOH HOH . 
N 9 HOH A 20 720 18 HOH HOH . 
N 9 HOH A 21 721 62 HOH HOH . 
N 9 HOH A 22 722 71 HOH HOH . 
N 9 HOH A 23 723 38 HOH HOH . 
N 9 HOH A 24 724 98 HOH HOH . 
N 9 HOH A 25 725 41 HOH HOH . 
N 9 HOH A 26 726 93 HOH HOH . 
N 9 HOH A 27 727 76 HOH HOH . 
N 9 HOH A 28 728 95 HOH HOH . 
N 9 HOH A 29 729 96 HOH HOH . 
N 9 HOH A 30 730 24 HOH HOH . 
N 9 HOH A 31 731 42 HOH HOH . 
N 9 HOH A 32 732 1 HOH HOH . 
N 9 HOH A 33 733 19 HOH HOH . 
N 9 HOH A 34 734 34 HOH HOH . 
N 9 HOH A 35 735 84 HOH HOH . 
N 9 HOH A 36 736 68 HOH HOH . 
N 9 HOH A 37 737 91 HOH HOH . 
N 9 HOH A 38 738 72 HOH HOH . 
N 9 HOH A 39 739 7 HOH HOH . 
N 9 HOH A 40 740 55 HOH HOH . 
N 9 HOH A 41 741 35 HOH HOH . 
N 9 HOH A 42 742 90 HOH HOH . 
N 9 HOH A 43 743 99 HOH HOH . 
N 9 HOH A 44 744 81 HOH HOH . 
N 9 HOH A 45 745 92 HOH HOH . 
N 9 HOH A 46 746 75 HOH HOH . 
N 9 HOH A 47 747 22 HOH HOH . 
N 9 HOH A 48 748 6 HOH HOH . 
N 9 HOH A 49 749 16 HOH HOH . 
O 9 HOH B 1 701 47 HOH HOH . 
O 9 HOH B 2 702 48 HOH HOH . 
O 9 HOH B 3 703 78 HOH HOH . 
O 9 HOH B 4 704 82 HOH HOH . 
O 9 HOH B 5 705 33 HOH HOH . 
O 9 HOH B 6 706 20 HOH HOH . 
O 9 HOH B 7 707 70 HOH HOH . 
O 9 HOH B 8 708 44 HOH HOH . 
O 9 HOH B 9 709 66 HOH HOH . 
O 9 HOH B 10 710 21 HOH HOH . 
O 9 HOH B 11 711 94 HOH HOH . 
O 9 HOH B 12 712 101 HOH HOH . 
O 9 HOH B 13 713 15 HOH HOH . 
O 9 HOH B 14 714 73 HOH HOH . 
O 9 HOH B 15 715 29 HOH HOH . 
O 9 HOH B 16 716 86 HOH HOH . 
O 9 HOH B 17 717 30 HOH HOH . 
O 9 HOH B 18 718 32 HOH HOH . 
O 9 HOH B 19 719 37 HOH HOH . 
O 9 HOH B 20 720 87 HOH HOH . 
O 9 HOH B 21 721 59 HOH HOH . 
O 9 HOH B 22 722 39 HOH HOH . 
O 9 HOH B 23 723 4 HOH HOH . 
O 9 HOH B 24 724 46 HOH HOH . 
O 9 HOH B 25 725 2 HOH HOH . 
O 9 HOH B 26 726 50 HOH HOH . 
O 9 HOH B 27 727 45 HOH HOH . 
O 9 HOH B 28 728 27 HOH HOH . 
O 9 HOH B 29 729 65 HOH HOH . 
O 9 HOH B 30 730 69 HOH HOH . 
O 9 HOH B 31 731 10 HOH HOH . 
O 9 HOH B 32 732 49 HOH HOH . 
O 9 HOH B 33 733 14 HOH HOH . 
O 9 HOH B 34 734 97 HOH HOH . 
O 9 HOH B 35 735 28 HOH HOH . 
O 9 HOH B 36 736 77 HOH HOH . 
O 9 HOH B 37 737 57 HOH HOH . 
O 9 HOH B 38 738 79 HOH HOH . 
O 9 HOH B 39 739 53 HOH HOH . 
O 9 HOH B 40 740 88 HOH HOH . 
O 9 HOH B 41 741 67 HOH HOH . 
O 9 HOH B 42 742 63 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -3.477 
_atom_site.Cartn_y               3.482 
_atom_site.Cartn_z               -23.406 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.01 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           602 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#