data_9BE8 # _model_server_result.job_id 8P5axWQFclqGnEaTotIofA _model_server_result.datetime_utc '2025-04-06 16:46:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9be8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":201}' # _entry.id 9BE8 # _exptl.entry_id 9BE8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9BE8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 274 n n N H TRP sing 275 n n N H2 TRP sing 276 n n CA C TRP sing 277 n n CA CB TRP sing 278 n n CA HA TRP sing 279 n n C O TRP doub 280 n n C OXT TRP sing 281 n n CB CG TRP sing 282 n n CB HB2 TRP sing 283 n n CB HB3 TRP sing 284 n n CG CD1 TRP doub 285 n y CG CD2 TRP sing 286 n y CD1 NE1 TRP sing 287 n y CD1 HD1 TRP sing 288 n n CD2 CE2 TRP doub 289 n y CD2 CE3 TRP sing 290 n y NE1 CE2 TRP sing 291 n y NE1 HE1 TRP sing 292 n n CE2 CZ2 TRP sing 293 n y CE3 CZ3 TRP doub 294 n y CE3 HE3 TRP sing 295 n n CZ2 CH2 TRP doub 296 n y CZ2 HZ2 TRP sing 297 n n CZ3 CH2 TRP sing 298 n y CZ3 HZ3 TRP sing 299 n n CH2 HH2 TRP sing 300 n n OXT HXT TRP sing 301 n n # _atom_sites.entry_id 9BE8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TRP A 1 201 1 TRP UNL . H 2 TRP I 1 201 1 TRP UNL . I 2 TRP L 1 201 1 TRP UNL . J 2 TRP O 1 201 1 TRP UNL . K 2 TRP B 1 201 1 TRP UNL . L 2 TRP F 1 201 1 TRP UNL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . K 2 94.571 85.016 97.655 1 41.71 ? N TRP 201 B 1 HETATM 2 C CA TRP . . . K 2 94.442 86.189 98.511 1 41.71 ? CA TRP 201 B 1 HETATM 3 C C TRP . . . K 2 95.325 87.324 98.002 1 41.71 ? C TRP 201 B 1 HETATM 4 O O TRP . . . K 2 95.005 87.979 97.001 1 41.71 ? O TRP 201 B 1 HETATM 5 C CB TRP . . . K 2 94.81 85.842 99.956 1 41.71 ? CB TRP 201 B 1 HETATM 6 C CG TRP . . . K 2 94.319 86.837 100.966 1 41.71 ? CG TRP 201 B 1 HETATM 7 C CD1 TRP . . . K 2 94.651 88.159 101.042 1 41.71 ? CD1 TRP 201 B 1 HETATM 8 C CD2 TRP . . . K 2 93.425 86.586 102.059 1 41.71 ? CD2 TRP 201 B 1 HETATM 9 N NE1 TRP . . . K 2 94.012 88.748 102.105 1 41.71 ? NE1 TRP 201 B 1 HETATM 10 C CE2 TRP . . . K 2 93.254 87.805 102.746 1 41.71 ? CE2 TRP 201 B 1 HETATM 11 C CE3 TRP . . . K 2 92.75 85.452 102.52 1 41.71 ? CE3 TRP 201 B 1 HETATM 12 C CZ2 TRP . . . K 2 92.437 87.921 103.868 1 41.71 ? CZ2 TRP 201 B 1 HETATM 13 C CZ3 TRP . . . K 2 91.938 85.57 103.636 1 41.71 ? CZ3 TRP 201 B 1 HETATM 14 C CH2 TRP . . . K 2 91.789 86.796 104.296 1 41.71 ? CH2 TRP 201 B 1 HETATM 15 O OXT TRP . . . K 2 96.362 87.597 98.582 1 41.71 ? OXT TRP 201 B 1 HETATM 16 H H TRP . . . K 2 95.213 85.07 97.085 1 34.75 ? H TRP 201 B 1 HETATM 17 H HA TRP . . . K 2 93.521 86.492 98.496 1 34.75 ? HA TRP 201 B 1 HETATM 18 H HB2 TRP . . . K 2 94.423 84.98 100.178 1 34.75 ? HB2 TRP 201 B 1 HETATM 19 H HB3 TRP . . . K 2 95.776 85.797 100.029 1 34.75 ? HB3 TRP 201 B 1 HETATM 20 H HD1 TRP . . . K 2 95.222 88.599 100.454 1 34.75 ? HD1 TRP 201 B 1 HETATM 21 H HE1 TRP . . . K 2 94.078 89.575 102.331 1 34.75 ? HE1 TRP 201 B 1 HETATM 22 H HE3 TRP . . . K 2 92.844 84.635 102.086 1 34.75 ? HE3 TRP 201 B 1 HETATM 23 H HZ2 TRP . . . K 2 92.336 88.734 104.309 1 34.75 ? HZ2 TRP 201 B 1 HETATM 24 H HZ3 TRP . . . K 2 91.483 84.824 103.953 1 34.75 ? HZ3 TRP 201 B 1 HETATM 25 H HH2 TRP . . . K 2 91.237 86.846 105.043 1 34.75 ? HH2 TRP 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 25 #