data_9BBB
#
_model_server_result.job_id            aQ1K9AS99cWpjKUupJmpdg 
_model_server_result.datetime_utc      '2024-11-22 06:02:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9bbb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    9BBB 
#
_exptl.entry_id    9BBB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9BBB 
_cell.length_a            76.82 
_cell.length_b            101.95 
_cell.length_c            126.22 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9BBB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D 1 1 
A,B,C,D 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_567 x,-y+1,-z+2 1 0 0 0 -1 0 0 0 -1 0 101.95 252.44 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N43 A1APA . A A1APA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 240 n n 
CHA C4D HEM doub 241 n n 
CHA HHA HEM sing 242 n n 
CHB C4A HEM sing 243 n n 
CHB C1B HEM doub 244 n n 
CHB HHB HEM sing 245 n n 
CHC C4B HEM sing 246 n n 
CHC C1C HEM doub 247 n n 
CHC HHC HEM sing 248 n n 
CHD C4C HEM doub 249 n n 
CHD C1D HEM sing 250 n n 
CHD HHD HEM sing 251 n n 
C1A C2A HEM doub 252 n y 
C1A NA HEM sing 253 n y 
C2A C3A HEM sing 254 n y 
C2A CAA HEM sing 255 n n 
C3A C4A HEM doub 256 n y 
C3A CMA HEM sing 257 n n 
C4A NA HEM sing 258 n y 
CMA HMA HEM sing 259 n n 
CMA HMAA HEM sing 260 n n 
CMA HMAB HEM sing 261 n n 
CAA CBA HEM sing 262 n n 
CAA HAA HEM sing 263 n n 
CAA HAAA HEM sing 264 n n 
CBA CGA HEM sing 265 n n 
CBA HBA HEM sing 266 n n 
CBA HBAA HEM sing 267 n n 
CGA O1A HEM doub 268 n n 
CGA O2A HEM sing 269 n n 
C1B C2B HEM sing 270 n n 
C1B NB HEM sing 271 n n 
C2B C3B HEM doub 272 n n 
C2B CMB HEM sing 273 n n 
C3B C4B HEM sing 274 n n 
C3B CAB HEM sing 275 n n 
C4B NB HEM doub 276 n n 
CMB HMB HEM sing 277 n n 
CMB HMBA HEM sing 278 n n 
CMB HMBB HEM sing 279 n n 
CAB CBB HEM doub 280 n n 
CAB HAB HEM sing 281 n n 
CBB HBB HEM sing 282 n n 
CBB HBBA HEM sing 283 n n 
C1C C2C HEM sing 284 n y 
C1C NC HEM sing 285 n y 
C2C C3C HEM doub 286 n y 
C2C CMC HEM sing 287 n n 
C3C C4C HEM sing 288 n y 
C3C CAC HEM sing 289 n n 
C4C NC HEM sing 290 n y 
CMC HMC HEM sing 291 n n 
CMC HMCA HEM sing 292 n n 
CMC HMCB HEM sing 293 n n 
CAC CBC HEM doub 294 n n 
CAC HAC HEM sing 295 n n 
CBC HBC HEM sing 296 n n 
CBC HBCA HEM sing 297 n n 
C1D C2D HEM sing 298 n n 
C1D ND HEM doub 299 n n 
C2D C3D HEM doub 300 n n 
C2D CMD HEM sing 301 n n 
C3D C4D HEM sing 302 n n 
C3D CAD HEM sing 303 n n 
C4D ND HEM sing 304 n n 
CMD HMD HEM sing 305 n n 
CMD HMDA HEM sing 306 n n 
CMD HMDB HEM sing 307 n n 
CAD CBD HEM sing 308 n n 
CAD HAD HEM sing 309 n n 
CAD HADA HEM sing 310 n n 
CBD CGD HEM sing 311 n n 
CBD HBD HEM sing 312 n n 
CBD HBDA HEM sing 313 n n 
CGD O1D HEM doub 314 n n 
CGD O2D HEM sing 315 n n 
O2A H2A HEM sing 316 n n 
O2D H2D HEM sing 317 n n 
FE NA HEM sing 318 n n 
FE NB HEM sing 319 n n 
FE NC HEM sing 320 n n 
FE ND HEM sing 321 n n 
#
_atom_sites.entry_id                     9BBB 
_atom_sites.fract_transf_matrix[1][1]    0.013017 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009809 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007923 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 601 HEM HEM . 
C 3 A1APA A 1 602 600 A1APA CBM . 
D 4 HOH A 1 701 23 HOH HOH . 
D 4 HOH A 2 702 17 HOH HOH . 
D 4 HOH A 3 703 26 HOH HOH . 
D 4 HOH A 4 704 16 HOH HOH . 
D 4 HOH A 5 705 18 HOH HOH . 
D 4 HOH A 6 706 9 HOH HOH . 
D 4 HOH A 7 707 13 HOH HOH . 
D 4 HOH A 8 708 8 HOH HOH . 
D 4 HOH A 9 709 4 HOH HOH . 
D 4 HOH A 10 710 31 HOH HOH . 
D 4 HOH A 11 711 30 HOH HOH . 
D 4 HOH A 12 712 3 HOH HOH . 
D 4 HOH A 13 713 7 HOH HOH . 
D 4 HOH A 14 714 12 HOH HOH . 
D 4 HOH A 15 715 2 HOH HOH . 
D 4 HOH A 16 716 19 HOH HOH . 
D 4 HOH A 17 717 5 HOH HOH . 
D 4 HOH A 18 718 1 HOH HOH . 
D 4 HOH A 19 719 22 HOH HOH . 
D 4 HOH A 20 720 6 HOH HOH . 
D 4 HOH A 21 721 15 HOH HOH . 
D 4 HOH A 22 722 10 HOH HOH . 
D 4 HOH A 23 723 27 HOH HOH . 
D 4 HOH A 24 724 20 HOH HOH . 
D 4 HOH A 25 725 24 HOH HOH . 
D 4 HOH A 26 726 29 HOH HOH . 
D 4 HOH A 27 727 14 HOH HOH . 
D 4 HOH A 28 728 28 HOH HOH . 
D 4 HOH A 29 729 11 HOH HOH . 
D 4 HOH A 30 730 25 HOH HOH . 
D 4 HOH A 31 731 21 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 14.929 31.22 135.608 1 61.4 ? CHA HEM 601 A 1 
HETATM 2 C CHB HEM . . . B 2 15.736 28.351 139.444 1 55.85 ? CHB HEM 601 A 1 
HETATM 3 C CHC HEM . . . B 2 16.422 24.57 136.486 1 63.16 ? CHC HEM 601 A 1 
HETATM 4 C CHD HEM . . . B 2 15.216 27.344 132.69 1 61.31 ? CHD HEM 601 A 1 
HETATM 5 C C1A HEM . . . B 2 15.103 30.781 136.904 1 61.93 ? C1A HEM 601 A 1 
HETATM 6 C C2A HEM . . . B 2 15.02 31.595 138.098 1 58.39 ? C2A HEM 601 A 1 
HETATM 7 C C3A HEM . . . B 2 15.242 30.805 139.152 1 61.34 ? C3A HEM 601 A 1 
HETATM 8 C C4A HEM . . . B 2 15.474 29.459 138.669 1 57.29 ? C4A HEM 601 A 1 
HETATM 9 C CMA HEM . . . B 2 15.247 31.245 140.631 1 52.89 ? CMA HEM 601 A 1 
HETATM 10 C CAA HEM . . . B 2 14.735 33.11 138.135 1 57.22 ? CAA HEM 601 A 1 
HETATM 11 C CBA HEM . . . B 2 13.242 33.36 138.299 1 59.96 ? CBA HEM 601 A 1 
HETATM 12 C CGA HEM . . . B 2 13.005 34.837 138.468 1 60.32 ? CGA HEM 601 A 1 
HETATM 13 O O1A HEM . . . B 2 11.872 35.219 138.858 1 65.63 ? O1A HEM 601 A 1 
HETATM 14 O O2A HEM . . . B 2 13.948 35.632 138.222 1 57.2 ? O2A HEM 601 A 1 
HETATM 15 C C1B HEM . . . B 2 15.982 27.074 138.985 1 55.47 ? C1B HEM 601 A 1 
HETATM 16 C C2B HEM . . . B 2 16.243 25.911 139.809 1 66.74 ? C2B HEM 601 A 1 
HETATM 17 C C3B HEM . . . B 2 16.436 24.856 138.994 1 67.29 ? C3B HEM 601 A 1 
HETATM 18 C C4B HEM . . . B 2 16.299 25.332 137.63 1 60.76 ? C4B HEM 601 A 1 
HETATM 19 C CMB HEM . . . B 2 16.274 25.966 141.354 1 56.78 ? CMB HEM 601 A 1 
HETATM 20 C CAB HEM . . . B 2 16.745 23.372 139.332 1 68.52 ? CAB HEM 601 A 1 
HETATM 21 C CBB HEM . . . B 2 16.835 22.864 140.567 1 74.52 ? CBB HEM 601 A 1 
HETATM 22 C C1C HEM . . . B 2 16.084 24.967 135.207 1 68.61 ? C1C HEM 601 A 1 
HETATM 23 C C2C HEM . . . B 2 15.938 24.104 134.051 1 67.75 ? C2C HEM 601 A 1 
HETATM 24 C C3C HEM . . . B 2 15.598 24.873 132.995 1 69.68 ? C3C HEM 601 A 1 
HETATM 25 C C4C HEM . . . B 2 15.528 26.244 133.461 1 65.05 ? C4C HEM 601 A 1 
HETATM 26 C CMC HEM . . . B 2 16.147 22.574 134.109 1 68.27 ? CMC HEM 601 A 1 
HETATM 27 C CAC HEM . . . B 2 15.323 24.488 131.516 1 67.21 ? CAC HEM 601 A 1 
HETATM 28 C CBC HEM . . . B 2 15.484 23.265 131 1 69.76 ? CBC HEM 601 A 1 
HETATM 29 C C1D HEM . . . B 2 15.074 28.64 133.139 1 59.17 ? C1D HEM 601 A 1 
HETATM 30 C C2D HEM . . . B 2 14.832 29.805 132.315 1 68.54 ? C2D HEM 601 A 1 
HETATM 31 C C3D HEM . . . B 2 14.756 30.874 133.113 1 67.55 ? C3D HEM 601 A 1 
HETATM 32 C C4D HEM . . . B 2 14.939 30.428 134.48 1 62.34 ? C4D HEM 601 A 1 
HETATM 33 C CMD HEM . . . B 2 14.698 29.792 130.778 1 58.21 ? CMD HEM 601 A 1 
HETATM 34 C CAD HEM . . . B 2 14.505 32.33 132.667 1 60.42 ? CAD HEM 601 A 1 
HETATM 35 C CBD HEM . . . B 2 13.017 32.507 132.385 1 64.34 ? CBD HEM 601 A 1 
HETATM 36 C CGD HEM . . . B 2 12.777 33.819 131.682 1 65.74 ? CGD HEM 601 A 1 
HETATM 37 O O1D HEM . . . B 2 11.691 33.981 131.062 1 62.73 ? O1D HEM 601 A 1 
HETATM 38 O O2D HEM . . . B 2 13.672 34.703 131.738 1 59.84 ? O2D HEM 601 A 1 
HETATM 39 N NA HEM . . . B 2 15.381 29.484 137.292 1 61.84 ? NA HEM 601 A 1 
HETATM 40 N NB HEM . . . B 2 16.026 26.684 137.666 1 60.5 ? NB HEM 601 A 1 
HETATM 41 N NC HEM . . . B 2 15.827 26.261 134.806 1 59.8 ? NC HEM 601 A 1 
HETATM 42 N ND HEM . . . B 2 15.131 29.061 134.452 1 63.7 ? ND HEM 601 A 1 
HETATM 43 FE FE HEM . . . B 2 15.54 27.845 136.035 1 49.88 ? FE HEM 601 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           250 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#